RNA–Protein interactions for RNA: ENST00000453310.5

RBM39-219, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,068 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-219ENST00000453310 SHROOM2Q13796 1616 aa25.86■■□□□ 1.73
RBM39-219ENST00000453310 ARHGEF11O15085 1522 aa25.85■■□□□ 1.73
RBM39-219ENST00000453310 CTTNBP2Q8WZ74 1663 aa25.85■■□□□ 1.73
RBM39-219ENST00000453310 IQGAP2Q13576 1575 aa25.84■■□□□ 1.73
RBM39-219ENST00000453310 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
RBM39-219ENST00000453310 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
RBM39-219ENST00000453310 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
RBM39-219ENST00000453310 JPH4Q96JJ6 628 aa25.79■■□□□ 1.72
RBM39-219ENST00000453310 GOLGA3Q08378 1498 aa25.79■■□□□ 1.72
RBM39-219ENST00000453310 ERCC6L2Q5T890 1561 aa25.74■■□□□ 1.71
RBM39-219ENST00000453310 PRG4Q92954 1404 aaPredicted RBP25.74■■□□□ 1.71
RBM39-219ENST00000453310 EHMT2Q96KQ7 1210 aa25.72■■□□□ 1.71
RBM39-219ENST00000453310 UGGT2Q9NYU1 1516 aa25.7■■□□□ 1.7
RBM39-219ENST00000453310 ARAP1Q96P48 1450 aa25.66■■□□□ 1.7
RBM39-219ENST00000453310 UBTFP17480 764 aaKnown RBP25.65■■□□□ 1.7
RBM39-219ENST00000453310 DISP1Q96F81 1524 aa25.62■■□□□ 1.69
RBM39-219ENST00000453310 CARMIL2Q6F5E8 1435 aa25.62■■□□□ 1.69
RBM39-219ENST00000453310 KIAA0556O60303 1618 aa25.59■■□□□ 1.69
RBM39-219ENST00000453310 CYB5RLQ6IPT4 315 aa25.55■■□□□ 1.68
RBM39-219ENST00000453310 SAMD9Q5K651 1589 aa25.52■■□□□ 1.68
RBM39-219ENST00000453310 TNIKQ9UKE5 1360 aa25.52■■□□□ 1.68
RBM39-219ENST00000453310 RANGAP1P46060 587 aaPredicted RBP25.5■■□□□ 1.67
RBM39-219ENST00000453310 EFCAB5A4FU69 1503 aa25.47■■□□□ 1.67
RBM39-219ENST00000453310 PTPRGP23470 1445 aa25.46■■□□□ 1.67
RBM39-219ENST00000453310 LOC105371045A0A1W2PR82 267 aa25.43■■□□□ 1.66
RBM39-219ENST00000453310 TTBK1Q5TCY1 1321 aaPredicted RBP25.42■■□□□ 1.66
RBM39-219ENST00000453310 P3H3Q8IVL6 736 aa25.41■■□□□ 1.66
RBM39-219ENST00000453310 ARHGAP35Q9NRY4 1499 aa25.38■■□□□ 1.65
RBM39-219ENST00000453310 FHOD3Q2V2M9 1422 aa25.37■■□□□ 1.65
RBM39-219ENST00000453310 ADCY10Q96PN6 1610 aa25.34■■□□□ 1.65
RBM39-219ENST00000453310 CLIP1P30622 1438 aa25.31■■□□□ 1.64
RBM39-219ENST00000453310 UACAQ9BZF9 1416 aa25.31■■□□□ 1.64
RBM39-219ENST00000453310 CEP162Q5TB80 1403 aa25.29■■□□□ 1.64
RBM39-219ENST00000453310 PLB1Q6P1J6 1458 aa25.29■■□□□ 1.64
RBM39-219ENST00000453310 UHRF1BP1LA0JNW5 1464 aa25.28■■□□□ 1.64
RBM39-219ENST00000453310 ABCC2Q92887 1545 aa25.28■■□□□ 1.64
RBM39-219ENST00000453310 ABCA8O94911 1581 aa25.28■■□□□ 1.64
RBM39-219ENST00000453310 RAPGEF6Q8TEU7 1601 aa25.22■■□□□ 1.63
RBM39-219ENST00000453310 FMN1Q68DA7 1419 aa25.2■■□□□ 1.63
RBM39-219ENST00000453310 NPM1P06748 294 aaKnown RBP eCLIP25.16■■□□□ 1.62
RBM39-219ENST00000453310 KDM5BQ9UGL1 1544 aa25.16■■□□□ 1.62
RBM39-219ENST00000453310 ZCCHC11Q5TAX3 1644 aaKnown RBP25.13■■□□□ 1.61
RBM39-219ENST00000453310 NUP153P49790 1475 aaKnown RBP25.11■■□□□ 1.61
RBM39-219ENST00000453310 MAPKBP1O60336 1514 aa25.11■■□□□ 1.61
RBM39-219ENST00000453310 PCF11O94913 1555 aaKnown RBP25.08■■□□□ 1.61
RBM39-219ENST00000453310 HECW1Q76N89 1606 aa25.08■■□□□ 1.6
RBM39-219ENST00000453310 ATP10BO94823 1461 aa25.06■■□□□ 1.6
RBM39-219ENST00000453310 ARID3CA6NKF2 412 aa25.05■■□□□ 1.6
RBM39-219ENST00000453310 CASKIN1Q8WXD9 1431 aa25.04■■□□□ 1.6
RBM39-219ENST00000453310 FYCO1Q9BQS8 1478 aa25.02■■□□□ 1.6
RBM39-219ENST00000453310 ASXL2Q76L83 1435 aa25.02■■□□□ 1.6
RBM39-219ENST00000453310 ATP1B4Q9UN42 357 aaPredicted RBP25.01■■□□□ 1.59
RBM39-219ENST00000453310 EPRSP07814 1512 aaKnown RBP24.98■■□□□ 1.59
RBM39-219ENST00000453310 CDK13Q14004 1512 aaKnown RBP24.98■■□□□ 1.59
RBM39-219ENST00000453310 LRRIQ1Q96JM4 1722 aa24.98■■□□□ 1.59
RBM39-219ENST00000453310 VPS8Q8N3P4 1428 aa24.96■■□□□ 1.59
RBM39-219ENST00000453310 WDR7Q9Y4E6 1490 aa24.96■■□□□ 1.59
RBM39-219ENST00000453310 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.95■■□□□ 1.58
RBM39-219ENST00000453310 HNRNPUL2Q1KMD3 747 aaKnown RBP24.95■■□□□ 1.58
RBM39-219ENST00000453310 ABCC10Q5T3U5 1492 aa24.94■■□□□ 1.58
RBM39-219ENST00000453310 DIP2BQ9P265 1576 aa24.93■■□□□ 1.58
RBM39-219ENST00000453310 CCDC18Q5T9S5 1454 aa24.93■■□□□ 1.58
RBM39-219ENST00000453310 TRHP20396 242 aaPredicted RBP24.92■■□□□ 1.58
RBM39-219ENST00000453310 KIF13AQ9H1H9 1805 aa24.91■■□□□ 1.58
RBM39-219ENST00000453310 FAM69CQ0P6D2 419 aa24.85■■□□□ 1.57
RBM39-219ENST00000453310 GLI2P10070 1586 aa24.84■■□□□ 1.57
RBM39-219ENST00000453310 PLEKHD1A6NEE1 506 aa24.84■■□□□ 1.57
RBM39-219ENST00000453310 KCNH8Q96L42 1107 aa24.81■■□□□ 1.56
RBM39-219ENST00000453310 CDK11AQ9UQ88 783 aaPredicted RBP24.81■■□□□ 1.56
RBM39-219ENST00000453310 CFAP43Q8NDM7 1665 aa24.78■■□□□ 1.56
RBM39-219ENST00000453310 TROQ12816 1431 aaPredicted RBP24.78■■□□□ 1.56
RBM39-219ENST00000453310 MAGI3Q5TCQ9 1506 aa24.76■■□□□ 1.55
RBM39-219ENST00000453310 MAP3K4Q9Y6R4 1608 aa24.75■■□□□ 1.55
RBM39-219ENST00000453310 TIAM1Q13009 1591 aa24.75■■□□□ 1.55
RBM39-219ENST00000453310 ABCA9Q8IUA7 1624 aa24.74■■□□□ 1.55
RBM39-219ENST00000453310 KIF14Q15058 1648 aa24.72■■□□□ 1.55
RBM39-219ENST00000453310 TSPOAP1O95153 1857 aa24.71■■□□□ 1.55
RBM39-219ENST00000453310 MAP3K1Q13233 1512 aa24.71■■□□□ 1.55
RBM39-219ENST00000453310 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.7■■□□□ 1.54
RBM39-219ENST00000453310 MTUS2Q5JR59 1369 aa24.68■■□□□ 1.54
RBM39-219ENST00000453310 TTC37Q6PGP7 1564 aa24.68■■□□□ 1.54
RBM39-219ENST00000453310 EHBP1L1Q8N3D4 1523 aa24.68■■□□□ 1.54
RBM39-219ENST00000453310 CD109Q6YHK3 1445 aa24.68■■□□□ 1.54
RBM39-219ENST00000453310 PPRC1Q5VV67 1664 aaKnown RBP24.67■■□□□ 1.54
RBM39-219ENST00000453310 APLP2Q06481 763 aa24.64■■□□□ 1.54
RBM39-219ENST00000453310 LRRC9Q6ZRR7 1453 aa24.63■■□□□ 1.53
RBM39-219ENST00000453310 TEX14Q8IWB6 1497 aa24.6■■□□□ 1.53
RBM39-219ENST00000453310 MYO5CQ9NQX4 1742 aa24.58■■□□□ 1.52
RBM39-219ENST00000453310 SUPT6HQ7KZ85 1726 aaKnown RBP24.56■■□□□ 1.52
RBM39-219ENST00000453310 KANK4Q5T7N3 995 aaPredicted RBP24.56■■□□□ 1.52
RBM39-219ENST00000453310 PLCH2O75038 1416 aa24.53■■□□□ 1.52
RBM39-219ENST00000453310 ARAP3Q8WWN8 1544 aa24.52■■□□□ 1.52
RBM39-219ENST00000453310 PREX2Q70Z35 1606 aa24.52■■□□□ 1.52
RBM39-219ENST00000453310 CDC42BPAQ5VT25 1732 aa24.52■■□□□ 1.52
RBM39-219ENST00000453310 NCOA2Q15596 1464 aa24.51■■□□□ 1.51
RBM39-219ENST00000453310 CFAP74Q9C0B2 1584 aa24.5■■□□□ 1.51
RBM39-219ENST00000453310 FANCAO15360 1455 aa24.49■■□□□ 1.51
RBM39-219ENST00000453310 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
RBM39-219ENST00000453310 ARHGAP5Q13017 1502 aa24.48■■□□□ 1.51
RBM39-219ENST00000453310 NEO1Q92859 1461 aa24.48■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms