RNA–Protein interactions for RNA: ENST00000449853.2

NBPF1-205, Transcript of NBPF member 1, humanhuman

TSL 1 (best)

Gene NBPF1, Length 2,755 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1-205ENST00000449853 SIN3AQ96ST3 1273 aa25.78■■□□□ 1.72
NBPF1-205ENST00000449853 IRX6P78412 446 aaPredicted RBP25.76■■□□□ 1.71
NBPF1-205ENST00000449853 PEG3Q9GZU2 1588 aa25.73■■□□□ 1.71
NBPF1-205ENST00000449853 SETD5Q9C0A6 1442 aa25.64■■□□□ 1.7
NBPF1-205ENST00000449853 HNRNPUQ00839 825 aaKnown RBP eCLIP25.63■■□□□ 1.69
NBPF1-205ENST00000449853 ERICH3Q5RHP9 1530 aa25.62■■□□□ 1.69
NBPF1-205ENST00000449853 PRXQ9BXM0 1461 aa25.61■■□□□ 1.69
NBPF1-205ENST00000449853 TIMELESSQ9UNS1 1208 aa25.6■■□□□ 1.69
NBPF1-205ENST00000449853 TOP2BQ02880 1626 aa25.58■■□□□ 1.69
NBPF1-205ENST00000449853 PPP4R2Q9NY27 417 aa25.55■■□□□ 1.68
NBPF1-205ENST00000449853 ERICH6BQ5W0A0 696 aa25.53■■□□□ 1.68
NBPF1-205ENST00000449853 BICRAQ9NZM4 1560 aa25.52■■□□□ 1.68
NBPF1-205ENST00000449853 NBR1Q14596 966 aa25.52■■□□□ 1.68
NBPF1-205ENST00000449853 ANO8Q9HCE9 1232 aaPredicted RBP25.5■■□□□ 1.67
NBPF1-205ENST00000449853 NOP58Q9Y2X3 529 aaKnown RBP25.49■■□□□ 1.67
NBPF1-205ENST00000449853 PABPN1Q86U42 306 aaKnown RBP eCLIP25.48■■□□□ 1.67
NBPF1-205ENST00000449853 BIVM-ERCC5R4GMW8 1640 aa25.48■■□□□ 1.67
NBPF1-205ENST00000449853 ARHGAP35Q9NRY4 1499 aa25.45■■□□□ 1.67
NBPF1-205ENST00000449853 ATAD2BQ9ULI0 1458 aa25.45■■□□□ 1.66
NBPF1-205ENST00000449853 FAM50AQ14320 339 aaKnown RBP25.44■■□□□ 1.66
NBPF1-205ENST00000449853 B4GALNT3Q6L9W6 998 aa25.43■■□□□ 1.66
NBPF1-205ENST00000449853 PAK3O75914 559 aaPredicted RBP25.42■■□□□ 1.66
NBPF1-205ENST00000449853 PHLDB1Q86UU1 1377 aa25.36■■□□□ 1.65
NBPF1-205ENST00000449853 TONSLQ96HA7 1378 aa25.35■■□□□ 1.65
NBPF1-205ENST00000449853 TIAM1Q13009 1591 aa25.32■■□□□ 1.64
NBPF1-205ENST00000449853 SALL2Q9Y467 1007 aaPredicted RBP25.31■■□□□ 1.64
NBPF1-205ENST00000449853 LRRC9Q6ZRR7 1453 aa25.28■■□□□ 1.64
NBPF1-205ENST00000449853 KIF27Q86VH2 1401 aa25.26■■□□□ 1.63
NBPF1-205ENST00000449853 MAP3K1Q13233 1512 aa25.26■■□□□ 1.63
NBPF1-205ENST00000449853 RTL5Q5HYW3 569 aaPredicted RBP25.25■■□□□ 1.63
NBPF1-205ENST00000449853 CCDC184Q52MB2 194 aa25.22■■□□□ 1.63
NBPF1-205ENST00000449853 CUX1P39880 1505 aa25.2■■□□□ 1.62
NBPF1-205ENST00000449853 IPO9Q96P70 1041 aaKnown RBP25.19■■□□□ 1.62
NBPF1-205ENST00000449853 ANP32AP39687 249 aaKnown RBP25.19■■□□□ 1.62
NBPF1-205ENST00000449853 IL27Q8NEV9 243 aa25.17■■□□□ 1.62
NBPF1-205ENST00000449853 WASHC2AQ641Q2 1341 aa25.17■■□□□ 1.62
NBPF1-205ENST00000449853 FAM9BQ8IZU0 186 aa25.17■■□□□ 1.62
NBPF1-205ENST00000449853 FHAD1B1AJZ9 1412 aa25.15■■□□□ 1.62
NBPF1-205ENST00000449853 ZBTB47Q9UFB7 747 aaPredicted RBP25.15■■□□□ 1.62
NBPF1-205ENST00000449853 ZBED9Q6R2W3 1325 aa25.13■■□□□ 1.61
NBPF1-205ENST00000449853 CCDC136Q96JN2 1154 aa25.12■■□□□ 1.61
NBPF1-205ENST00000449853 RTN4Q9NQC3 1192 aaKnown RBP25.1■■□□□ 1.61
NBPF1-205ENST00000449853 HSPA5P11021 654 aaKnown RBP25.09■■□□□ 1.61
NBPF1-205ENST00000449853 ATP1B4Q9UN42 357 aaPredicted RBP25.08■■□□□ 1.61
NBPF1-205ENST00000449853 MRS2Q9HD23 443 aa25.07■■□□□ 1.6
NBPF1-205ENST00000449853 PRKRIP1Q9H875 184 aaPredicted RBP25.04■■□□□ 1.6
NBPF1-205ENST00000449853 CCDC18Q5T9S5 1454 aa25.03■■□□□ 1.6
NBPF1-205ENST00000449853 CNTLNQ9NXG0 1405 aa25.02■■□□□ 1.6
NBPF1-205ENST00000449853 UACAQ9BZF9 1416 aa25.02■■□□□ 1.6
NBPF1-205ENST00000449853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25■■□□□ 1.59
NBPF1-205ENST00000449853 KDM5BQ9UGL1 1544 aa24.99■■□□□ 1.59
NBPF1-205ENST00000449853 NCOA2Q15596 1464 aa24.97■■□□□ 1.59
NBPF1-205ENST00000449853 EIF4G2P78344 907 aaKnown RBP eCLIP24.97■■□□□ 1.59
NBPF1-205ENST00000449853 P3H3Q8IVL6 736 aa24.97■■□□□ 1.59
NBPF1-205ENST00000449853 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.97■■□□□ 1.59
NBPF1-205ENST00000449853 CFAP43Q8NDM7 1665 aa24.95■■□□□ 1.59
NBPF1-205ENST00000449853 AKNAQ7Z591 1439 aa24.95■■□□□ 1.59
NBPF1-205ENST00000449853 IGF1RP08069 1367 aa24.94■■□□□ 1.58
NBPF1-205ENST00000449853 PCF11O94913 1555 aaKnown RBP24.91■■□□□ 1.58
NBPF1-205ENST00000449853 HFM1A2PYH4 1435 aa24.91■■□□□ 1.58
NBPF1-205ENST00000449853 C11orf95C9JLR9 678 aaPredicted RBP24.91■■□□□ 1.58
NBPF1-205ENST00000449853 SMG6Q86US8 1419 aaKnown RBP24.89■■□□□ 1.58
NBPF1-205ENST00000449853 NEFMP07197 916 aa24.88■■□□□ 1.57
NBPF1-205ENST00000449853 NCAPD3P42695 1498 aa24.88■■□□□ 1.57
NBPF1-205ENST00000449853 PTPRKQ15262 1439 aa24.88■■□□□ 1.57
NBPF1-205ENST00000449853 FGD6Q6ZV73 1430 aa24.87■■□□□ 1.57
NBPF1-205ENST00000449853 AQRO60306 1485 aaKnown RBP eCLIP24.87■■□□□ 1.576e-8■■■■■ 37
NBPF1-205ENST00000449853 NPM2Q86SE8 214 aaKnown RBP24.86■■□□□ 1.57
NBPF1-205ENST00000449853 LAS1LQ9Y4W2 734 aaKnown RBP24.86■■□□□ 1.57
NBPF1-205ENST00000449853 CCDC7Q96M83 1385 aa24.86■■□□□ 1.57
NBPF1-205ENST00000449853 RNF123Q5XPI4 1314 aa24.86■■□□□ 1.57
NBPF1-205ENST00000449853 CARMIL1Q5VZK9 1371 aa24.86■■□□□ 1.57
NBPF1-205ENST00000449853 NUDCQ9Y266 331 aa24.85■■□□□ 1.57
NBPF1-205ENST00000449853 PTPN23Q9H3S7 1636 aa24.84■■□□□ 1.57
NBPF1-205ENST00000449853 USP35Q9P2H5 1018 aa24.84■■□□□ 1.57
NBPF1-205ENST00000449853 CFTRP13569 1480 aa24.83■■□□□ 1.56
NBPF1-205ENST00000449853 NAIPQ13075 1403 aa24.82■■□□□ 1.56
NBPF1-205ENST00000449853 NCOA1Q15788 1441 aa24.82■■□□□ 1.56
NBPF1-205ENST00000449853 HMGXB3Q12766 1538 aa24.81■■□□□ 1.56
NBPF1-205ENST00000449853 UBE2Q2Q8WVN8 375 aa24.81■■□□□ 1.56
NBPF1-205ENST00000449853 WASHC2CQ9Y4E1 1318 aa24.78■■□□□ 1.56
NBPF1-205ENST00000449853 FHOD3Q2V2M9 1422 aa24.78■■□□□ 1.56
NBPF1-205ENST00000449853 FMN1Q68DA7 1419 aa24.76■■□□□ 1.55
NBPF1-205ENST00000449853 FYCO1Q9BQS8 1478 aa24.76■■□□□ 1.55
NBPF1-205ENST00000449853 CASKIN1Q8WXD9 1431 aa24.72■■□□□ 1.55
NBPF1-205ENST00000449853 L3MBTL2Q969R5 705 aa24.72■■□□□ 1.55
NBPF1-205ENST00000449853 SENP3-EIF4A1A0A087X0R7 540 aa24.71■■□□□ 1.55
NBPF1-205ENST00000449853 PPM1GO15355 546 aaPredicted RBP24.7■■□□□ 1.54
NBPF1-205ENST00000449853 CNGB1Q14028 1251 aaPredicted RBP24.7■■□□□ 1.54
NBPF1-205ENST00000449853 KIF7Q2M1P5 1343 aa24.7■■□□□ 1.54
NBPF1-205ENST00000449853 BRPF3Q9ULD4 1205 aa24.69■■□□□ 1.54
NBPF1-205ENST00000449853 FGD5Q6ZNL6 1462 aa24.68■■□□□ 1.54
NBPF1-205ENST00000449853 PDE4AP27815 886 aa24.68■■□□□ 1.54
NBPF1-205ENST00000449853 TCERG1O14776 1098 aaKnown RBP24.68■■□□□ 1.54
NBPF1-205ENST00000449853 PRDM2Q13029 1718 aa24.68■■□□□ 1.54
NBPF1-205ENST00000449853 MTUS2Q5JR59 1369 aa24.67■■□□□ 1.54
NBPF1-205ENST00000449853 RRP7BPQ9NSQ0 103 aa24.66■■□□□ 1.54
NBPF1-205ENST00000449853 DENND4BO75064 1496 aaPredicted RBP24.64■■□□□ 1.53
NBPF1-205ENST00000449853 BACH2Q9BYV9 841 aa24.63■■□□□ 1.53
NBPF1-205ENST00000449853 EIF5BO60841 1220 aaKnown RBP24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms