RNA–Protein interactions for RNA: ENST00000456069.1

GRAMD4-206, Transcript of GRAM domain containing 4, humanhuman

TSL 3

Gene GRAMD4, Length 669 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-206ENST00000456069 ARHGEF11O15085 1522 aa17.08■□□□□ 0.32
GRAMD4-206ENST00000456069 IQGAP2Q13576 1575 aa17.06■□□□□ 0.32
GRAMD4-206ENST00000456069 CTTNBP2Q8WZ74 1663 aa17.06■□□□□ 0.32
GRAMD4-206ENST00000456069 RIMBP3CA6NJZ7 1639 aa17.04■□□□□ 0.32
GRAMD4-206ENST00000456069 RIMBP3BA6NNM3 1639 aa17.04■□□□□ 0.32
GRAMD4-206ENST00000456069 RIMBP3Q9UFD9 1639 aa17.04■□□□□ 0.32
GRAMD4-206ENST00000456069 FAM9AQ8IZU1 332 aaPredicted RBP17.03■□□□□ 0.32
GRAMD4-206ENST00000456069 JPH4Q96JJ6 628 aa17.03■□□□□ 0.32
GRAMD4-206ENST00000456069 UGGT2Q9NYU1 1516 aa17.02■□□□□ 0.32
GRAMD4-206ENST00000456069 GOLGA3Q08378 1498 aa17.01■□□□□ 0.31
GRAMD4-206ENST00000456069 PRG4Q92954 1404 aaPredicted RBP16.99■□□□□ 0.31
GRAMD4-206ENST00000456069 ERCC6L2Q5T890 1561 aa16.97■□□□□ 0.31
GRAMD4-206ENST00000456069 ARAP1Q96P48 1450 aa16.96■□□□□ 0.31
GRAMD4-206ENST00000456069 DISP1Q96F81 1524 aa16.95■□□□□ 0.3
GRAMD4-206ENST00000456069 CARMIL2Q6F5E8 1435 aa16.93■□□□□ 0.3
GRAMD4-206ENST00000456069 KIAA0556O60303 1618 aa16.91■□□□□ 0.3
GRAMD4-206ENST00000456069 SAMD9Q5K651 1589 aa16.89■□□□□ 0.3
GRAMD4-206ENST00000456069 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
GRAMD4-206ENST00000456069 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
GRAMD4-206ENST00000456069 UBTFP17480 764 aaKnown RBP16.82■□□□□ 0.28
GRAMD4-206ENST00000456069 PTPRGP23470 1445 aa16.81■□□□□ 0.28
GRAMD4-206ENST00000456069 CYB5RLQ6IPT4 315 aa16.8■□□□□ 0.28
GRAMD4-206ENST00000456069 UHRF1BP1LA0JNW5 1464 aa16.78■□□□□ 0.28
GRAMD4-206ENST00000456069 ARHGAP35Q9NRY4 1499 aa16.76■□□□□ 0.27
GRAMD4-206ENST00000456069 UACAQ9BZF9 1416 aa16.74■□□□□ 0.27
GRAMD4-206ENST00000456069 ADCY10Q96PN6 1610 aa16.74■□□□□ 0.27
GRAMD4-206ENST00000456069 ABCA8O94911 1581 aa16.73■□□□□ 0.27
GRAMD4-206ENST00000456069 ABCC2Q92887 1545 aa16.73■□□□□ 0.27
GRAMD4-206ENST00000456069 EHMT2Q96KQ7 1210 aa16.7■□□□□ 0.26
GRAMD4-206ENST00000456069 CLIP1P30622 1438 aa16.7■□□□□ 0.26
GRAMD4-206ENST00000456069 FHOD3Q2V2M9 1422 aa16.7■□□□□ 0.26
GRAMD4-206ENST00000456069 KDM5BQ9UGL1 1544 aa16.68■□□□□ 0.26
GRAMD4-206ENST00000456069 PLB1Q6P1J6 1458 aa16.67■□□□□ 0.26
GRAMD4-206ENST00000456069 LOC105371045A0A1W2PR82 267 aa16.67■□□□□ 0.26
GRAMD4-206ENST00000456069 CEP162Q5TB80 1403 aa16.67■□□□□ 0.26
GRAMD4-206ENST00000456069 FMN1Q68DA7 1419 aa16.67■□□□□ 0.26
GRAMD4-206ENST00000456069 MAPKBP1O60336 1514 aa16.65■□□□□ 0.26
GRAMD4-206ENST00000456069 RAPGEF6Q8TEU7 1601 aa16.64■□□□□ 0.25
GRAMD4-206ENST00000456069 P3H3Q8IVL6 736 aa16.64■□□□□ 0.25
GRAMD4-206ENST00000456069 RANGAP1P46060 587 aaPredicted RBP16.6■□□□□ 0.25
GRAMD4-206ENST00000456069 NUP153P49790 1475 aaKnown RBP16.6■□□□□ 0.25
GRAMD4-206ENST00000456069 ZCCHC11Q5TAX3 1644 aaKnown RBP16.58■□□□□ 0.24
GRAMD4-206ENST00000456069 TTBK1Q5TCY1 1321 aaPredicted RBP16.57■□□□□ 0.24
GRAMD4-206ENST00000456069 ATP10BO94823 1461 aa16.56■□□□□ 0.24
GRAMD4-206ENST00000456069 CASKIN1Q8WXD9 1431 aa16.56■□□□□ 0.24
GRAMD4-206ENST00000456069 NPM1P06748 294 aaKnown RBP eCLIP16.56■□□□□ 0.24
GRAMD4-206ENST00000456069 HECW1Q76N89 1606 aa16.56■□□□□ 0.24
GRAMD4-206ENST00000456069 FYCO1Q9BQS8 1478 aa16.54■□□□□ 0.24
GRAMD4-206ENST00000456069 ASXL2Q76L83 1435 aa16.53■□□□□ 0.24
GRAMD4-206ENST00000456069 PCF11O94913 1555 aaKnown RBP16.52■□□□□ 0.24
GRAMD4-206ENST00000456069 EPRSP07814 1512 aaKnown RBP16.51■□□□□ 0.23
GRAMD4-206ENST00000456069 ABCC10Q5T3U5 1492 aa16.51■□□□□ 0.23
GRAMD4-206ENST00000456069 WDR7Q9Y4E6 1490 aa16.49■□□□□ 0.23
GRAMD4-206ENST00000456069 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
GRAMD4-206ENST00000456069 GLI2P10070 1586 aa16.48■□□□□ 0.23
GRAMD4-206ENST00000456069 DIP2BQ9P265 1576 aa16.48■□□□□ 0.23
GRAMD4-206ENST00000456069 VPS8Q8N3P4 1428 aa16.48■□□□□ 0.23
GRAMD4-206ENST00000456069 LRRIQ1Q96JM4 1722 aa16.47■□□□□ 0.23
GRAMD4-206ENST00000456069 KIF13AQ9H1H9 1805 aa16.45■□□□□ 0.22
GRAMD4-206ENST00000456069 CDK13Q14004 1512 aaKnown RBP16.45■□□□□ 0.22
GRAMD4-206ENST00000456069 MAP3K1Q13233 1512 aa16.4■□□□□ 0.22
GRAMD4-206ENST00000456069 CDK11AQ9UQ88 783 aaPredicted RBP16.38■□□□□ 0.21
GRAMD4-206ENST00000456069 ABCA9Q8IUA7 1624 aa16.37■□□□□ 0.21
GRAMD4-206ENST00000456069 MAP3K4Q9Y6R4 1608 aa16.37■□□□□ 0.21
GRAMD4-206ENST00000456069 TROQ12816 1431 aaPredicted RBP16.37■□□□□ 0.21
GRAMD4-206ENST00000456069 PLEKHD1A6NEE1 506 aa16.37■□□□□ 0.21
GRAMD4-206ENST00000456069 CFAP43Q8NDM7 1665 aa16.37■□□□□ 0.21
GRAMD4-206ENST00000456069 FAM69CQ0P6D2 419 aa16.36■□□□□ 0.21
GRAMD4-206ENST00000456069 ARID3CA6NKF2 412 aa16.35■□□□□ 0.21
GRAMD4-206ENST00000456069 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.34■□□□□ 0.21
GRAMD4-206ENST00000456069 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
GRAMD4-206ENST00000456069 HNRNPUL2Q1KMD3 747 aaKnown RBP16.34■□□□□ 0.21
GRAMD4-206ENST00000456069 MAGI3Q5TCQ9 1506 aa16.34■□□□□ 0.21
GRAMD4-206ENST00000456069 TIAM1Q13009 1591 aa16.34■□□□□ 0.21
GRAMD4-206ENST00000456069 ATP1B4Q9UN42 357 aaPredicted RBP16.33■□□□□ 0.2
GRAMD4-206ENST00000456069 PPRC1Q5VV67 1664 aaKnown RBP16.31■□□□□ 0.2
GRAMD4-206ENST00000456069 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.31■□□□□ 0.2
GRAMD4-206ENST00000456069 KIF14Q15058 1648 aa16.3■□□□□ 0.2
GRAMD4-206ENST00000456069 EHBP1L1Q8N3D4 1523 aa16.3■□□□□ 0.2
GRAMD4-206ENST00000456069 ARAP3Q8WWN8 1544 aa16.29■□□□□ 0.2
GRAMD4-206ENST00000456069 CD109Q6YHK3 1445 aa16.28■□□□□ 0.2
GRAMD4-206ENST00000456069 TTC37Q6PGP7 1564 aa16.28■□□□□ 0.2
GRAMD4-206ENST00000456069 KCNH8Q96L42 1107 aa16.27■□□□□ 0.2
GRAMD4-206ENST00000456069 TEX14Q8IWB6 1497 aa16.27■□□□□ 0.19
GRAMD4-206ENST00000456069 LRRC9Q6ZRR7 1453 aa16.26■□□□□ 0.19
GRAMD4-206ENST00000456069 MTUS2Q5JR59 1369 aa16.26■□□□□ 0.19
GRAMD4-206ENST00000456069 PHLDB1Q86UU1 1377 aa16.24■□□□□ 0.19
GRAMD4-206ENST00000456069 PLCH2O75038 1416 aa16.23■□□□□ 0.19
GRAMD4-206ENST00000456069 NEO1Q92859 1461 aa16.22■□□□□ 0.19
GRAMD4-206ENST00000456069 TSPOAP1O95153 1857 aa16.21■□□□□ 0.19
GRAMD4-206ENST00000456069 MYO5CQ9NQX4 1742 aa16.21■□□□□ 0.19
GRAMD4-206ENST00000456069 PREX2Q70Z35 1606 aa16.2■□□□□ 0.18
GRAMD4-206ENST00000456069 SUPT6HQ7KZ85 1726 aaKnown RBP16.2■□□□□ 0.18
GRAMD4-206ENST00000456069 CFAP74Q9C0B2 1584 aa16.19■□□□□ 0.18
GRAMD4-206ENST00000456069 CDC42BPAQ5VT25 1732 aa16.18■□□□□ 0.18
GRAMD4-206ENST00000456069 NCOA2Q15596 1464 aa16.17■□□□□ 0.18
GRAMD4-206ENST00000456069 APLP2Q06481 763 aa16.17■□□□□ 0.18
GRAMD4-206ENST00000456069 GPATCH8Q9UKJ3 1502 aaKnown RBP16.17■□□□□ 0.18
GRAMD4-206ENST00000456069 CDC42BPBQ9Y5S2 1711 aa16.16■□□□□ 0.18
GRAMD4-206ENST00000456069 FANCAO15360 1455 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms