RNA–Protein interactions for RNA: ENST00000456133.5

EPCAM-204, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5

Gene EPCAM, Length 1,501 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-204ENST00000456133 RUSC2Q8N2Y8 1516 aa24■■□□□ 1.43
EPCAM-204ENST00000456133 FAM69CQ0P6D2 419 aa23.96■■□□□ 1.43
EPCAM-204ENST00000456133 ABCC10Q5T3U5 1492 aa23.96■■□□□ 1.43
EPCAM-204ENST00000456133 NPM1P06748 294 aaKnown RBP eCLIP23.93■■□□□ 1.42
EPCAM-204ENST00000456133 ADCY10Q96PN6 1610 aa23.92■■□□□ 1.42
EPCAM-204ENST00000456133 MAPKBP1O60336 1514 aa23.92■■□□□ 1.42
EPCAM-204ENST00000456133 DIP2BQ9P265 1576 aa23.92■■□□□ 1.42
EPCAM-204ENST00000456133 TSPOAP1O95153 1857 aa23.88■■□□□ 1.41
EPCAM-204ENST00000456133 KDM6BO15054 1643 aa23.83■■□□□ 1.41
EPCAM-204ENST00000456133 KIAA0586Q9BVV6 1533 aa23.79■■□□□ 1.4
EPCAM-204ENST00000456133 CUL7Q14999 1698 aa23.76■■□□□ 1.39
EPCAM-204ENST00000456133 KDM4FA0A1W2PPD8 638 aa23.74■■□□□ 1.39
EPCAM-204ENST00000456133 IGF1RP08069 1367 aa23.73■■□□□ 1.39
EPCAM-204ENST00000456133 KIF27Q86VH2 1401 aa23.68■■□□□ 1.38
EPCAM-204ENST00000456133 PTPRGP23470 1445 aa23.66■■□□□ 1.38
EPCAM-204ENST00000456133 TTBK1Q5TCY1 1321 aaPredicted RBP23.66■■□□□ 1.38
EPCAM-204ENST00000456133 PPRC1Q5VV67 1664 aaKnown RBP23.61■■□□□ 1.37
EPCAM-204ENST00000456133 ABCC2Q92887 1545 aa23.59■■□□□ 1.37
EPCAM-204ENST00000456133 TNIKQ9UKE5 1360 aa23.58■■□□□ 1.37
EPCAM-204ENST00000456133 CARMIL1Q5VZK9 1371 aa23.58■■□□□ 1.36
EPCAM-204ENST00000456133 CARMIL2Q6F5E8 1435 aa23.57■■□□□ 1.36
EPCAM-204ENST00000456133 ASXL2Q76L83 1435 aa23.56■■□□□ 1.36
EPCAM-204ENST00000456133 GLI2P10070 1586 aa23.55■■□□□ 1.36
EPCAM-204ENST00000456133 IQGAP2Q13576 1575 aa23.54■■□□□ 1.36
EPCAM-204ENST00000456133 PLB1Q6P1J6 1458 aa23.54■■□□□ 1.36
EPCAM-204ENST00000456133 UHRF1BP1LA0JNW5 1464 aa23.5■■□□□ 1.35
EPCAM-204ENST00000456133 UACAQ9BZF9 1416 aa23.47■■□□□ 1.35
EPCAM-204ENST00000456133 ADGRL1O94910 1474 aa23.47■■□□□ 1.35
EPCAM-204ENST00000456133 DISP1Q96F81 1524 aa23.45■■□□□ 1.34
EPCAM-204ENST00000456133 MAP3K4Q9Y6R4 1608 aa23.45■■□□□ 1.34
EPCAM-204ENST00000456133 ILDR1Q86SU0 546 aaPredicted RBP23.44■■□□□ 1.34
EPCAM-204ENST00000456133 COL17A1Q9UMD9 1497 aaPredicted RBP23.42■■□□□ 1.34
EPCAM-204ENST00000456133 EPRSP07814 1512 aaKnown RBP23.42■■□□□ 1.34
EPCAM-204ENST00000456133 ZCCHC11Q5TAX3 1644 aaKnown RBP23.41■■□□□ 1.34
EPCAM-204ENST00000456133 KDM5BQ9UGL1 1544 aa23.4■■□□□ 1.34
EPCAM-204ENST00000456133 UGGT2Q9NYU1 1516 aa23.36■■□□□ 1.33
EPCAM-204ENST00000456133 TEX14Q8IWB6 1497 aa23.35■■□□□ 1.33
EPCAM-204ENST00000456133 KIAA0556O60303 1618 aa23.34■■□□□ 1.33
EPCAM-204ENST00000456133 RAPGEF2Q9Y4G8 1499 aa23.31■■□□□ 1.32
EPCAM-204ENST00000456133 HECW2Q9P2P5 1572 aa23.3■■□□□ 1.32
EPCAM-204ENST00000456133 WDR7Q9Y4E6 1490 aa23.26■■□□□ 1.31
EPCAM-204ENST00000456133 CTTNBP2Q8WZ74 1663 aa23.24■■□□□ 1.31
EPCAM-204ENST00000456133 CFAP43Q8NDM7 1665 aa23.21■■□□□ 1.31
EPCAM-204ENST00000456133 CD109Q6YHK3 1445 aa23.17■■□□□ 1.3
EPCAM-204ENST00000456133 MAGI3Q5TCQ9 1506 aa23.16■■□□□ 1.3
EPCAM-204ENST00000456133 ABCA8O94911 1581 aa23.15■■□□□ 1.3
EPCAM-204ENST00000456133 KCNH8Q96L42 1107 aa23.15■■□□□ 1.3
EPCAM-204ENST00000456133 GOLGA3Q08378 1498 aa23.12■■□□□ 1.29
EPCAM-204ENST00000456133 KIF21BO75037 1637 aa23.12■■□□□ 1.29
EPCAM-204ENST00000456133 ARAP3Q8WWN8 1544 aa23■■□□□ 1.27
EPCAM-204ENST00000456133 ARID3CA6NKF2 412 aa22.98■■□□□ 1.27
EPCAM-204ENST00000456133 PRXQ9BXM0 1461 aa22.97■■□□□ 1.27
EPCAM-204ENST00000456133 ATP10BO94823 1461 aa22.95■■□□□ 1.26
EPCAM-204ENST00000456133 ABCA9Q8IUA7 1624 aa22.93■■□□□ 1.26
EPCAM-204ENST00000456133 ADAMTSL3P82987 1691 aa22.93■■□□□ 1.26
EPCAM-204ENST00000456133 P3H3Q8IVL6 736 aa22.92■■□□□ 1.26
EPCAM-204ENST00000456133 FAM9AQ8IZU1 332 aaPredicted RBP22.89■■□□□ 1.26
EPCAM-204ENST00000456133 PTPRMP28827 1452 aa22.88■■□□□ 1.25
EPCAM-204ENST00000456133 PHLDB1Q86UU1 1377 aa22.87■■□□□ 1.25
EPCAM-204ENST00000456133 FBXO41Q8TF61 875 aa22.87■■□□□ 1.25
EPCAM-204ENST00000456133 RAPGEF3O95398 923 aa22.86■■□□□ 1.25
EPCAM-204ENST00000456133 BCORL1Q5H9F3 1711 aa22.85■■□□□ 1.25
EPCAM-204ENST00000456133 RAPGEF6Q8TEU7 1601 aa22.84■■□□□ 1.25
EPCAM-204ENST00000456133 SAMD9Q5K651 1589 aa22.83■■□□□ 1.25
EPCAM-204ENST00000456133 NEO1Q92859 1461 aa22.82■■□□□ 1.24
EPCAM-204ENST00000456133 FRMPD1Q5SYB0 1578 aa22.82■■□□□ 1.24
EPCAM-204ENST00000456133 MADDQ8WXG6 1647 aa22.81■■□□□ 1.24
EPCAM-204ENST00000456133 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.77■■□□□ 1.24
EPCAM-204ENST00000456133 HNRNPUL2Q1KMD3 747 aaKnown RBP22.77■■□□□ 1.24
EPCAM-204ENST00000456133 ARID4BQ4LE39 1312 aaPredicted RBP22.77■■□□□ 1.24
EPCAM-204ENST00000456133 PCF11O94913 1555 aaKnown RBP22.75■■□□□ 1.23
EPCAM-204ENST00000456133 RIMS1Q86UR5 1692 aaKnown RBP22.75■■□□□ 1.23
EPCAM-204ENST00000456133 RICTORQ6R327 1708 aa22.72■■□□□ 1.23
EPCAM-204ENST00000456133 NUP153P49790 1475 aaKnown RBP22.72■■□□□ 1.23
EPCAM-204ENST00000456133 LMTK3Q96Q04 1460 aa22.71■■□□□ 1.23
EPCAM-204ENST00000456133 ARHGEF40Q8TER5 1519 aa22.7■■□□□ 1.23
EPCAM-204ENST00000456133 CSRNP3Q8WYN3 585 aa22.68■■□□□ 1.22
EPCAM-204ENST00000456133 DENND4BO75064 1496 aaPredicted RBP22.67■■□□□ 1.22
EPCAM-204ENST00000456133 RANGAP1P46060 587 aaPredicted RBP22.66■■□□□ 1.22
EPCAM-204ENST00000456133 CFAP74Q9C0B2 1584 aa22.65■■□□□ 1.22
EPCAM-204ENST00000456133 FHOD3Q2V2M9 1422 aa22.64■■□□□ 1.22
EPCAM-204ENST00000456133 AKNAQ7Z591 1439 aa22.64■■□□□ 1.22
EPCAM-204ENST00000456133 SIGLEC1Q9BZZ2 1709 aa22.62■■□□□ 1.21
EPCAM-204ENST00000456133 PLEKHD1A6NEE1 506 aa22.62■■□□□ 1.21
EPCAM-204ENST00000456133 FANCAO15360 1455 aa22.61■■□□□ 1.21
EPCAM-204ENST00000456133 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.61■■□□□ 1.215e-7■□□□□ 8.9
EPCAM-204ENST00000456133 PLPPR3Q6T4P5 718 aa22.6■■□□□ 1.21
EPCAM-204ENST00000456133 TTC37Q6PGP7 1564 aa22.59■■□□□ 1.21
EPCAM-204ENST00000456133 HSPA2P54652 639 aa22.59■■□□□ 1.21
EPCAM-204ENST00000456133 ZMYM4Q5VZL5 1548 aa22.58■■□□□ 1.21
EPCAM-204ENST00000456133 ZFYVE16Q7Z3T8 1539 aa22.56■■□□□ 1.2
EPCAM-204ENST00000456133 POGZQ7Z3K3 1410 aa22.56■■□□□ 1.2
EPCAM-204ENST00000456133 FER1L4A9Z1Z3 1794 aa22.56■■□□□ 1.2
EPCAM-204ENST00000456133 YEATS2Q9ULM3 1422 aa22.55■■□□□ 1.2
EPCAM-204ENST00000456133 EFCAB5A4FU69 1503 aa22.55■■□□□ 1.2
EPCAM-204ENST00000456133 HECW1Q76N89 1606 aa22.53■■□□□ 1.2
EPCAM-204ENST00000456133 MLECQ14165 292 aa22.51■■□□□ 1.19
EPCAM-204ENST00000456133 MAGI2Q86UL8 1455 aa22.5■■□□□ 1.19
EPCAM-204ENST00000456133 CDK13Q14004 1512 aaKnown RBP22.49■■□□□ 1.19
EPCAM-204ENST00000456133 EEA1Q15075 1411 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms