RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 CUL7Q14999 1698 aa20.76■□□□□ 0.91
PDGFB-204ENST00000455790 JPH4Q96JJ6 628 aa20.72■□□□□ 0.91
PDGFB-204ENST00000455790 KIAA0586Q9BVV6 1533 aa20.67■□□□□ 0.9
PDGFB-204ENST00000455790 CARMIL1Q5VZK9 1371 aa20.66■□□□□ 0.9
PDGFB-204ENST00000455790 ADCY10Q96PN6 1610 aa20.53■□□□□ 0.88
PDGFB-204ENST00000455790 IQGAP2Q13576 1575 aa20.52■□□□□ 0.88
PDGFB-204ENST00000455790 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
PDGFB-204ENST00000455790 KIF13AQ9H1H9 1805 aa20.46■□□□□ 0.87
PDGFB-204ENST00000455790 MAPKBP1O60336 1514 aa20.44■□□□□ 0.86
PDGFB-204ENST00000455790 PTPRGP23470 1445 aa20.44■□□□□ 0.86
PDGFB-204ENST00000455790 DISP1Q96F81 1524 aa20.43■□□□□ 0.86
PDGFB-204ENST00000455790 TTBK1Q5TCY1 1321 aaPredicted RBP20.43■□□□□ 0.86
PDGFB-204ENST00000455790 CARMIL2Q6F5E8 1435 aa20.43■□□□□ 0.86
PDGFB-204ENST00000455790 TNIKQ9UKE5 1360 aa20.42■□□□□ 0.86
PDGFB-204ENST00000455790 UGGT2Q9NYU1 1516 aa20.4■□□□□ 0.86
PDGFB-204ENST00000455790 ABCC10Q5T3U5 1492 aa20.39■□□□□ 0.85
PDGFB-204ENST00000455790 DIP2BQ9P265 1576 aa20.38■□□□□ 0.85
PDGFB-204ENST00000455790 NPM1P06748 294 aaKnown RBP eCLIP20.38■□□□□ 0.85
PDGFB-204ENST00000455790 PRXQ9BXM0 1461 aa20.37■□□□□ 0.85
PDGFB-204ENST00000455790 KIAA0556O60303 1618 aa20.35■□□□□ 0.85
PDGFB-204ENST00000455790 FAM69CQ0P6D2 419 aa20.34■□□□□ 0.85
PDGFB-204ENST00000455790 ABCC2Q92887 1545 aa20.33■□□□□ 0.85
PDGFB-204ENST00000455790 CTTNBP2Q8WZ74 1663 aa20.33■□□□□ 0.85
PDGFB-204ENST00000455790 UHRF1BP1LA0JNW5 1464 aa20.3■□□□□ 0.84
PDGFB-204ENST00000455790 UACAQ9BZF9 1416 aa20.29■□□□□ 0.84
PDGFB-204ENST00000455790 ASXL2Q76L83 1435 aa20.25■□□□□ 0.83
PDGFB-204ENST00000455790 KDM5BQ9UGL1 1544 aa20.22■□□□□ 0.83
PDGFB-204ENST00000455790 GOLGA3Q08378 1498 aa20.2■□□□□ 0.82
PDGFB-204ENST00000455790 PLB1Q6P1J6 1458 aa20.2■□□□□ 0.82
PDGFB-204ENST00000455790 ZCCHC11Q5TAX3 1644 aaKnown RBP20.2■□□□□ 0.82
PDGFB-204ENST00000455790 CSRNP3Q8WYN3 585 aa20.19■□□□□ 0.82
PDGFB-204ENST00000455790 TSPOAP1O95153 1857 aa20.18■□□□□ 0.82
PDGFB-204ENST00000455790 ABCA8O94911 1581 aa20.15■□□□□ 0.82
PDGFB-204ENST00000455790 GLI2P10070 1586 aa20.15■□□□□ 0.82
PDGFB-204ENST00000455790 KDM6BO15054 1643 aa20.13■□□□□ 0.81
PDGFB-204ENST00000455790 EPRSP07814 1512 aaKnown RBP20.13■□□□□ 0.81
PDGFB-204ENST00000455790 EEA1Q15075 1411 aa20.13■□□□□ 0.81
PDGFB-204ENST00000455790 PPRC1Q5VV67 1664 aaKnown RBP20.13■□□□□ 0.81
PDGFB-204ENST00000455790 FAM9AQ8IZU1 332 aaPredicted RBP20.1■□□□□ 0.81
PDGFB-204ENST00000455790 SAMD9Q5K651 1589 aa20.08■□□□□ 0.81
PDGFB-204ENST00000455790 WDR7Q9Y4E6 1490 aa20.08■□□□□ 0.81
PDGFB-204ENST00000455790 P3H3Q8IVL6 736 aa20.08■□□□□ 0.81
PDGFB-204ENST00000455790 MAP3K4Q9Y6R4 1608 aa20.07■□□□□ 0.8
PDGFB-204ENST00000455790 AEBP2Q6ZN18 517 aaPredicted RBP20.03■□□□□ 0.8
PDGFB-204ENST00000455790 KIF21BO75037 1637 aa20.02■□□□□ 0.79
PDGFB-204ENST00000455790 CHIC1Q5VXU3 224 aa20.01■□□□□ 0.79
PDGFB-204ENST00000455790 ARID3CA6NKF2 412 aa20■□□□□ 0.79
PDGFB-204ENST00000455790 COL17A1Q9UMD9 1497 aaPredicted RBP19.99■□□□□ 0.79
PDGFB-204ENST00000455790 RANGAP1P46060 587 aaPredicted RBP19.98■□□□□ 0.79
PDGFB-204ENST00000455790 FHOD3Q2V2M9 1422 aa19.97■□□□□ 0.79
PDGFB-204ENST00000455790 ATP10BO94823 1461 aa19.97■□□□□ 0.79
PDGFB-204ENST00000455790 RAPGEF6Q8TEU7 1601 aa19.95■□□□□ 0.78
PDGFB-204ENST00000455790 TEX14Q8IWB6 1497 aa19.95■□□□□ 0.78
PDGFB-204ENST00000455790 KCNH8Q96L42 1107 aa19.94■□□□□ 0.78
PDGFB-204ENST00000455790 CFAP43Q8NDM7 1665 aa19.92■□□□□ 0.78
PDGFB-204ENST00000455790 EHMT2Q96KQ7 1210 aa19.91■□□□□ 0.78
PDGFB-204ENST00000455790 CD109Q6YHK3 1445 aa19.91■□□□□ 0.78
PDGFB-204ENST00000455790 NUP153P49790 1475 aaKnown RBP19.91■□□□□ 0.78
PDGFB-204ENST00000455790 MAGI3Q5TCQ9 1506 aa19.9■□□□□ 0.78
PDGFB-204ENST00000455790 EFCAB5A4FU69 1503 aa19.88■□□□□ 0.77
PDGFB-204ENST00000455790 KDM4FA0A1W2PPD8 638 aa19.86■□□□□ 0.77
PDGFB-204ENST00000455790 ABCA9Q8IUA7 1624 aa19.83■□□□□ 0.76
PDGFB-204ENST00000455790 UBTFP17480 764 aaKnown RBP19.8■□□□□ 0.76
PDGFB-204ENST00000455790 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.79■□□□□ 0.76
PDGFB-204ENST00000455790 HNRNPUL2Q1KMD3 747 aaKnown RBP19.79■□□□□ 0.76
PDGFB-204ENST00000455790 ADGRL1O94910 1474 aa19.77■□□□□ 0.76
PDGFB-204ENST00000455790 ARHGAP35Q9NRY4 1499 aa19.77■□□□□ 0.76
PDGFB-204ENST00000455790 CDK13Q14004 1512 aaKnown RBP19.75■□□□□ 0.75
PDGFB-204ENST00000455790 ARAP3Q8WWN8 1544 aa19.73■□□□□ 0.75
PDGFB-204ENST00000455790 NEO1Q92859 1461 aa19.68■□□□□ 0.74
PDGFB-204ENST00000455790 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.68■□□□□ 0.74
PDGFB-204ENST00000455790 TTC37Q6PGP7 1564 aa19.68■□□□□ 0.74
PDGFB-204ENST00000455790 FMN1Q68DA7 1419 aa19.68■□□□□ 0.74
PDGFB-204ENST00000455790 HECW1Q76N89 1606 aa19.67■□□□□ 0.74
PDGFB-204ENST00000455790 PLEKHD1A6NEE1 506 aa19.67■□□□□ 0.74
PDGFB-204ENST00000455790 FRMPD1Q5SYB0 1578 aa19.66■□□□□ 0.74
PDGFB-204ENST00000455790 PHLDB1Q86UU1 1377 aa19.64■□□□□ 0.73
PDGFB-204ENST00000455790 RAPGEF3O95398 923 aa19.63■□□□□ 0.73
PDGFB-204ENST00000455790 ATP1B4Q9UN42 357 aaPredicted RBP19.62■□□□□ 0.73
PDGFB-204ENST00000455790 FANCAO15360 1455 aa19.6■□□□□ 0.73
PDGFB-204ENST00000455790 LRRIQ1Q96JM4 1722 aa19.59■□□□□ 0.73
PDGFB-204ENST00000455790 PCF11O94913 1555 aaKnown RBP19.57■□□□□ 0.72
PDGFB-204ENST00000455790 AKNAQ7Z591 1439 aa19.57■□□□□ 0.72
PDGFB-204ENST00000455790 KIF14Q15058 1648 aa19.56■□□□□ 0.72
PDGFB-204ENST00000455790 CFAP74Q9C0B2 1584 aa19.56■□□□□ 0.72
PDGFB-204ENST00000455790 RICTORQ6R327 1708 aa19.55■□□□□ 0.72
PDGFB-204ENST00000455790 DENND4BO75064 1496 aaPredicted RBP19.54■□□□□ 0.72
PDGFB-204ENST00000455790 PLCH2O75038 1416 aa19.52■□□□□ 0.72
PDGFB-204ENST00000455790 TROQ12816 1431 aaPredicted RBP19.52■□□□□ 0.72
PDGFB-204ENST00000455790 ARHGEF40Q8TER5 1519 aa19.52■□□□□ 0.72
PDGFB-204ENST00000455790 CASKIN1Q8WXD9 1431 aa19.51■□□□□ 0.71
PDGFB-204ENST00000455790 CLIP1P30622 1438 aa19.5■□□□□ 0.71
PDGFB-204ENST00000455790 ZMYM4Q5VZL5 1548 aa19.49■□□□□ 0.71
PDGFB-204ENST00000455790 MYO5CQ9NQX4 1742 aa19.48■□□□□ 0.71
PDGFB-204ENST00000455790 CDK11AQ9UQ88 783 aaPredicted RBP19.48■□□□□ 0.71
PDGFB-204ENST00000455790 ADAMTSL3P82987 1691 aa19.46■□□□□ 0.71
PDGFB-204ENST00000455790 POGZQ7Z3K3 1410 aa19.46■□□□□ 0.71
PDGFB-204ENST00000455790 CCDC18Q5T9S5 1454 aa19.46■□□□□ 0.71
PDGFB-204ENST00000455790 FYCO1Q9BQS8 1478 aa19.46■□□□□ 0.71
PDGFB-204ENST00000455790 SCAPERQ9BY12 1400 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms