RNA–Protein interactions for RNA: ENST00000450271.5

PBRM1-217, Transcript of polybromo 1, humanhuman

TSL 5

Gene PBRM1, Length 517 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-217ENST00000450271 PRG4Q92954 1404 aaPredicted RBP45.73■■■■■ 4.91
PBRM1-217ENST00000450271 CUL7Q14999 1698 aa45.65■■■■■ 4.9
PBRM1-217ENST00000450271 KIAA0586Q9BVV6 1533 aa45.55■■■■■ 4.88
PBRM1-217ENST00000450271 CARMIL1Q5VZK9 1371 aa45.48■■■■■ 4.87
PBRM1-217ENST00000450271 ADCY10Q96PN6 1610 aa45.18■■■■■ 4.82
PBRM1-217ENST00000450271 IQGAP2Q13576 1575 aa45.11■■■■■ 4.81
PBRM1-217ENST00000450271 KIF13AQ9H1H9 1805 aa45.1■■■■■ 4.81
PBRM1-217ENST00000450271 NPM1P06748 294 aaKnown RBP eCLIP45.1■■■■■ 4.81
PBRM1-217ENST00000450271 RAPGEF2Q9Y4G8 1499 aa45.09■■■■■ 4.81
PBRM1-217ENST00000450271 MAPKBP1O60336 1514 aa45.08■■■■■ 4.81
PBRM1-217ENST00000450271 PTPRGP23470 1445 aa45.06■■■■■ 4.8
PBRM1-217ENST00000450271 CARMIL2Q6F5E8 1435 aa45.05■■■■■ 4.8
PBRM1-217ENST00000450271 ABCC10Q5T3U5 1492 aa45.02■■■■■ 4.8
PBRM1-217ENST00000450271 TNIKQ9UKE5 1360 aa45.01■■■■■ 4.8
PBRM1-217ENST00000450271 FAM69CQ0P6D2 419 aa44.93■■■■■ 4.78
PBRM1-217ENST00000450271 DISP1Q96F81 1524 aa44.92■■■■■ 4.78
PBRM1-217ENST00000450271 DIP2BQ9P265 1576 aa44.89■■■■■ 4.78
PBRM1-217ENST00000450271 TTBK1Q5TCY1 1321 aaPredicted RBP44.88■■■■■ 4.78
PBRM1-217ENST00000450271 UGGT2Q9NYU1 1516 aa44.88■■■■■ 4.78
PBRM1-217ENST00000450271 ABCC2Q92887 1545 aa44.8■■■■■ 4.76
PBRM1-217ENST00000450271 UHRF1BP1LA0JNW5 1464 aa44.77■■■■■ 4.76
PBRM1-217ENST00000450271 PRXQ9BXM0 1461 aa44.74■■■■■ 4.75
PBRM1-217ENST00000450271 UACAQ9BZF9 1416 aa44.74■■■■■ 4.75
PBRM1-217ENST00000450271 KIAA0556O60303 1618 aa44.72■■■■■ 4.75
PBRM1-217ENST00000450271 CTTNBP2Q8WZ74 1663 aa44.65■■■■■ 4.74
PBRM1-217ENST00000450271 ASXL2Q76L83 1435 aa44.61■■■■■ 4.73
PBRM1-217ENST00000450271 PLB1Q6P1J6 1458 aa44.58■■■■■ 4.73
PBRM1-217ENST00000450271 KDM5BQ9UGL1 1544 aa44.55■■■■■ 4.72
PBRM1-217ENST00000450271 GOLGA3Q08378 1498 aa44.5■■■■■ 4.71
PBRM1-217ENST00000450271 TSPOAP1O95153 1857 aa44.48■■■■■ 4.71
PBRM1-217ENST00000450271 AEBP2Q6ZN18 517 aaPredicted RBP44.46■■■■■ 4.71
PBRM1-217ENST00000450271 GLI2P10070 1586 aa44.46■■■■■ 4.71
PBRM1-217ENST00000450271 CSRNP3Q8WYN3 585 aa44.41■■■■■ 4.7
PBRM1-217ENST00000450271 ZCCHC11Q5TAX3 1644 aaKnown RBP44.41■■■■■ 4.7
PBRM1-217ENST00000450271 KDM6BO15054 1643 aa44.39■■■■■ 4.7
PBRM1-217ENST00000450271 EPRSP07814 1512 aaKnown RBP44.34■■■■■ 4.69
PBRM1-217ENST00000450271 ABCA8O94911 1581 aa44.31■■■■■ 4.68
PBRM1-217ENST00000450271 PPRC1Q5VV67 1664 aaKnown RBP44.3■■■■■ 4.68
PBRM1-217ENST00000450271 EEA1Q15075 1411 aa44.28■■■■■ 4.68
PBRM1-217ENST00000450271 WDR7Q9Y4E6 1490 aa44.21■■■■■ 4.67
PBRM1-217ENST00000450271 MAP3K4Q9Y6R4 1608 aa44.2■■■■■ 4.67
PBRM1-217ENST00000450271 P3H3Q8IVL6 736 aa44.11■■■■■ 4.65
PBRM1-217ENST00000450271 SAMD9Q5K651 1589 aa44.09■■■■■ 4.65
PBRM1-217ENST00000450271 TEX14Q8IWB6 1497 aa44.06■■■■■ 4.64
PBRM1-217ENST00000450271 COL17A1Q9UMD9 1497 aaPredicted RBP44.02■■■■■ 4.64
PBRM1-217ENST00000450271 FAM9AQ8IZU1 332 aaPredicted RBP44.01■■■■■ 4.64
PBRM1-217ENST00000450271 KCNH8Q96L42 1107 aa43.95■■■■■ 4.63
PBRM1-217ENST00000450271 ATP10BO94823 1461 aa43.95■■■■■ 4.63
PBRM1-217ENST00000450271 CD109Q6YHK3 1445 aa43.91■■■■■ 4.62
PBRM1-217ENST00000450271 KIF21BO75037 1637 aa43.9■■■■■ 4.62
PBRM1-217ENST00000450271 MAGI3Q5TCQ9 1506 aa43.89■■■■■ 4.62
PBRM1-217ENST00000450271 CFAP43Q8NDM7 1665 aa43.89■■■■■ 4.62
PBRM1-217ENST00000450271 KDM4FA0A1W2PPD8 638 aa43.89■■■■■ 4.62
PBRM1-217ENST00000450271 ARID3CA6NKF2 412 aa43.89■■■■■ 4.62
PBRM1-217ENST00000450271 RAPGEF6Q8TEU7 1601 aa43.84■■■■■ 4.61
PBRM1-217ENST00000450271 CHIC1Q5VXU3 224 aa43.83■■■■■ 4.61
PBRM1-217ENST00000450271 RANGAP1P46060 587 aaPredicted RBP43.82■■■■■ 4.61
PBRM1-217ENST00000450271 FHOD3Q2V2M9 1422 aa43.81■■■■■ 4.6
PBRM1-217ENST00000450271 NUP153P49790 1475 aaKnown RBP43.73■■■■■ 4.59
PBRM1-217ENST00000450271 EFCAB5A4FU69 1503 aa43.69■■■■■ 4.59
PBRM1-217ENST00000450271 ABCA9Q8IUA7 1624 aa43.64■■■■■ 4.58
PBRM1-217ENST00000450271 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP43.6■■■■■ 4.57
PBRM1-217ENST00000450271 HNRNPUL2Q1KMD3 747 aaKnown RBP43.6■■■■■ 4.57
PBRM1-217ENST00000450271 ADGRL1O94910 1474 aa43.58■■■■■ 4.57
PBRM1-217ENST00000450271 ARAP3Q8WWN8 1544 aa43.54■■■■■ 4.56
PBRM1-217ENST00000450271 UBTFP17480 764 aaKnown RBP43.52■■■■■ 4.56
PBRM1-217ENST00000450271 EHMT2Q96KQ7 1210 aa43.51■■■■■ 4.56
PBRM1-217ENST00000450271 PHLDB1Q86UU1 1377 aa43.47■■■■■ 4.55
PBRM1-217ENST00000450271 PLEKHD1A6NEE1 506 aa43.43■■■■■ 4.54
PBRM1-217ENST00000450271 NEO1Q92859 1461 aa43.4■■■■■ 4.54
PBRM1-217ENST00000450271 ARHGAP35Q9NRY4 1499 aa43.38■■■■■ 4.53
PBRM1-217ENST00000450271 FMN1Q68DA7 1419 aa43.31■■■■■ 4.52
PBRM1-217ENST00000450271 CDK13Q14004 1512 aaKnown RBP43.3■■■■■ 4.52
PBRM1-217ENST00000450271 RAPGEF3O95398 923 aa43.27■■■■■ 4.52
PBRM1-217ENST00000450271 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.27■■■■■ 4.52
PBRM1-217ENST00000450271 FRMPD1Q5SYB0 1578 aa43.2■■■■■ 4.51
PBRM1-217ENST00000450271 HECW1Q76N89 1606 aa43.19■■■■■ 4.51
PBRM1-217ENST00000450271 TTC37Q6PGP7 1564 aa43.19■■■■■ 4.5
PBRM1-217ENST00000450271 FANCAO15360 1455 aa43.14■■■■■ 4.5
PBRM1-217ENST00000450271 AKNAQ7Z591 1439 aa43.14■■■■■ 4.5
PBRM1-217ENST00000450271 ATP1B4Q9UN42 357 aaPredicted RBP43.12■■■■■ 4.49
PBRM1-217ENST00000450271 CFAP74Q9C0B2 1584 aa43.09■■■■■ 4.49
PBRM1-217ENST00000450271 DENND4BO75064 1496 aaPredicted RBP43.09■■■■■ 4.49
PBRM1-217ENST00000450271 RICTORQ6R327 1708 aa43.02■■■■■ 4.48
PBRM1-217ENST00000450271 PLCH2O75038 1416 aa43.01■■■■■ 4.48
PBRM1-217ENST00000450271 CDK11AQ9UQ88 783 aaPredicted RBP43.01■■■■■ 4.48
PBRM1-217ENST00000450271 ARHGEF40Q8TER5 1519 aa42.95■■■■■ 4.47
PBRM1-217ENST00000450271 TROQ12816 1431 aaPredicted RBP42.94■■■■■ 4.46
PBRM1-217ENST00000450271 LRRIQ1Q96JM4 1722 aa42.92■■■■■ 4.46
PBRM1-217ENST00000450271 ADAMTSL3P82987 1691 aa42.91■■■■■ 4.46
PBRM1-217ENST00000450271 ZMYM4Q5VZL5 1548 aa42.91■■■■■ 4.46
PBRM1-217ENST00000450271 KIF14Q15058 1648 aa42.89■■■■■ 4.46
PBRM1-217ENST00000450271 HECW2Q9P2P5 1572 aa42.89■■■■■ 4.46
PBRM1-217ENST00000450271 CASKIN1Q8WXD9 1431 aa42.88■■■■■ 4.46
PBRM1-217ENST00000450271 PCF11O94913 1555 aaKnown RBP42.86■■■■■ 4.45
PBRM1-217ENST00000450271 SCAPERQ9BY12 1400 aa42.85■■■■■ 4.45
PBRM1-217ENST00000450271 CLIP1P30622 1438 aa42.84■■■■■ 4.45
PBRM1-217ENST00000450271 MYO5CQ9NQX4 1742 aa42.84■■■■■ 4.45
PBRM1-217ENST00000450271 BCORL1Q5H9F3 1711 aa42.83■■■■■ 4.45
PBRM1-217ENST00000450271 POGZQ7Z3K3 1410 aa42.82■■■■■ 4.45
Retrieved 100 of 20,778 RNA–protein pairs in 123.9 ms