RNA–Protein interactions for RNA: ENST00000456847.7

CPSF6-203, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 5 BASIC

Gene CPSF6, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-203ENST00000456847 PRG4Q92954 1404 aaPredicted RBP27.65■■■□□ 2.02
CPSF6-203ENST00000456847 JPH4Q96JJ6 628 aa27.63■■■□□ 2.01
CPSF6-203ENST00000456847 KIAA0586Q9BVV6 1533 aa27.6■■■□□ 2.01
CPSF6-203ENST00000456847 TRHP20396 242 aaPredicted RBP27.56■■■□□ 2
CPSF6-203ENST00000456847 RAPGEF2Q9Y4G8 1499 aa27.51■■□□□ 1.99
CPSF6-203ENST00000456847 IQGAP2Q13576 1575 aa27.47■■□□□ 1.99
CPSF6-203ENST00000456847 CTTNBP2Q8WZ74 1663 aa27.37■■□□□ 1.97
CPSF6-203ENST00000456847 CARMIL2Q6F5E8 1435 aa27.36■■□□□ 1.97
CPSF6-203ENST00000456847 PRXQ9BXM0 1461 aa27.3■■□□□ 1.96
CPSF6-203ENST00000456847 ADCY10Q96PN6 1610 aa27.3■■□□□ 1.96
CPSF6-203ENST00000456847 TTBK1Q5TCY1 1321 aaPredicted RBP27.28■■□□□ 1.96
CPSF6-203ENST00000456847 UGGT2Q9NYU1 1516 aa27.27■■□□□ 1.96
CPSF6-203ENST00000456847 PTPRGP23470 1445 aa27.27■■□□□ 1.96
CPSF6-203ENST00000456847 TNIKQ9UKE5 1360 aa27.26■■□□□ 1.95
CPSF6-203ENST00000456847 DISP1Q96F81 1524 aa27.24■■□□□ 1.95
CPSF6-203ENST00000456847 NPM1P06748 294 aaKnown RBP eCLIP27.24■■□□□ 1.95
CPSF6-203ENST00000456847 EEA1Q15075 1411 aa27.22■■□□□ 1.95
CPSF6-203ENST00000456847 KIAA0556O60303 1618 aa27.22■■□□□ 1.95
CPSF6-203ENST00000456847 CSRNP3Q8WYN3 585 aa27.21■■□□□ 1.95
CPSF6-203ENST00000456847 KIF13AQ9H1H9 1805 aa27.16■■□□□ 1.94
CPSF6-203ENST00000456847 MAPKBP1O60336 1514 aa27.16■■□□□ 1.94
CPSF6-203ENST00000456847 FAM9AQ8IZU1 332 aaPredicted RBP27.12■■□□□ 1.93
CPSF6-203ENST00000456847 GOLGA3Q08378 1498 aa27.12■■□□□ 1.93
CPSF6-203ENST00000456847 CHIC1Q5VXU3 224 aa27.11■■□□□ 1.93
CPSF6-203ENST00000456847 UACAQ9BZF9 1416 aa27.08■■□□□ 1.93
CPSF6-203ENST00000456847 ABCC2Q92887 1545 aa27.07■■□□□ 1.92
CPSF6-203ENST00000456847 UHRF1BP1LA0JNW5 1464 aa27.06■■□□□ 1.92
CPSF6-203ENST00000456847 ABCC10Q5T3U5 1492 aa27.05■■□□□ 1.92
CPSF6-203ENST00000456847 DIP2BQ9P265 1576 aa27.05■■□□□ 1.92
CPSF6-203ENST00000456847 KIF21BO75037 1637 aa27.01■■□□□ 1.91
CPSF6-203ENST00000456847 FAM69CQ0P6D2 419 aa27■■□□□ 1.91
CPSF6-203ENST00000456847 ZCCHC11Q5TAX3 1644 aaKnown RBP26.96■■□□□ 1.91
CPSF6-203ENST00000456847 PLB1Q6P1J6 1458 aa26.94■■□□□ 1.9
CPSF6-203ENST00000456847 KDM5BQ9UGL1 1544 aa26.93■■□□□ 1.9
CPSF6-203ENST00000456847 ASXL2Q76L83 1435 aa26.93■■□□□ 1.9
CPSF6-203ENST00000456847 SAMD9Q5K651 1589 aa26.93■■□□□ 1.9
CPSF6-203ENST00000456847 TSPOAP1O95153 1857 aa26.91■■□□□ 1.9
CPSF6-203ENST00000456847 ABCA8O94911 1581 aa26.91■■□□□ 1.9
CPSF6-203ENST00000456847 P3H3Q8IVL6 736 aa26.9■■□□□ 1.9
CPSF6-203ENST00000456847 RANGAP1P46060 587 aaPredicted RBP26.86■■□□□ 1.89
CPSF6-203ENST00000456847 EHMT2Q96KQ7 1210 aa26.83■■□□□ 1.89
CPSF6-203ENST00000456847 GLI2P10070 1586 aa26.81■■□□□ 1.88
CPSF6-203ENST00000456847 EPRSP07814 1512 aaKnown RBP26.77■■□□□ 1.88
CPSF6-203ENST00000456847 WDR7Q9Y4E6 1490 aa26.77■■□□□ 1.88
CPSF6-203ENST00000456847 UBTFP17480 764 aaKnown RBP26.77■■□□□ 1.88
CPSF6-203ENST00000456847 EFCAB5A4FU69 1503 aa26.76■■□□□ 1.87
CPSF6-203ENST00000456847 RAPGEF6Q8TEU7 1601 aa26.76■■□□□ 1.87
CPSF6-203ENST00000456847 FHOD3Q2V2M9 1422 aa26.75■■□□□ 1.87
CPSF6-203ENST00000456847 KDM6BO15054 1643 aa26.73■■□□□ 1.87
CPSF6-203ENST00000456847 MAP3K4Q9Y6R4 1608 aa26.71■■□□□ 1.87
CPSF6-203ENST00000456847 PPRC1Q5VV67 1664 aaKnown RBP26.71■■□□□ 1.87
CPSF6-203ENST00000456847 ARID3CA6NKF2 412 aa26.71■■□□□ 1.87
CPSF6-203ENST00000456847 ATP10BO94823 1461 aa26.65■■□□□ 1.86
CPSF6-203ENST00000456847 CFAP43Q8NDM7 1665 aa26.62■■□□□ 1.85
CPSF6-203ENST00000456847 KCNH8Q96L42 1107 aa26.62■■□□□ 1.85
CPSF6-203ENST00000456847 TEX14Q8IWB6 1497 aa26.61■■□□□ 1.85
CPSF6-203ENST00000456847 NUP153P49790 1475 aaKnown RBP26.59■■□□□ 1.85
CPSF6-203ENST00000456847 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.59■■□□□ 1.85
CPSF6-203ENST00000456847 HNRNPUL2Q1KMD3 747 aaKnown RBP26.59■■□□□ 1.85
CPSF6-203ENST00000456847 ARHGAP35Q9NRY4 1499 aa26.54■■□□□ 1.84
CPSF6-203ENST00000456847 CD109Q6YHK3 1445 aa26.53■■□□□ 1.84
CPSF6-203ENST00000456847 FMN1Q68DA7 1419 aa26.49■■□□□ 1.83
CPSF6-203ENST00000456847 MAGI3Q5TCQ9 1506 aa26.49■■□□□ 1.83
CPSF6-203ENST00000456847 ABCA9Q8IUA7 1624 aa26.47■■□□□ 1.83
CPSF6-203ENST00000456847 HECW1Q76N89 1606 aa26.47■■□□□ 1.83
CPSF6-203ENST00000456847 CDK13Q14004 1512 aaKnown RBP26.43■■□□□ 1.82
CPSF6-203ENST00000456847 ATP1B4Q9UN42 357 aaPredicted RBP26.42■■□□□ 1.82
CPSF6-203ENST00000456847 COL17A1Q9UMD9 1497 aaPredicted RBP26.41■■□□□ 1.82
CPSF6-203ENST00000456847 PLEKHD1A6NEE1 506 aa26.4■■□□□ 1.82
CPSF6-203ENST00000456847 AEBP2Q6ZN18 517 aaPredicted RBP26.39■■□□□ 1.82
CPSF6-203ENST00000456847 CLIP1P30622 1438 aa26.31■■□□□ 1.8
CPSF6-203ENST00000456847 PCF11O94913 1555 aaKnown RBP26.31■■□□□ 1.8
CPSF6-203ENST00000456847 LRRIQ1Q96JM4 1722 aa26.3■■□□□ 1.8
CPSF6-203ENST00000456847 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.29■■□□□ 1.86e-7■■□□□ 12.9
CPSF6-203ENST00000456847 TTC37Q6PGP7 1564 aa26.28■■□□□ 1.8
CPSF6-203ENST00000456847 NEO1Q92859 1461 aa26.26■■□□□ 1.79
CPSF6-203ENST00000456847 ARAP3Q8WWN8 1544 aa26.25■■□□□ 1.79
CPSF6-203ENST00000456847 PHLDB1Q86UU1 1377 aa26.24■■□□□ 1.79
CPSF6-203ENST00000456847 CDK11AQ9UQ88 783 aaPredicted RBP26.24■■□□□ 1.79
CPSF6-203ENST00000456847 CASKIN1Q8WXD9 1431 aa26.24■■□□□ 1.79
CPSF6-203ENST00000456847 CFAP74Q9C0B2 1584 aa26.24■■□□□ 1.79
CPSF6-203ENST00000456847 KIF14Q15058 1648 aa26.21■■□□□ 1.79
CPSF6-203ENST00000456847 CCDC18Q5T9S5 1454 aa26.2■■□□□ 1.79
CPSF6-203ENST00000456847 FYCO1Q9BQS8 1478 aa26.19■■□□□ 1.78
CPSF6-203ENST00000456847 MYO5CQ9NQX4 1742 aa26.18■■□□□ 1.78
CPSF6-203ENST00000456847 FANCAO15360 1455 aa26.17■■□□□ 1.78
CPSF6-203ENST00000456847 TROQ12816 1431 aaPredicted RBP26.17■■□□□ 1.78
CPSF6-203ENST00000456847 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
CPSF6-203ENST00000456847 KDM4FA0A1W2PPD8 638 aa26.12■■□□□ 1.77
CPSF6-203ENST00000456847 AKNAQ7Z591 1439 aa26.12■■□□□ 1.77
CPSF6-203ENST00000456847 ADGRL1O94910 1474 aa26.12■■□□□ 1.77
CPSF6-203ENST00000456847 FRMPD1Q5SYB0 1578 aa26.12■■□□□ 1.77
CPSF6-203ENST00000456847 RAPGEF3O95398 923 aa26.1■■□□□ 1.77
CPSF6-203ENST00000456847 PLCH2O75038 1416 aa26.09■■□□□ 1.77
CPSF6-203ENST00000456847 DENND4BO75064 1496 aaPredicted RBP26.08■■□□□ 1.77
CPSF6-203ENST00000456847 RICTORQ6R327 1708 aa26.08■■□□□ 1.77
CPSF6-203ENST00000456847 ARHGAP5Q13017 1502 aa26.03■■□□□ 1.76
CPSF6-203ENST00000456847 LOC105371045A0A1W2PR82 267 aa26.01■■□□□ 1.75
CPSF6-203ENST00000456847 EFCAB2Q5VUJ9 269 aa26■■□□□ 1.75
CPSF6-203ENST00000456847 PREX2Q70Z35 1606 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms