RNA–Protein interactions for RNA: ENST00000457828.6

LSS-205, Transcript of lanosterol synthase, humanhuman

TSL 1 (best) BASIC

Gene LSS, Length 4,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-205ENST00000457828 DDX10Q13206 875 aaKnown RBP22.92■■□□□ 1.26
LSS-205ENST00000457828 ANP32CO43423 234 aa22.89■■□□□ 1.25
LSS-205ENST00000457828 TSPY4P0CV99 314 aa22.89■■□□□ 1.25
LSS-205ENST00000457828 TSPY10P0CW01 314 aa22.89■■□□□ 1.25
LSS-205ENST00000457828 NESP48681 1621 aa22.86■■□□□ 1.25
LSS-205ENST00000457828 CLSPNQ9HAW4 1339 aa22.86■■□□□ 1.25
LSS-205ENST00000457828 SLC4A1APQ9BWU0 796 aaKnown RBP22.83■■□□□ 1.25
LSS-205ENST00000457828 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.81■■□□□ 1.241e-7■□□□□ 10.3
LSS-205ENST00000457828 HIRIP3Q9BW71 556 aaPredicted RBP22.8■■□□□ 1.24
LSS-205ENST00000457828 SUPT16HQ9Y5B9 1047 aaKnown RBP22.77■■□□□ 1.24
LSS-205ENST00000457828 TRHP20396 242 aaPredicted RBP22.77■■□□□ 1.24
LSS-205ENST00000457828 CFDP1Q9UEE9 299 aaPredicted RBP22.74■■□□□ 1.23
LSS-205ENST00000457828 CHGAP10645 457 aaKnown RBP22.73■■□□□ 1.23
LSS-205ENST00000457828 RUSC2Q8N2Y8 1516 aa22.72■■□□□ 1.23
LSS-205ENST00000457828 RAD54L2Q9Y4B4 1467 aa22.71■■□□□ 1.23
LSS-205ENST00000457828 JPH4Q96JJ6 628 aa22.71■■□□□ 1.23
LSS-205ENST00000457828 FGD5Q6ZNL6 1462 aa22.7■■□□□ 1.22
LSS-205ENST00000457828 CFTRP13569 1480 aa22.69■■□□□ 1.22
LSS-205ENST00000457828 HMGXB3Q12766 1538 aa22.69■■□□□ 1.22
LSS-205ENST00000457828 CARMIL2Q6F5E8 1435 aa22.68■■□□□ 1.22
LSS-205ENST00000457828 RRP7BPQ9NSQ0 103 aa22.67■■□□□ 1.22
LSS-205ENST00000457828 STAG3Q9UJ98 1225 aa22.67■■□□□ 1.22
LSS-205ENST00000457828 OSCARQ8IYS5 282 aa22.65■■□□□ 1.22
LSS-205ENST00000457828 VPS8Q8N3P4 1428 aa22.62■■□□□ 1.21
LSS-205ENST00000457828 RAPGEF2Q9Y4G8 1499 aa22.61■■□□□ 1.21
LSS-205ENST00000457828 AQRO60306 1485 aaKnown RBP eCLIP22.61■■□□□ 1.217e-7■■■■■ 40
LSS-205ENST00000457828 UNC13AQ9UPW8 1703 aa22.61■■□□□ 1.21
LSS-205ENST00000457828 FHAD1B1AJZ9 1412 aa22.6■■□□□ 1.21
LSS-205ENST00000457828 KANK4Q5T7N3 995 aaPredicted RBP22.59■■□□□ 1.21
LSS-205ENST00000457828 GAPVD1Q14C86 1478 aa22.58■■□□□ 1.2
LSS-205ENST00000457828 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
LSS-205ENST00000457828 CYB5RLQ6IPT4 315 aa22.56■■□□□ 1.2
LSS-205ENST00000457828 ARID4BQ4LE39 1312 aaPredicted RBP22.55■■□□□ 1.2
LSS-205ENST00000457828 SIN3AQ96ST3 1273 aa22.54■■□□□ 1.2
LSS-205ENST00000457828 IGF1RP08069 1367 aa22.53■■□□□ 1.2
LSS-205ENST00000457828 IRX6P78412 446 aaPredicted RBP22.53■■□□□ 1.2
LSS-205ENST00000457828 TONSLQ96HA7 1378 aa22.53■■□□□ 1.2
LSS-205ENST00000457828 ANP32EQ9BTT0 268 aa22.52■■□□□ 1.19
LSS-205ENST00000457828 CCNB3Q8WWL7 1395 aa22.48■■□□□ 1.19
LSS-205ENST00000457828 MRC2Q9UBG0 1479 aa22.48■■□□□ 1.19
LSS-205ENST00000457828 FHOD3Q2V2M9 1422 aa22.46■■□□□ 1.19
LSS-205ENST00000457828 TSHZ2Q9NRE2 1034 aa22.42■■□□□ 1.18
LSS-205ENST00000457828 FMN1Q68DA7 1419 aa22.41■■□□□ 1.18
LSS-205ENST00000457828 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
LSS-205ENST00000457828 TOPBP1Q92547 1522 aa22.39■■□□□ 1.18
LSS-205ENST00000457828 FAM9BQ8IZU0 186 aa22.38■■□□□ 1.17
LSS-205ENST00000457828 DHX57Q6P158 1386 aaKnown RBP22.38■■□□□ 1.17
LSS-205ENST00000457828 KDM2AQ9Y2K7 1162 aa22.37■■□□□ 1.17
LSS-205ENST00000457828 PTPRGP23470 1445 aa22.36■■□□□ 1.17
LSS-205ENST00000457828 POLA1P09884 1462 aaPredicted RBP22.33■■□□□ 1.16
LSS-205ENST00000457828 MLECQ14165 292 aa22.32■■□□□ 1.16
LSS-205ENST00000457828 RTL5Q5HYW3 569 aaPredicted RBP22.32■■□□□ 1.16
LSS-205ENST00000457828 GRIN2BQ13224 1484 aa22.32■■□□□ 1.16
LSS-205ENST00000457828 EFCAB2Q5VUJ9 269 aa22.29■■□□□ 1.16
LSS-205ENST00000457828 IFT140Q96RY7 1462 aa22.29■■□□□ 1.16
LSS-205ENST00000457828 SYNJ1O43426 1573 aa22.28■■□□□ 1.16
LSS-205ENST00000457828 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
LSS-205ENST00000457828 CUX1P39880 1505 aa22.27■■□□□ 1.16
LSS-205ENST00000457828 RGL3Q3MIN7 710 aa22.27■■□□□ 1.16
LSS-205ENST00000457828 RAB3GAP2Q9H2M9 1393 aa22.26■■□□□ 1.15
LSS-205ENST00000457828 PEG3Q9GZU2 1588 aa22.24■■□□□ 1.15
LSS-205ENST00000457828 RBM19Q9Y4C8 960 aaKnown RBP22.22■■□□□ 1.15
LSS-205ENST00000457828 PPP1R15AO75807 674 aaPredicted RBP22.2■■□□□ 1.15
LSS-205ENST00000457828 MRS2Q9HD23 443 aa22.2■■□□□ 1.14
LSS-205ENST00000457828 GGT6Q6P531 493 aa22.2■■□□□ 1.14
LSS-205ENST00000457828 DNMBPQ6XZF7 1577 aa22.16■■□□□ 1.14
LSS-205ENST00000457828 DAXXQ9UER7 740 aaPredicted RBP22.15■■□□□ 1.14
LSS-205ENST00000457828 ARHGAP35Q9NRY4 1499 aa22.15■■□□□ 1.14
LSS-205ENST00000457828 SENP3-EIF4A1A0A087X0R7 540 aa22.15■■□□□ 1.14
LSS-205ENST00000457828 SETD5Q9C0A6 1442 aa22.15■■□□□ 1.14
LSS-205ENST00000457828 HNRNPMP52272 730 aaKnown RBP eCLIP22.15■■□□□ 1.143e-7■■■■□ 23.6
LSS-205ENST00000457828 NBR1Q14596 966 aa22.14■■□□□ 1.13
LSS-205ENST00000457828 TOP2BQ02880 1626 aa22.11■■□□□ 1.13
LSS-205ENST00000457828 SNAPC4Q5SXM2 1469 aa22.11■■□□□ 1.13
LSS-205ENST00000457828 EIF4G2P78344 907 aaKnown RBP eCLIP22.1■■□□□ 1.13
LSS-205ENST00000457828 NPM2Q86SE8 214 aaKnown RBP22.1■■□□□ 1.13
LSS-205ENST00000457828 ANP32AP39687 249 aaKnown RBP22.09■■□□□ 1.13
LSS-205ENST00000457828 BCL11AQ9H165 835 aa22.09■■□□□ 1.13
LSS-205ENST00000457828 CCER2I3L3R5 266 aa22.07■■□□□ 1.12
LSS-205ENST00000457828 PRG4Q92954 1404 aaPredicted RBP22.06■■□□□ 1.12
LSS-205ENST00000457828 KIF21BO75037 1637 aa22.06■■□□□ 1.12
LSS-205ENST00000457828 FAM69CQ0P6D2 419 aa22.05■■□□□ 1.12
LSS-205ENST00000457828 URB2Q14146 1524 aaKnown RBP22.05■■□□□ 1.12
LSS-205ENST00000457828 SALL2Q9Y467 1007 aaPredicted RBP22.04■■□□□ 1.12
LSS-205ENST00000457828 CCDC136Q96JN2 1154 aa22.04■■□□□ 1.12
LSS-205ENST00000457828 CCDC18Q5T9S5 1454 aa22.03■■□□□ 1.12
LSS-205ENST00000457828 SPAG9O60271 1321 aaKnown RBP22.01■■□□□ 1.11
LSS-205ENST00000457828 TIMELESSQ9UNS1 1208 aa22.01■■□□□ 1.11
LSS-205ENST00000457828 KIF3BO15066 747 aa22■■□□□ 1.11
LSS-205ENST00000457828 B4GALNT3Q6L9W6 998 aa22■■□□□ 1.11
LSS-205ENST00000457828 C14orf37Q86TY3 774 aa21.99■■□□□ 1.11
LSS-205ENST00000457828 KANK1Q14678 1352 aa21.98■■□□□ 1.11
LSS-205ENST00000457828 ABCA10Q8WWZ4 1543 aa21.97■■□□□ 1.11
LSS-205ENST00000457828 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
LSS-205ENST00000457828 PPP4R2Q9NY27 417 aa21.93■■□□□ 1.1
LSS-205ENST00000457828 PRXQ9BXM0 1461 aa21.93■■□□□ 1.1
LSS-205ENST00000457828 TMC1Q8TDI8 760 aa21.93■■□□□ 1.1
LSS-205ENST00000457828 FOXD1Q16676 465 aa21.92■■□□□ 1.1
LSS-205ENST00000457828 RSPH4AQ5TD94 716 aa21.92■■□□□ 1.1
LSS-205ENST00000457828 PKD2Q13563 968 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms