RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 FHAD1B1AJZ9 1412 aa14.31□□□□□ -0.12
NIF3L1-209ENST00000454952 NUP160Q12769 1436 aa14.31□□□□□ -0.12
NIF3L1-209ENST00000454952 ERICH3Q5RHP9 1530 aa14.31□□□□□ -0.12
NIF3L1-209ENST00000454952 ADRA2BP18089 450 aa14.29□□□□□ -0.12
NIF3L1-209ENST00000454952 CEP170Q5SW79 1584 aa14.27□□□□□ -0.12
NIF3L1-209ENST00000454952 SHROOM2Q13796 1616 aa14.26□□□□□ -0.13
NIF3L1-209ENST00000454952 ERCC6L2Q5T890 1561 aa14.22□□□□□ -0.13
NIF3L1-209ENST00000454952 PRG4Q92954 1404 aaPredicted RBP14.16□□□□□ -0.14
NIF3L1-209ENST00000454952 JPH4Q96JJ6 628 aa14.15□□□□□ -0.14
NIF3L1-209ENST00000454952 RUSC2Q8N2Y8 1516 aa14.14□□□□□ -0.15
NIF3L1-209ENST00000454952 NPM1P06748 294 aaKnown RBP eCLIP14.1□□□□□ -0.15
NIF3L1-209ENST00000454952 KIF13AQ9H1H9 1805 aa14.1□□□□□ -0.15
NIF3L1-209ENST00000454952 CUL7Q14999 1698 aa14.1□□□□□ -0.15
NIF3L1-209ENST00000454952 KIF27Q86VH2 1401 aa14.09□□□□□ -0.15
NIF3L1-209ENST00000454952 KIAA0586Q9BVV6 1533 aa14.07□□□□□ -0.16
NIF3L1-209ENST00000454952 MAPKBP1O60336 1514 aa14.05□□□□□ -0.16
NIF3L1-209ENST00000454952 IGF1RP08069 1367 aa14.04□□□□□ -0.16
NIF3L1-209ENST00000454952 ABCC10Q5T3U5 1492 aa14.04□□□□□ -0.16
NIF3L1-209ENST00000454952 ADCY10Q96PN6 1610 aa14.01□□□□□ -0.17
NIF3L1-209ENST00000454952 FAM69CQ0P6D2 419 aa14.01□□□□□ -0.17
NIF3L1-209ENST00000454952 DIP2BQ9P265 1576 aa13.99□□□□□ -0.17
NIF3L1-209ENST00000454952 CARMIL2Q6F5E8 1435 aa13.97□□□□□ -0.17
NIF3L1-209ENST00000454952 CARMIL1Q5VZK9 1371 aa13.96□□□□□ -0.17
NIF3L1-209ENST00000454952 PTPRGP23470 1445 aa13.95□□□□□ -0.18
NIF3L1-209ENST00000454952 TNIKQ9UKE5 1360 aa13.93□□□□□ -0.18
NIF3L1-209ENST00000454952 IQGAP2Q13576 1575 aa13.92□□□□□ -0.18
NIF3L1-209ENST00000454952 KDM6BO15054 1643 aa13.91□□□□□ -0.18
NIF3L1-209ENST00000454952 TSPOAP1O95153 1857 aa13.9□□□□□ -0.18
NIF3L1-209ENST00000454952 ABCC2Q92887 1545 aa13.9□□□□□ -0.19
NIF3L1-209ENST00000454952 UHRF1BP1LA0JNW5 1464 aa13.87□□□□□ -0.19
NIF3L1-209ENST00000454952 PLB1Q6P1J6 1458 aa13.87□□□□□ -0.19
NIF3L1-209ENST00000454952 GLI2P10070 1586 aa13.85□□□□□ -0.19
NIF3L1-209ENST00000454952 RAPGEF2Q9Y4G8 1499 aa13.85□□□□□ -0.19
NIF3L1-209ENST00000454952 UACAQ9BZF9 1416 aa13.84□□□□□ -0.19
NIF3L1-209ENST00000454952 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
NIF3L1-209ENST00000454952 ASXL2Q76L83 1435 aa13.83□□□□□ -0.2
NIF3L1-209ENST00000454952 UGGT2Q9NYU1 1516 aa13.83□□□□□ -0.2
NIF3L1-209ENST00000454952 DISP1Q96F81 1524 aa13.82□□□□□ -0.2
NIF3L1-209ENST00000454952 KDM5BQ9UGL1 1544 aa13.79□□□□□ -0.2
NIF3L1-209ENST00000454952 KIAA0556O60303 1618 aa13.78□□□□□ -0.2
NIF3L1-209ENST00000454952 PPRC1Q5VV67 1664 aaKnown RBP13.77□□□□□ -0.21
NIF3L1-209ENST00000454952 TEX14Q8IWB6 1497 aa13.77□□□□□ -0.21
NIF3L1-209ENST00000454952 CTTNBP2Q8WZ74 1663 aa13.76□□□□□ -0.21
NIF3L1-209ENST00000454952 GOLGA3Q08378 1498 aa13.76□□□□□ -0.21
NIF3L1-209ENST00000454952 ZCCHC11Q5TAX3 1644 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-209ENST00000454952 MAP3K4Q9Y6R4 1608 aa13.75□□□□□ -0.21
NIF3L1-209ENST00000454952 EPRSP07814 1512 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-209ENST00000454952 KDM4FA0A1W2PPD8 638 aa13.74□□□□□ -0.21
NIF3L1-209ENST00000454952 FAM9AQ8IZU1 332 aaPredicted RBP13.72□□□□□ -0.21
NIF3L1-209ENST00000454952 WDR7Q9Y4E6 1490 aa13.71□□□□□ -0.21
NIF3L1-209ENST00000454952 CFAP43Q8NDM7 1665 aa13.66□□□□□ -0.22
NIF3L1-209ENST00000454952 ADGRL1O94910 1474 aa13.66□□□□□ -0.22
NIF3L1-209ENST00000454952 PRXQ9BXM0 1461 aa13.66□□□□□ -0.22
NIF3L1-209ENST00000454952 ABCA8O94911 1581 aa13.66□□□□□ -0.22
NIF3L1-209ENST00000454952 MAGI3Q5TCQ9 1506 aa13.64□□□□□ -0.23
NIF3L1-209ENST00000454952 COL17A1Q9UMD9 1497 aaPredicted RBP13.63□□□□□ -0.23
NIF3L1-209ENST00000454952 CD109Q6YHK3 1445 aa13.63□□□□□ -0.23
NIF3L1-209ENST00000454952 KCNH8Q96L42 1107 aa13.59□□□□□ -0.23
NIF3L1-209ENST00000454952 PHLDB1Q86UU1 1377 aa13.56□□□□□ -0.24
NIF3L1-209ENST00000454952 KCNA4P22459 653 aa13.55□□□□□ -0.24
NIF3L1-209ENST00000454952 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
NIF3L1-209ENST00000454952 CSRNP3Q8WYN3 585 aa13.53□□□□□ -0.24
NIF3L1-209ENST00000454952 EEA1Q15075 1411 aa13.53□□□□□ -0.24
NIF3L1-209ENST00000454952 SAMD9Q5K651 1589 aa13.53□□□□□ -0.24
NIF3L1-209ENST00000454952 ATP10BO94823 1461 aa13.52□□□□□ -0.25
NIF3L1-209ENST00000454952 ABCA9Q8IUA7 1624 aa13.52□□□□□ -0.25
NIF3L1-209ENST00000454952 RAPGEF6Q8TEU7 1601 aa13.51□□□□□ -0.25
NIF3L1-209ENST00000454952 HECW2Q9P2P5 1572 aa13.49□□□□□ -0.25
NIF3L1-209ENST00000454952 P3H3Q8IVL6 736 aa13.49□□□□□ -0.25
NIF3L1-209ENST00000454952 NEO1Q92859 1461 aa13.48□□□□□ -0.25
NIF3L1-209ENST00000454952 KIF21BO75037 1637 aa13.47□□□□□ -0.25
NIF3L1-209ENST00000454952 ARID3CA6NKF2 412 aa13.46□□□□□ -0.25
NIF3L1-209ENST00000454952 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.46□□□□□ -0.25
NIF3L1-209ENST00000454952 HNRNPUL2Q1KMD3 747 aaKnown RBP13.46□□□□□ -0.25
NIF3L1-209ENST00000454952 PPP4R3CPQ6ZMV5 832 aa13.43□□□□□ -0.26
NIF3L1-209ENST00000454952 ILDR1Q86SU0 546 aaPredicted RBP13.43□□□□□ -0.26
NIF3L1-209ENST00000454952 EFCAB5A4FU69 1503 aa13.43□□□□□ -0.26
NIF3L1-209ENST00000454952 NUP153P49790 1475 aaKnown RBP13.42□□□□□ -0.26
NIF3L1-209ENST00000454952 CFAP74Q9C0B2 1584 aa13.41□□□□□ -0.26
NIF3L1-209ENST00000454952 PLEKHD1A6NEE1 506 aa13.41□□□□□ -0.26
NIF3L1-209ENST00000454952 ADAMTSL3P82987 1691 aa13.4□□□□□ -0.26
NIF3L1-209ENST00000454952 FHOD3Q2V2M9 1422 aa13.39□□□□□ -0.27
NIF3L1-209ENST00000454952 RAPGEF3O95398 923 aa13.38□□□□□ -0.27
NIF3L1-209ENST00000454952 FRMPD1Q5SYB0 1578 aa13.37□□□□□ -0.27
NIF3L1-209ENST00000454952 DENND4BO75064 1496 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-209ENST00000454952 PTPRMP28827 1452 aa13.36□□□□□ -0.27
NIF3L1-209ENST00000454952 BCORL1Q5H9F3 1711 aa13.36□□□□□ -0.27
NIF3L1-209ENST00000454952 RANGAP1P46060 587 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-209ENST00000454952 ARID4BQ4LE39 1312 aaPredicted RBP13.36□□□□□ -0.27
NIF3L1-209ENST00000454952 ARHGEF40Q8TER5 1519 aa13.35□□□□□ -0.27
NIF3L1-209ENST00000454952 FANCAO15360 1455 aa13.35□□□□□ -0.27
NIF3L1-209ENST00000454952 RICTORQ6R327 1708 aa13.34□□□□□ -0.27
NIF3L1-209ENST00000454952 AKNAQ7Z591 1439 aa13.34□□□□□ -0.27
NIF3L1-209ENST00000454952 POGZQ7Z3K3 1410 aa13.33□□□□□ -0.28
NIF3L1-209ENST00000454952 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.33□□□□□ -0.28
NIF3L1-209ENST00000454952 ZMYM4Q5VZL5 1548 aa13.32□□□□□ -0.28
NIF3L1-209ENST00000454952 MAGI2Q86UL8 1455 aa13.31□□□□□ -0.28
NIF3L1-209ENST00000454952 MADDQ8WXG6 1647 aa13.31□□□□□ -0.28
NIF3L1-209ENST00000454952 FMN1Q68DA7 1419 aa13.3□□□□□ -0.28
NIF3L1-209ENST00000454952 TTC37Q6PGP7 1564 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms