RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
TOP3B-214ENST00000457270 TRIM52Q96A61 297 aa19.77■□□□□ 0.76
TOP3B-214ENST00000457270 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
TOP3B-214ENST00000457270 ANP32CO43423 234 aa19.76■□□□□ 0.75
TOP3B-214ENST00000457270 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
TOP3B-214ENST00000457270 SETD5Q9C0A6 1442 aa19.72■□□□□ 0.75
TOP3B-214ENST00000457270 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
TOP3B-214ENST00000457270 ERICH6BQ5W0A0 696 aa19.71■□□□□ 0.75
TOP3B-214ENST00000457270 SALL2Q9Y467 1007 aaPredicted RBP19.69■□□□□ 0.74
TOP3B-214ENST00000457270 MAP3K1Q13233 1512 aa19.67■□□□□ 0.74
TOP3B-214ENST00000457270 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
TOP3B-214ENST00000457270 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
TOP3B-214ENST00000457270 CCDC136Q96JN2 1154 aa19.6■□□□□ 0.73
TOP3B-214ENST00000457270 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
TOP3B-214ENST00000457270 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
TOP3B-214ENST00000457270 UBE2Q2Q8WVN8 375 aa19.53■□□□□ 0.72
TOP3B-214ENST00000457270 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
TOP3B-214ENST00000457270 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
TOP3B-214ENST00000457270 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
TOP3B-214ENST00000457270 LRRC9Q6ZRR7 1453 aa19.5■□□□□ 0.71
TOP3B-214ENST00000457270 NBR1Q14596 966 aa19.49■□□□□ 0.71
TOP3B-214ENST00000457270 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
TOP3B-214ENST00000457270 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
TOP3B-214ENST00000457270 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
TOP3B-214ENST00000457270 PHLDB1Q86UU1 1377 aa19.46■□□□□ 0.71
TOP3B-214ENST00000457270 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
TOP3B-214ENST00000457270 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.42■□□□□ 0.7
TOP3B-214ENST00000457270 CFAP43Q8NDM7 1665 aa19.42■□□□□ 0.7
TOP3B-214ENST00000457270 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
TOP3B-214ENST00000457270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.41■□□□□ 0.7
TOP3B-214ENST00000457270 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
TOP3B-214ENST00000457270 RTN4Q9NQC3 1192 aaKnown RBP19.38■□□□□ 0.69
TOP3B-214ENST00000457270 CUX1P39880 1505 aa19.38■□□□□ 0.69
TOP3B-214ENST00000457270 IL27Q8NEV9 243 aa19.38■□□□□ 0.69
TOP3B-214ENST00000457270 FAM50AQ14320 339 aaKnown RBP19.36■□□□□ 0.69
TOP3B-214ENST00000457270 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
TOP3B-214ENST00000457270 RTL5Q5HYW3 569 aaPredicted RBP19.32■□□□□ 0.68
TOP3B-214ENST00000457270 B4GALNT3Q6L9W6 998 aa19.32■□□□□ 0.68
TOP3B-214ENST00000457270 KDM5BQ9UGL1 1544 aa19.32■□□□□ 0.68
TOP3B-214ENST00000457270 NCOA2Q15596 1464 aa19.31■□□□□ 0.68
TOP3B-214ENST00000457270 ZBED9Q6R2W3 1325 aa19.3■□□□□ 0.68
TOP3B-214ENST00000457270 UACAQ9BZF9 1416 aa19.29■□□□□ 0.68
TOP3B-214ENST00000457270 IPO9Q96P70 1041 aaKnown RBP19.27■□□□□ 0.68
TOP3B-214ENST00000457270 CCDC18Q5T9S5 1454 aa19.26■□□□□ 0.67
TOP3B-214ENST00000457270 WASHC2AQ641Q2 1341 aa19.26■□□□□ 0.67
TOP3B-214ENST00000457270 CNTLNQ9NXG0 1405 aa19.25■□□□□ 0.67
TOP3B-214ENST00000457270 PCF11O94913 1555 aaKnown RBP19.25■□□□□ 0.67
TOP3B-214ENST00000457270 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
TOP3B-214ENST00000457270 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
TOP3B-214ENST00000457270 ANP32AP39687 249 aaKnown RBP19.23■□□□□ 0.67
TOP3B-214ENST00000457270 HFM1A2PYH4 1435 aa19.23■□□□□ 0.67
TOP3B-214ENST00000457270 PTPN23Q9H3S7 1636 aa19.2■□□□□ 0.66
TOP3B-214ENST00000457270 IGF1RP08069 1367 aa19.19■□□□□ 0.66
TOP3B-214ENST00000457270 ZBTB47Q9UFB7 747 aaPredicted RBP19.19■□□□□ 0.66
TOP3B-214ENST00000457270 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
TOP3B-214ENST00000457270 FYCO1Q9BQS8 1478 aa19.18■□□□□ 0.66
TOP3B-214ENST00000457270 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
TOP3B-214ENST00000457270 PRKRIP1Q9H875 184 aaPredicted RBP19.17■□□□□ 0.66
TOP3B-214ENST00000457270 FGD6Q6ZV73 1430 aa19.16■□□□□ 0.66
TOP3B-214ENST00000457270 SMG6Q86US8 1419 aaKnown RBP19.16■□□□□ 0.66
TOP3B-214ENST00000457270 RNF123Q5XPI4 1314 aa19.15■□□□□ 0.66
TOP3B-214ENST00000457270 EIF5BO60841 1220 aaKnown RBP19.15■□□□□ 0.66
TOP3B-214ENST00000457270 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.663e-7■■■■■ 34.4
TOP3B-214ENST00000457270 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
TOP3B-214ENST00000457270 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
TOP3B-214ENST00000457270 EIF4G2P78344 907 aaKnown RBP eCLIP19.11■□□□□ 0.65
TOP3B-214ENST00000457270 FAM9BQ8IZU0 186 aa19.11■□□□□ 0.65
TOP3B-214ENST00000457270 MRS2Q9HD23 443 aa19.11■□□□□ 0.65
TOP3B-214ENST00000457270 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
TOP3B-214ENST00000457270 NAIPQ13075 1403 aa19.11■□□□□ 0.65
TOP3B-214ENST00000457270 USP35Q9P2H5 1018 aa19.1■□□□□ 0.65
TOP3B-214ENST00000457270 PTPRKQ15262 1439 aa19.1■□□□□ 0.65
TOP3B-214ENST00000457270 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
TOP3B-214ENST00000457270 CCDC7Q96M83 1385 aa19.09■□□□□ 0.65
TOP3B-214ENST00000457270 CFTRP13569 1480 aa19.08■□□□□ 0.64
TOP3B-214ENST00000457270 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.64
TOP3B-214ENST00000457270 EFCAB5A4FU69 1503 aa19.07■□□□□ 0.64
TOP3B-214ENST00000457270 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
TOP3B-214ENST00000457270 C11orf95C9JLR9 678 aaPredicted RBP19.07■□□□□ 0.64
TOP3B-214ENST00000457270 FMN1Q68DA7 1419 aa19.07■□□□□ 0.64
TOP3B-214ENST00000457270 PKNOX2Q96KN3 472 aa19.07■□□□□ 0.64
TOP3B-214ENST00000457270 AKNAQ7Z591 1439 aa19.05■□□□□ 0.64
TOP3B-214ENST00000457270 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
TOP3B-214ENST00000457270 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
TOP3B-214ENST00000457270 WASHC2CQ9Y4E1 1318 aa19.04■□□□□ 0.64
TOP3B-214ENST00000457270 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
TOP3B-214ENST00000457270 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
TOP3B-214ENST00000457270 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
TOP3B-214ENST00000457270 DENND4BO75064 1496 aaPredicted RBP18.99■□□□□ 0.63
TOP3B-214ENST00000457270 GCC2Q8IWJ2 1684 aa18.97■□□□□ 0.63
TOP3B-214ENST00000457270 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
TOP3B-214ENST00000457270 MYOM3Q5VTT5 1437 aa18.95■□□□□ 0.62
TOP3B-214ENST00000457270 NEFMP07197 916 aa18.95■□□□□ 0.62
TOP3B-214ENST00000457270 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
TOP3B-214ENST00000457270 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
TOP3B-214ENST00000457270 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
TOP3B-214ENST00000457270 TCERG1O14776 1098 aaKnown RBP18.93■□□□□ 0.62
TOP3B-214ENST00000457270 SPATA31E1Q6ZUB1 1445 aa18.93■□□□□ 0.62
TOP3B-214ENST00000457270 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
TOP3B-214ENST00000457270 KIF7Q2M1P5 1343 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms