RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 TOP2BQ02880 1626 aa19.78■□□□□ 0.76
TOP3B-214ENST00000457270 TRIM52Q96A61 297 aa19.77■□□□□ 0.76
TOP3B-214ENST00000457270 CDK11AQ9UQ88 783 aaPredicted RBP19.77■□□□□ 0.76
TOP3B-214ENST00000457270 ANP32CO43423 234 aa19.76■□□□□ 0.75
TOP3B-214ENST00000457270 UNC13AQ9UPW8 1703 aa19.76■□□□□ 0.75
TOP3B-214ENST00000457270 SETD5Q9C0A6 1442 aa19.72■□□□□ 0.75
TOP3B-214ENST00000457270 BIVM-ERCC5R4GMW8 1640 aa19.71■□□□□ 0.75
TOP3B-214ENST00000457270 ERICH6BQ5W0A0 696 aa19.71■□□□□ 0.75
TOP3B-214ENST00000457270 SALL2Q9Y467 1007 aaPredicted RBP19.69■□□□□ 0.74
TOP3B-214ENST00000457270 MAP3K1Q13233 1512 aa19.67■□□□□ 0.74
TOP3B-214ENST00000457270 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
TOP3B-214ENST00000457270 SIN3AQ96ST3 1273 aa19.61■□□□□ 0.73
TOP3B-214ENST00000457270 CCDC136Q96JN2 1154 aa19.6■□□□□ 0.73
TOP3B-214ENST00000457270 TIAM1Q13009 1591 aa19.59■□□□□ 0.73
TOP3B-214ENST00000457270 PPP4R2Q9NY27 417 aa19.57■□□□□ 0.72
TOP3B-214ENST00000457270 UBE2Q2Q8WVN8 375 aa19.53■□□□□ 0.72
TOP3B-214ENST00000457270 HNRNPUQ00839 825 aaKnown RBP eCLIP19.51■□□□□ 0.71
TOP3B-214ENST00000457270 ATAD2BQ9ULI0 1458 aa19.5■□□□□ 0.71
TOP3B-214ENST00000457270 HIRIP3Q9BW71 556 aaPredicted RBP19.5■□□□□ 0.71
TOP3B-214ENST00000457270 LRRC9Q6ZRR7 1453 aa19.5■□□□□ 0.71
TOP3B-214ENST00000457270 NBR1Q14596 966 aa19.49■□□□□ 0.71
TOP3B-214ENST00000457270 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
TOP3B-214ENST00000457270 KIF27Q86VH2 1401 aa19.48■□□□□ 0.71
TOP3B-214ENST00000457270 NOP58Q9Y2X3 529 aaKnown RBP19.47■□□□□ 0.71
TOP3B-214ENST00000457270 PHLDB1Q86UU1 1377 aa19.46■□□□□ 0.71
TOP3B-214ENST00000457270 BICRAQ9NZM4 1560 aa19.45■□□□□ 0.7
TOP3B-214ENST00000457270 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.42■□□□□ 0.7
TOP3B-214ENST00000457270 CFAP43Q8NDM7 1665 aa19.42■□□□□ 0.7
TOP3B-214ENST00000457270 FHAD1B1AJZ9 1412 aa19.41■□□□□ 0.7
TOP3B-214ENST00000457270 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.41■□□□□ 0.7
TOP3B-214ENST00000457270 TONSLQ96HA7 1378 aa19.41■□□□□ 0.7
TOP3B-214ENST00000457270 RTN4Q9NQC3 1192 aaKnown RBP19.38■□□□□ 0.69
TOP3B-214ENST00000457270 CUX1P39880 1505 aa19.38■□□□□ 0.69
TOP3B-214ENST00000457270 IL27Q8NEV9 243 aa19.38■□□□□ 0.69
TOP3B-214ENST00000457270 FAM50AQ14320 339 aaKnown RBP19.36■□□□□ 0.69
TOP3B-214ENST00000457270 PAK3O75914 559 aaPredicted RBP19.34■□□□□ 0.69
TOP3B-214ENST00000457270 RTL5Q5HYW3 569 aaPredicted RBP19.32■□□□□ 0.68
TOP3B-214ENST00000457270 B4GALNT3Q6L9W6 998 aa19.32■□□□□ 0.68
TOP3B-214ENST00000457270 KDM5BQ9UGL1 1544 aa19.32■□□□□ 0.68
TOP3B-214ENST00000457270 NCOA2Q15596 1464 aa19.31■□□□□ 0.68
TOP3B-214ENST00000457270 ZBED9Q6R2W3 1325 aa19.3■□□□□ 0.68
TOP3B-214ENST00000457270 UACAQ9BZF9 1416 aa19.29■□□□□ 0.68
TOP3B-214ENST00000457270 IPO9Q96P70 1041 aaKnown RBP19.27■□□□□ 0.68
TOP3B-214ENST00000457270 CCDC18Q5T9S5 1454 aa19.26■□□□□ 0.67
TOP3B-214ENST00000457270 WASHC2AQ641Q2 1341 aa19.26■□□□□ 0.67
TOP3B-214ENST00000457270 CNTLNQ9NXG0 1405 aa19.25■□□□□ 0.67
TOP3B-214ENST00000457270 PCF11O94913 1555 aaKnown RBP19.25■□□□□ 0.67
TOP3B-214ENST00000457270 PABPN1Q86U42 306 aaKnown RBP eCLIP19.24■□□□□ 0.67
TOP3B-214ENST00000457270 NCAPD3P42695 1498 aa19.24■□□□□ 0.67
TOP3B-214ENST00000457270 ANP32AP39687 249 aaKnown RBP19.23■□□□□ 0.67
TOP3B-214ENST00000457270 HFM1A2PYH4 1435 aa19.23■□□□□ 0.67
TOP3B-214ENST00000457270 PTPN23Q9H3S7 1636 aa19.2■□□□□ 0.66
TOP3B-214ENST00000457270 IGF1RP08069 1367 aa19.19■□□□□ 0.66
TOP3B-214ENST00000457270 ZBTB47Q9UFB7 747 aaPredicted RBP19.19■□□□□ 0.66
TOP3B-214ENST00000457270 CCDC184Q52MB2 194 aa19.18■□□□□ 0.66
TOP3B-214ENST00000457270 FYCO1Q9BQS8 1478 aa19.18■□□□□ 0.66
TOP3B-214ENST00000457270 HSPA5P11021 654 aaKnown RBP19.17■□□□□ 0.66
TOP3B-214ENST00000457270 PRKRIP1Q9H875 184 aaPredicted RBP19.17■□□□□ 0.66
TOP3B-214ENST00000457270 FGD6Q6ZV73 1430 aa19.16■□□□□ 0.66
TOP3B-214ENST00000457270 SMG6Q86US8 1419 aaKnown RBP19.16■□□□□ 0.66
TOP3B-214ENST00000457270 RNF123Q5XPI4 1314 aa19.15■□□□□ 0.66
TOP3B-214ENST00000457270 EIF5BO60841 1220 aaKnown RBP19.15■□□□□ 0.66
TOP3B-214ENST00000457270 AQRO60306 1485 aaKnown RBP eCLIP19.15■□□□□ 0.663e-7■■■■■ 34.4
TOP3B-214ENST00000457270 NCOA1Q15788 1441 aa19.12■□□□□ 0.65
TOP3B-214ENST00000457270 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
TOP3B-214ENST00000457270 EIF4G2P78344 907 aaKnown RBP eCLIP19.11■□□□□ 0.65
TOP3B-214ENST00000457270 FAM9BQ8IZU0 186 aa19.11■□□□□ 0.65
TOP3B-214ENST00000457270 MRS2Q9HD23 443 aa19.11■□□□□ 0.65
TOP3B-214ENST00000457270 CASKIN1Q8WXD9 1431 aa19.11■□□□□ 0.65
TOP3B-214ENST00000457270 NAIPQ13075 1403 aa19.11■□□□□ 0.65
TOP3B-214ENST00000457270 USP35Q9P2H5 1018 aa19.1■□□□□ 0.65
TOP3B-214ENST00000457270 PTPRKQ15262 1439 aa19.1■□□□□ 0.65
TOP3B-214ENST00000457270 FGD5Q6ZNL6 1462 aa19.09■□□□□ 0.65
TOP3B-214ENST00000457270 CCDC7Q96M83 1385 aa19.09■□□□□ 0.65
TOP3B-214ENST00000457270 CFTRP13569 1480 aa19.08■□□□□ 0.64
TOP3B-214ENST00000457270 ABCA5Q8WWZ7 1642 aa19.08■□□□□ 0.64
TOP3B-214ENST00000457270 EFCAB5A4FU69 1503 aa19.07■□□□□ 0.64
TOP3B-214ENST00000457270 HMGXB3Q12766 1538 aa19.07■□□□□ 0.64
TOP3B-214ENST00000457270 C11orf95C9JLR9 678 aaPredicted RBP19.07■□□□□ 0.64
TOP3B-214ENST00000457270 FMN1Q68DA7 1419 aa19.07■□□□□ 0.64
TOP3B-214ENST00000457270 PKNOX2Q96KN3 472 aa19.07■□□□□ 0.64
TOP3B-214ENST00000457270 AKNAQ7Z591 1439 aa19.05■□□□□ 0.64
TOP3B-214ENST00000457270 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
TOP3B-214ENST00000457270 NUDCQ9Y266 331 aa19.04■□□□□ 0.64
TOP3B-214ENST00000457270 WASHC2CQ9Y4E1 1318 aa19.04■□□□□ 0.64
TOP3B-214ENST00000457270 HECW1Q76N89 1606 aa19.04■□□□□ 0.64
TOP3B-214ENST00000457270 PRDM2Q13029 1718 aa19.01■□□□□ 0.63
TOP3B-214ENST00000457270 FHOD3Q2V2M9 1422 aa19■□□□□ 0.63
TOP3B-214ENST00000457270 DENND4BO75064 1496 aaPredicted RBP18.99■□□□□ 0.63
TOP3B-214ENST00000457270 GCC2Q8IWJ2 1684 aa18.97■□□□□ 0.63
TOP3B-214ENST00000457270 ATP1B4Q9UN42 357 aaPredicted RBP18.96■□□□□ 0.63
TOP3B-214ENST00000457270 MYOM3Q5VTT5 1437 aa18.95■□□□□ 0.62
TOP3B-214ENST00000457270 NEFMP07197 916 aa18.95■□□□□ 0.62
TOP3B-214ENST00000457270 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
TOP3B-214ENST00000457270 SNAPC4Q5SXM2 1469 aa18.94■□□□□ 0.62
TOP3B-214ENST00000457270 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
TOP3B-214ENST00000457270 TCERG1O14776 1098 aaKnown RBP18.93■□□□□ 0.62
TOP3B-214ENST00000457270 SPATA31E1Q6ZUB1 1445 aa18.93■□□□□ 0.62
TOP3B-214ENST00000457270 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
TOP3B-214ENST00000457270 KIF7Q2M1P5 1343 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms