RNA–Protein interactions for RNA: ENST00000457270.5

TOP3B-214, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 2,956 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-214ENST00000457270 NISCHQ9Y2I1 1504 aa26.81■■□□□ 1.88
TOP3B-214ENST00000457270 HRCP23327 699 aa23.9■■□□□ 1.42
TOP3B-214ENST00000457270 PELP1Q8IZL8 1130 aaKnown RBP23.65■■□□□ 1.38
TOP3B-214ENST00000457270 SHROOM4Q9ULL8 1493 aa23.35■■□□□ 1.33
TOP3B-214ENST00000457270 SUPT5HO00267 1087 aaKnown RBP23.28■■□□□ 1.32
TOP3B-214ENST00000457270 MYO15BQ96JP2 1530 aa23.28■■□□□ 1.32
TOP3B-214ENST00000457270 PCGF6Q9BYE7 350 aa23.22■■□□□ 1.31
TOP3B-214ENST00000457270 PPARGC1BQ86YN6 1023 aaKnown RBP23.16■■□□□ 1.3
TOP3B-214ENST00000457270 CHIC1Q5VXU3 224 aa23.13■■□□□ 1.29
TOP3B-214ENST00000457270 DCAF1Q9Y4B6 1507 aa23.02■■□□□ 1.28
TOP3B-214ENST00000457270 MYT1Q01538 1121 aa22.91■■□□□ 1.26
TOP3B-214ENST00000457270 ZCCHC6Q5VYS8 1495 aaKnown RBP22.86■■□□□ 1.25
TOP3B-214ENST00000457270 CCDC180Q9P1Z9 1646 aa22.76■■□□□ 1.23
TOP3B-214ENST00000457270 TRIM26Q12899 539 aaPredicted RBP22.65■■□□□ 1.22
TOP3B-214ENST00000457270 SCAF1Q9H7N4 1312 aaKnown RBP22.62■■□□□ 1.21
TOP3B-214ENST00000457270 ZEB1P37275 1124 aaPredicted RBP22.58■■□□□ 1.21
TOP3B-214ENST00000457270 LOC105371045A0A1W2PR82 267 aa22.42■■□□□ 1.18
TOP3B-214ENST00000457270 ACIN1Q9UKV3 1341 aaKnown RBP22.04■■□□□ 1.12
TOP3B-214ENST00000457270 NEUROD1Q13562 356 aa21.89■■□□□ 1.1
TOP3B-214ENST00000457270 DCAF8L2P0C7V8 631 aa21.81■■□□□ 1.08
TOP3B-214ENST00000457270 GTF3C3Q9Y5Q9 886 aa21.8■■□□□ 1.08
TOP3B-214ENST00000457270 CENPBP07199 599 aaPredicted RBP21.78■■□□□ 1.08
TOP3B-214ENST00000457270 ABCC9O60706 1549 aa21.75■■□□□ 1.07
TOP3B-214ENST00000457270 TRIM41Q8WV44 630 aa21.66■■□□□ 1.06
TOP3B-214ENST00000457270 TTBK1Q5TCY1 1321 aaPredicted RBP21.63■■□□□ 1.05
TOP3B-214ENST00000457270 DIEXFQ68CQ4 756 aaKnown RBP21.61■■□□□ 1.05
TOP3B-214ENST00000457270 RSF1Q96T23 1441 aaPredicted RBP21.53■■□□□ 1.04
TOP3B-214ENST00000457270 CCER1Q8TC90 406 aaPredicted RBP21.51■■□□□ 1.03
TOP3B-214ENST00000457270 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.5■■□□□ 1.03
TOP3B-214ENST00000457270 RB1CC1Q8TDY2 1594 aa21.47■■□□□ 1.03
TOP3B-214ENST00000457270 FAM9AQ8IZU1 332 aaPredicted RBP21.46■■□□□ 1.03
TOP3B-214ENST00000457270 BCL11AQ9H165 835 aa21.32■■□□□ 1
TOP3B-214ENST00000457270 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
TOP3B-214ENST00000457270 WRNQ14191 1432 aaPredicted RBP eCLIP21.2■□□□□ 0.98
TOP3B-214ENST00000457270 EHMT2Q96KQ7 1210 aa21.2■□□□□ 0.98
TOP3B-214ENST00000457270 SCRIBQ14160 1630 aa21.1■□□□□ 0.97
TOP3B-214ENST00000457270 YTHDC1Q96MU7 727 aaKnown RBP21.06■□□□□ 0.96
TOP3B-214ENST00000457270 MIER1Q8N108 512 aa21.01■□□□□ 0.95
TOP3B-214ENST00000457270 CLSPNQ9HAW4 1339 aa21.01■□□□□ 0.95
TOP3B-214ENST00000457270 ANP32EQ9BTT0 268 aa20.99■□□□□ 0.95
TOP3B-214ENST00000457270 EIF4G1Q04637 1599 aaKnown RBP20.97■□□□□ 0.95
TOP3B-214ENST00000457270 CEP162Q5TB80 1403 aa20.92■□□□□ 0.94
TOP3B-214ENST00000457270 MROH2BQ7Z745 1585 aa20.87■□□□□ 0.93
TOP3B-214ENST00000457270 TNIKQ9UKE5 1360 aa20.85■□□□□ 0.93
TOP3B-214ENST00000457270 PRKCSHP14314 528 aaPredicted RBP20.84■□□□□ 0.93
TOP3B-214ENST00000457270 CECR2Q9BXF3 1484 aa20.82■□□□□ 0.92
TOP3B-214ENST00000457270 WIZO95785 1651 aa20.81■□□□□ 0.92
TOP3B-214ENST00000457270 BAZ1AQ9NRL2 1556 aaPredicted RBP20.8■□□□□ 0.92
TOP3B-214ENST00000457270 SUPT16HQ9Y5B9 1047 aaKnown RBP20.78■□□□□ 0.92
TOP3B-214ENST00000457270 CSRNP3Q8WYN3 585 aa20.77■□□□□ 0.92
TOP3B-214ENST00000457270 EEA1Q15075 1411 aa20.7■□□□□ 0.9
TOP3B-214ENST00000457270 TSHZ2Q9NRE2 1034 aa20.7■□□□□ 0.9
TOP3B-214ENST00000457270 CCDC88BA6NC98 1476 aa20.69■□□□□ 0.9
TOP3B-214ENST00000457270 ABCC8Q09428 1581 aa20.63■□□□□ 0.89
TOP3B-214ENST00000457270 SOGA1O94964 1423 aa20.59■□□□□ 0.89
TOP3B-214ENST00000457270 NACADO15069 1562 aa20.58■□□□□ 0.89
TOP3B-214ENST00000457270 GOLGA3Q08378 1498 aa20.57■□□□□ 0.88
TOP3B-214ENST00000457270 HNRNPUL2Q1KMD3 747 aaKnown RBP20.53■□□□□ 0.88
TOP3B-214ENST00000457270 TOP2AP11388 1531 aaKnown RBP20.51■□□□□ 0.87
TOP3B-214ENST00000457270 UBTFP17480 764 aaKnown RBP20.49■□□□□ 0.87
TOP3B-214ENST00000457270 ERICH6Q7L0X2 663 aa20.44■□□□□ 0.86
TOP3B-214ENST00000457270 RUSC2Q8N2Y8 1516 aa20.44■□□□□ 0.86
TOP3B-214ENST00000457270 SMARCA2P51531 1590 aa20.42■□□□□ 0.86
TOP3B-214ENST00000457270 VPS8Q8N3P4 1428 aa20.4■□□□□ 0.86
TOP3B-214ENST00000457270 KIF21BO75037 1637 aa20.39■□□□□ 0.85
TOP3B-214ENST00000457270 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
TOP3B-214ENST00000457270 DHX57Q6P158 1386 aaKnown RBP20.36■□□□□ 0.85
TOP3B-214ENST00000457270 CLIP1P30622 1438 aa20.35■□□□□ 0.85
TOP3B-214ENST00000457270 BAZ1BQ9UIG0 1483 aaKnown RBP20.28■□□□□ 0.84
TOP3B-214ENST00000457270 SMARCA4P51532 1647 aa20.25■□□□□ 0.83
TOP3B-214ENST00000457270 APLP2Q06481 763 aa20.25■□□□□ 0.83
TOP3B-214ENST00000457270 RBM19Q9Y4C8 960 aaKnown RBP20.2■□□□□ 0.82
TOP3B-214ENST00000457270 CUX2O14529 1486 aa20.16■□□□□ 0.82
TOP3B-214ENST00000457270 FKBP8Q14318 412 aa20.16■□□□□ 0.82
TOP3B-214ENST00000457270 BCANQ96GW7 911 aa20.13■□□□□ 0.81
TOP3B-214ENST00000457270 KCNH8Q96L42 1107 aa20.1■□□□□ 0.81
TOP3B-214ENST00000457270 SYNJ1O43426 1573 aa20.08■□□□□ 0.8
TOP3B-214ENST00000457270 RRBP1Q9P2E9 1410 aaKnown RBP20.07■□□□□ 0.8
TOP3B-214ENST00000457270 RAPGEF2Q9Y4G8 1499 aa20.06■□□□□ 0.8
TOP3B-214ENST00000457270 NEFLP07196 543 aa20.05■□□□□ 0.8
TOP3B-214ENST00000457270 MSH5O43196 834 aa20■□□□□ 0.79
TOP3B-214ENST00000457270 FANCIQ9NVI1 1328 aa19.99■□□□□ 0.79
TOP3B-214ENST00000457270 ARAP1Q96P48 1450 aa19.95■□□□□ 0.78
TOP3B-214ENST00000457270 ANO8Q9HCE9 1232 aaPredicted RBP19.94■□□□□ 0.78
TOP3B-214ENST00000457270 MAPKBP1O60336 1514 aa19.93■□□□□ 0.78
TOP3B-214ENST00000457270 CCER2I3L3R5 266 aa19.93■□□□□ 0.78
TOP3B-214ENST00000457270 MYT1LQ9UL68 1186 aa19.92■□□□□ 0.78
TOP3B-214ENST00000457270 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
TOP3B-214ENST00000457270 KANK4Q5T7N3 995 aaPredicted RBP19.89■□□□□ 0.77
TOP3B-214ENST00000457270 CCNB3Q8WWL7 1395 aa19.89■□□□□ 0.77
TOP3B-214ENST00000457270 PPP1R15AO75807 674 aaPredicted RBP19.88■□□□□ 0.77
TOP3B-214ENST00000457270 PEG3Q9GZU2 1588 aa19.86■□□□□ 0.77
TOP3B-214ENST00000457270 ITGAEP38570 1179 aa19.86■□□□□ 0.77
TOP3B-214ENST00000457270 DDX10Q13206 875 aaKnown RBP19.86■□□□□ 0.77
TOP3B-214ENST00000457270 DEKP35659 375 aaKnown RBP19.83■□□□□ 0.77
TOP3B-214ENST00000457270 WDR97A6NE52 1622 aa19.83■□□□□ 0.77
TOP3B-214ENST00000457270 RAB3GAP2Q9H2M9 1393 aa19.81■□□□□ 0.76
TOP3B-214ENST00000457270 PRXQ9BXM0 1461 aa19.81■□□□□ 0.76
TOP3B-214ENST00000457270 RANGAP1P46060 587 aaPredicted RBP19.78■□□□□ 0.76
TOP3B-214ENST00000457270 TIMELESSQ9UNS1 1208 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms