RNA–Protein interactions for RNA: ENST00000454233.6

DDX39A-203, Transcript of DExD-box helicase 39A, humanhuman

TSL 3 BASIC

Gene DDX39A, Length 922 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-203ENST00000454233 PRG4Q92954 1404 aaPredicted RBP18.27■□□□□ 0.52
DDX39A-203ENST00000454233 RUSC2Q8N2Y8 1516 aa18.27■□□□□ 0.51
DDX39A-203ENST00000454233 CARMIL1Q5VZK9 1371 aa18.27■□□□□ 0.51
DDX39A-203ENST00000454233 KIAA0586Q9BVV6 1533 aa18.23■□□□□ 0.51
DDX39A-203ENST00000454233 RAPGEF2Q9Y4G8 1499 aa18.14■□□□□ 0.49
DDX39A-203ENST00000454233 IQGAP2Q13576 1575 aa18.09■□□□□ 0.49
DDX39A-203ENST00000454233 CARMIL2Q6F5E8 1435 aa18.08■□□□□ 0.49
DDX39A-203ENST00000454233 NPM1P06748 294 aaKnown RBP eCLIP18.07■□□□□ 0.48
DDX39A-203ENST00000454233 PTPRGP23470 1445 aa18.04■□□□□ 0.48
DDX39A-203ENST00000454233 TNIKQ9UKE5 1360 aa18.03■□□□□ 0.48
DDX39A-203ENST00000454233 TTBK1Q5TCY1 1321 aaPredicted RBP18.01■□□□□ 0.47
DDX39A-203ENST00000454233 ADCY10Q96PN6 1610 aa18■□□□□ 0.47
DDX39A-203ENST00000454233 PRXQ9BXM0 1461 aa17.98■□□□□ 0.47
DDX39A-203ENST00000454233 UGGT2Q9NYU1 1516 aa17.98■□□□□ 0.47
DDX39A-203ENST00000454233 DISP1Q96F81 1524 aa17.96■□□□□ 0.47
DDX39A-203ENST00000454233 MAPKBP1O60336 1514 aa17.94■□□□□ 0.46
DDX39A-203ENST00000454233 CTTNBP2Q8WZ74 1663 aa17.94■□□□□ 0.46
DDX39A-203ENST00000454233 CSRNP3Q8WYN3 585 aa17.94■□□□□ 0.46
DDX39A-203ENST00000454233 EEA1Q15075 1411 aa17.92■□□□□ 0.46
DDX39A-203ENST00000454233 KIAA0556O60303 1618 aa17.91■□□□□ 0.46
DDX39A-203ENST00000454233 FAM69CQ0P6D2 419 aa17.91■□□□□ 0.46
DDX39A-203ENST00000454233 KIF13AQ9H1H9 1805 aa17.91■□□□□ 0.46
DDX39A-203ENST00000454233 ABCC10Q5T3U5 1492 aa17.9■□□□□ 0.46
DDX39A-203ENST00000454233 UACAQ9BZF9 1416 aa17.89■□□□□ 0.46
DDX39A-203ENST00000454233 GOLGA3Q08378 1498 aa17.89■□□□□ 0.45
DDX39A-203ENST00000454233 ABCC2Q92887 1545 aa17.88■□□□□ 0.45
DDX39A-203ENST00000454233 UHRF1BP1LA0JNW5 1464 aa17.88■□□□□ 0.45
DDX39A-203ENST00000454233 DIP2BQ9P265 1576 aa17.85■□□□□ 0.45
DDX39A-203ENST00000454233 FAM9AQ8IZU1 332 aaPredicted RBP17.83■□□□□ 0.44
DDX39A-203ENST00000454233 CHIC1Q5VXU3 224 aa17.81■□□□□ 0.44
DDX39A-203ENST00000454233 PLB1Q6P1J6 1458 aa17.81■□□□□ 0.44
DDX39A-203ENST00000454233 ASXL2Q76L83 1435 aa17.81■□□□□ 0.44
DDX39A-203ENST00000454233 KDM5BQ9UGL1 1544 aa17.79■□□□□ 0.44
DDX39A-203ENST00000454233 ZCCHC11Q5TAX3 1644 aaKnown RBP17.74■□□□□ 0.43
DDX39A-203ENST00000454233 P3H3Q8IVL6 736 aa17.74■□□□□ 0.43
DDX39A-203ENST00000454233 ABCA8O94911 1581 aa17.73■□□□□ 0.43
DDX39A-203ENST00000454233 TSPOAP1O95153 1857 aa17.72■□□□□ 0.43
DDX39A-203ENST00000454233 KIF21BO75037 1637 aa17.72■□□□□ 0.43
DDX39A-203ENST00000454233 GLI2P10070 1586 aa17.71■□□□□ 0.43
DDX39A-203ENST00000454233 SAMD9Q5K651 1589 aa17.7■□□□□ 0.42
DDX39A-203ENST00000454233 EPRSP07814 1512 aaKnown RBP17.69■□□□□ 0.42
DDX39A-203ENST00000454233 RANGAP1P46060 587 aaPredicted RBP17.69■□□□□ 0.42
DDX39A-203ENST00000454233 WDR7Q9Y4E6 1490 aa17.67■□□□□ 0.42
DDX39A-203ENST00000454233 KDM6BO15054 1643 aa17.65■□□□□ 0.42
DDX39A-203ENST00000454233 UBTFP17480 764 aaKnown RBP17.63■□□□□ 0.41
DDX39A-203ENST00000454233 EHMT2Q96KQ7 1210 aa17.62■□□□□ 0.41
DDX39A-203ENST00000454233 ARID3CA6NKF2 412 aa17.61■□□□□ 0.41
DDX39A-203ENST00000454233 KCNH8Q96L42 1107 aa17.61■□□□□ 0.41
DDX39A-203ENST00000454233 FHOD3Q2V2M9 1422 aa17.61■□□□□ 0.41
DDX39A-203ENST00000454233 MAP3K4Q9Y6R4 1608 aa17.61■□□□□ 0.41
DDX39A-203ENST00000454233 TEX14Q8IWB6 1497 aa17.6■□□□□ 0.41
DDX39A-203ENST00000454233 EFCAB5A4FU69 1503 aa17.6■□□□□ 0.41
DDX39A-203ENST00000454233 RAPGEF6Q8TEU7 1601 aa17.6■□□□□ 0.41
DDX39A-203ENST00000454233 PPRC1Q5VV67 1664 aaKnown RBP17.6■□□□□ 0.41
DDX39A-203ENST00000454233 ATP10BO94823 1461 aa17.59■□□□□ 0.41
DDX39A-203ENST00000454233 AEBP2Q6ZN18 517 aaPredicted RBP17.59■□□□□ 0.41
DDX39A-203ENST00000454233 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.56■□□□□ 0.4
DDX39A-203ENST00000454233 HNRNPUL2Q1KMD3 747 aaKnown RBP17.56■□□□□ 0.4
DDX39A-203ENST00000454233 CD109Q6YHK3 1445 aa17.55■□□□□ 0.4
DDX39A-203ENST00000454233 CFAP43Q8NDM7 1665 aa17.54■□□□□ 0.4
DDX39A-203ENST00000454233 NUP153P49790 1475 aaKnown RBP17.52■□□□□ 0.4
DDX39A-203ENST00000454233 MAGI3Q5TCQ9 1506 aa17.51■□□□□ 0.39
DDX39A-203ENST00000454233 PLEKHD1A6NEE1 506 aa17.47■□□□□ 0.39
DDX39A-203ENST00000454233 COL17A1Q9UMD9 1497 aaPredicted RBP17.47■□□□□ 0.39
DDX39A-203ENST00000454233 FMN1Q68DA7 1419 aa17.46■□□□□ 0.39
DDX39A-203ENST00000454233 ARHGAP35Q9NRY4 1499 aa17.45■□□□□ 0.38
DDX39A-203ENST00000454233 ABCA9Q8IUA7 1624 aa17.44■□□□□ 0.38
DDX39A-203ENST00000454233 ATP1B4Q9UN42 357 aaPredicted RBP17.43■□□□□ 0.38
DDX39A-203ENST00000454233 PHLDB1Q86UU1 1377 aa17.4■□□□□ 0.38
DDX39A-203ENST00000454233 HECW1Q76N89 1606 aa17.39■□□□□ 0.37
DDX39A-203ENST00000454233 CDK13Q14004 1512 aaKnown RBP17.38■□□□□ 0.37
DDX39A-203ENST00000454233 ARAP3Q8WWN8 1544 aa17.37■□□□□ 0.37
DDX39A-203ENST00000454233 KDM4FA0A1W2PPD8 638 aa17.35■□□□□ 0.37
DDX39A-203ENST00000454233 CDK11AQ9UQ88 783 aaPredicted RBP17.35■□□□□ 0.37
DDX39A-203ENST00000454233 NEO1Q92859 1461 aa17.35■□□□□ 0.37
DDX39A-203ENST00000454233 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.31■□□□□ 0.364e-7■■□□□ 11.9
DDX39A-203ENST00000454233 CLIP1P30622 1438 aa17.3■□□□□ 0.36
DDX39A-203ENST00000454233 ADGRL1O94910 1474 aa17.29■□□□□ 0.36
DDX39A-203ENST00000454233 TTC37Q6PGP7 1564 aa17.28■□□□□ 0.36
DDX39A-203ENST00000454233 RAPGEF3O95398 923 aa17.28■□□□□ 0.36
DDX39A-203ENST00000454233 CFAP74Q9C0B2 1584 aa17.28■□□□□ 0.36
DDX39A-203ENST00000454233 FANCAO15360 1455 aa17.27■□□□□ 0.36
DDX39A-203ENST00000454233 CASKIN1Q8WXD9 1431 aa17.27■□□□□ 0.35
DDX39A-203ENST00000454233 AKNAQ7Z591 1439 aa17.26■□□□□ 0.35
DDX39A-203ENST00000454233 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
DDX39A-203ENST00000454233 TROQ12816 1431 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-203ENST00000454233 CCDC18Q5T9S5 1454 aa17.24■□□□□ 0.35
DDX39A-203ENST00000454233 DENND4BO75064 1496 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-203ENST00000454233 PLCH2O75038 1416 aa17.23■□□□□ 0.35
DDX39A-203ENST00000454233 KIF14Q15058 1648 aa17.23■□□□□ 0.35
DDX39A-203ENST00000454233 FYCO1Q9BQS8 1478 aa17.23■□□□□ 0.35
DDX39A-203ENST00000454233 LRRIQ1Q96JM4 1722 aa17.22■□□□□ 0.35
DDX39A-203ENST00000454233 FRMPD1Q5SYB0 1578 aa17.2■□□□□ 0.34
DDX39A-203ENST00000454233 EFCAB2Q5VUJ9 269 aa17.2■□□□□ 0.34
DDX39A-203ENST00000454233 MYO5CQ9NQX4 1742 aa17.19■□□□□ 0.34
DDX39A-203ENST00000454233 RICTORQ6R327 1708 aa17.17■□□□□ 0.34
DDX39A-203ENST00000454233 SCAPERQ9BY12 1400 aa17.16■□□□□ 0.34
DDX39A-203ENST00000454233 CEP162Q5TB80 1403 aa17.15■□□□□ 0.34
DDX39A-203ENST00000454233 ARHGAP5Q13017 1502 aa17.15■□□□□ 0.34
DDX39A-203ENST00000454233 ARID4BQ4LE39 1312 aaPredicted RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 184.4 ms