RNA–Protein interactions for RNA: ENST00000456069.1

GRAMD4-206, Transcript of GRAM domain containing 4, humanhuman

TSL 3

Gene GRAMD4, Length 669 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD4-206ENST00000456069 NISCHQ9Y2I1 1504 aa24.86■■□□□ 1.57
GRAMD4-206ENST00000456069 CCDC180Q9P1Z9 1646 aa22.07■■□□□ 1.12
GRAMD4-206ENST00000456069 ABCC9O60706 1549 aa21.23■□□□□ 0.99
GRAMD4-206ENST00000456069 ZCCHC6Q5VYS8 1495 aaKnown RBP20.79■□□□□ 0.92
GRAMD4-206ENST00000456069 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
GRAMD4-206ENST00000456069 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
GRAMD4-206ENST00000456069 NACADO15069 1562 aa20.68■□□□□ 0.9
GRAMD4-206ENST00000456069 RB1CC1Q8TDY2 1594 aa20.61■□□□□ 0.89
GRAMD4-206ENST00000456069 DCAF8L2P0C7V8 631 aa20.42■□□□□ 0.86
GRAMD4-206ENST00000456069 UNC13AQ9UPW8 1703 aa20.13■□□□□ 0.81
GRAMD4-206ENST00000456069 BICRAQ9NZM4 1560 aa20■□□□□ 0.79
GRAMD4-206ENST00000456069 SCRIBQ14160 1630 aa20■□□□□ 0.79
GRAMD4-206ENST00000456069 SHROOM4Q9ULL8 1493 aa19.93■□□□□ 0.78
GRAMD4-206ENST00000456069 PABPN1Q86U42 306 aaKnown RBP eCLIP19.81■□□□□ 0.76
GRAMD4-206ENST00000456069 EIF4G1Q04637 1599 aaKnown RBP19.43■□□□□ 0.7
GRAMD4-206ENST00000456069 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
GRAMD4-206ENST00000456069 CECR2Q9BXF3 1484 aa19.29■□□□□ 0.68
GRAMD4-206ENST00000456069 CC2D2AQ9P2K1 1620 aa19.27■□□□□ 0.68
GRAMD4-206ENST00000456069 BAZ1AQ9NRL2 1556 aaPredicted RBP19.27■□□□□ 0.67
GRAMD4-206ENST00000456069 SMARCA4P51532 1647 aa19.24■□□□□ 0.67
GRAMD4-206ENST00000456069 PEG3Q9GZU2 1588 aa19.15■□□□□ 0.66
GRAMD4-206ENST00000456069 MROH2BQ7Z745 1585 aa19.13■□□□□ 0.65
GRAMD4-206ENST00000456069 SMARCA2P51531 1590 aa19.1■□□□□ 0.65
GRAMD4-206ENST00000456069 NCAPD3P42695 1498 aa19.09■□□□□ 0.65
GRAMD4-206ENST00000456069 ATAD2BQ9ULI0 1458 aa19.09■□□□□ 0.65
GRAMD4-206ENST00000456069 HMGXB3Q12766 1538 aa19.03■□□□□ 0.64
GRAMD4-206ENST00000456069 RSF1Q96T23 1441 aaPredicted RBP19■□□□□ 0.63
GRAMD4-206ENST00000456069 BAZ1BQ9UIG0 1483 aaKnown RBP18.9■□□□□ 0.62
GRAMD4-206ENST00000456069 WIZO95785 1651 aa18.89■□□□□ 0.61
GRAMD4-206ENST00000456069 TOP2AP11388 1531 aaKnown RBP18.79■□□□□ 0.6
GRAMD4-206ENST00000456069 LAMC3Q9Y6N6 1575 aa18.54■□□□□ 0.56
GRAMD4-206ENST00000456069 CCDC88BA6NC98 1476 aa18.52■□□□□ 0.55
GRAMD4-206ENST00000456069 CADPSQ9ULU8 1353 aa18.49■□□□□ 0.55
GRAMD4-206ENST00000456069 SUPT5HO00267 1087 aaKnown RBP18.48■□□□□ 0.55
GRAMD4-206ENST00000456069 CFTRP13569 1480 aa18.46■□□□□ 0.55
GRAMD4-206ENST00000456069 NESP48681 1621 aa18.44■□□□□ 0.54
GRAMD4-206ENST00000456069 PDS5BQ9NTI5 1447 aa18.36■□□□□ 0.53
GRAMD4-206ENST00000456069 PRDM2Q13029 1718 aa18.34■□□□□ 0.53
GRAMD4-206ENST00000456069 ERCC6Q03468 1493 aa18.28■□□□□ 0.52
GRAMD4-206ENST00000456069 KIF21AQ7Z4S6 1674 aa18.26■□□□□ 0.51
GRAMD4-206ENST00000456069 FANCD2Q9BXW9 1451 aa18.26■□□□□ 0.51
GRAMD4-206ENST00000456069 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
GRAMD4-206ENST00000456069 CEP164Q9UPV0 1460 aa18.21■□□□□ 0.51
GRAMD4-206ENST00000456069 MRC2Q9UBG0 1479 aa18.16■□□□□ 0.5
GRAMD4-206ENST00000456069 CUX2O14529 1486 aa18.14■□□□□ 0.49
GRAMD4-206ENST00000456069 WDR62O43379 1518 aa18.13■□□□□ 0.49
GRAMD4-206ENST00000456069 URB2Q14146 1524 aaKnown RBP18.08■□□□□ 0.48
GRAMD4-206ENST00000456069 ABCC8Q09428 1581 aa18.07■□□□□ 0.48
GRAMD4-206ENST00000456069 DNMBPQ6XZF7 1577 aa18.02■□□□□ 0.48
GRAMD4-206ENST00000456069 TOPBP1Q92547 1522 aa18.01■□□□□ 0.47
GRAMD4-206ENST00000456069 CUX1P39880 1505 aa17.93■□□□□ 0.46
GRAMD4-206ENST00000456069 WRNQ14191 1432 aaPredicted RBP eCLIP17.89■□□□□ 0.46
GRAMD4-206ENST00000456069 BIVM-ERCC5R4GMW8 1640 aa17.87■□□□□ 0.45
GRAMD4-206ENST00000456069 POLA1P09884 1462 aaPredicted RBP17.87■□□□□ 0.45
GRAMD4-206ENST00000456069 TOP2BQ02880 1626 aa17.87■□□□□ 0.45
GRAMD4-206ENST00000456069 IFT140Q96RY7 1462 aa17.86■□□□□ 0.45
GRAMD4-206ENST00000456069 FGD5Q6ZNL6 1462 aa17.83■□□□□ 0.45
GRAMD4-206ENST00000456069 SYNJ1O43426 1573 aa17.83■□□□□ 0.44
GRAMD4-206ENST00000456069 TARBP1Q13395 1621 aaKnown RBP17.82■□□□□ 0.44
GRAMD4-206ENST00000456069 WDR97A6NE52 1622 aa17.77■□□□□ 0.44
GRAMD4-206ENST00000456069 SOGA1O94964 1423 aa17.76■□□□□ 0.43
GRAMD4-206ENST00000456069 DNAJC5Q9H3Z4 198 aa17.74■□□□□ 0.43
GRAMD4-206ENST00000456069 ABCA10Q8WWZ4 1543 aa17.73■□□□□ 0.43
GRAMD4-206ENST00000456069 RAD54L2Q9Y4B4 1467 aa17.72■□□□□ 0.43
GRAMD4-206ENST00000456069 ZNF608Q9ULD9 1512 aaPredicted RBP17.7■□□□□ 0.42
GRAMD4-206ENST00000456069 EIF4G3O43432 1585 aaKnown RBP17.67■□□□□ 0.42
GRAMD4-206ENST00000456069 ABCA5Q8WWZ7 1642 aa17.64■□□□□ 0.41
GRAMD4-206ENST00000456069 AQRO60306 1485 aaKnown RBP eCLIP17.61■□□□□ 0.417e-7■■■■□ 24.9
GRAMD4-206ENST00000456069 TDRD9Q8NDG6 1382 aaKnown RBP17.6■□□□□ 0.41
GRAMD4-206ENST00000456069 GAPVD1Q14C86 1478 aa17.57■□□□□ 0.4
GRAMD4-206ENST00000456069 GRIN2BQ13224 1484 aa17.56■□□□□ 0.4
GRAMD4-206ENST00000456069 MAGI1Q96QZ7 1491 aaPredicted RBP17.53■□□□□ 0.4
GRAMD4-206ENST00000456069 ERICH3Q5RHP9 1530 aa17.52■□□□□ 0.4
GRAMD4-206ENST00000456069 PBRM1Q86U86 1689 aa17.52■□□□□ 0.4
GRAMD4-206ENST00000456069 TRIM41Q8WV44 630 aa17.51■□□□□ 0.39
GRAMD4-206ENST00000456069 KIF27Q86VH2 1401 aa17.5■□□□□ 0.39
GRAMD4-206ENST00000456069 CHIC1Q5VXU3 224 aa17.48■□□□□ 0.39
GRAMD4-206ENST00000456069 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
GRAMD4-206ENST00000456069 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
GRAMD4-206ENST00000456069 ADAMTS12P58397 1594 aa17.43■□□□□ 0.38
GRAMD4-206ENST00000456069 IGF1RP08069 1367 aa17.41■□□□□ 0.38
GRAMD4-206ENST00000456069 FHAD1B1AJZ9 1412 aa17.41■□□□□ 0.38
GRAMD4-206ENST00000456069 CUL7Q14999 1698 aa17.39■□□□□ 0.37
GRAMD4-206ENST00000456069 CHD1O14646 1710 aa17.38■□□□□ 0.37
GRAMD4-206ENST00000456069 EEA1Q15075 1411 aa17.37■□□□□ 0.37
GRAMD4-206ENST00000456069 RUSC2Q8N2Y8 1516 aa17.35■□□□□ 0.37
GRAMD4-206ENST00000456069 GRIN2AQ12879 1464 aa17.34■□□□□ 0.37
GRAMD4-206ENST00000456069 OSCARQ8IYS5 282 aa17.33■□□□□ 0.36
GRAMD4-206ENST00000456069 CHMP7Q8WUX9 453 aaPredicted RBP17.31■□□□□ 0.36
GRAMD4-206ENST00000456069 NUP160Q12769 1436 aa17.3■□□□□ 0.36
GRAMD4-206ENST00000456069 CARMIL1Q5VZK9 1371 aa17.29■□□□□ 0.36
GRAMD4-206ENST00000456069 CLASP1Q7Z460 1538 aa17.27■□□□□ 0.36
GRAMD4-206ENST00000456069 PRXQ9BXM0 1461 aa17.27■□□□□ 0.36
GRAMD4-206ENST00000456069 FBLN2P98095 1184 aa17.25■□□□□ 0.35
GRAMD4-206ENST00000456069 CEP170Q5SW79 1584 aa17.23■□□□□ 0.35
GRAMD4-206ENST00000456069 RAPGEF2Q9Y4G8 1499 aa17.23■□□□□ 0.35
GRAMD4-206ENST00000456069 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
GRAMD4-206ENST00000456069 KIAA0586Q9BVV6 1533 aa17.16■□□□□ 0.34
GRAMD4-206ENST00000456069 SHROOM2Q13796 1616 aa17.15■□□□□ 0.34
GRAMD4-206ENST00000456069 KIF21BO75037 1637 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms