RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 ERCC6L2Q5T890 1561 aa17.83■□□□□ 0.44
SMPD4-211ENST00000449159 NUP160Q12769 1436 aa17.81■□□□□ 0.44
SMPD4-211ENST00000449159 EEA1Q15075 1411 aa17.79■□□□□ 0.44
SMPD4-211ENST00000449159 FAM9AQ8IZU1 332 aaPredicted RBP17.78■□□□□ 0.44
SMPD4-211ENST00000449159 RAPGEF2Q9Y4G8 1499 aa17.76■□□□□ 0.43
SMPD4-211ENST00000449159 PRXQ9BXM0 1461 aa17.75■□□□□ 0.43
SMPD4-211ENST00000449159 CSRNP3Q8WYN3 585 aa17.74■□□□□ 0.43
SMPD4-211ENST00000449159 KIF13AQ9H1H9 1805 aa17.74■□□□□ 0.43
SMPD4-211ENST00000449159 CTTNBP2Q8WZ74 1663 aa17.67■□□□□ 0.42
SMPD4-211ENST00000449159 KIF21BO75037 1637 aa17.67■□□□□ 0.42
SMPD4-211ENST00000449159 KIAA0586Q9BVV6 1533 aa17.66■□□□□ 0.42
SMPD4-211ENST00000449159 IQGAP2Q13576 1575 aa17.64■□□□□ 0.41
SMPD4-211ENST00000449159 AEBP2Q6ZN18 517 aaPredicted RBP17.6■□□□□ 0.41
SMPD4-211ENST00000449159 PRG4Q92954 1404 aaPredicted RBP17.58■□□□□ 0.41
SMPD4-211ENST00000449159 JPH4Q96JJ6 628 aa17.57■□□□□ 0.4
SMPD4-211ENST00000449159 EHMT2Q96KQ7 1210 aa17.57■□□□□ 0.4
SMPD4-211ENST00000449159 ADCY10Q96PN6 1610 aa17.55■□□□□ 0.4
SMPD4-211ENST00000449159 MAPKBP1O60336 1514 aa17.55■□□□□ 0.4
SMPD4-211ENST00000449159 GOLGA3Q08378 1498 aa17.54■□□□□ 0.4
SMPD4-211ENST00000449159 DIP2BQ9P265 1576 aa17.53■□□□□ 0.4
SMPD4-211ENST00000449159 UGGT2Q9NYU1 1516 aa17.52■□□□□ 0.4
SMPD4-211ENST00000449159 DISP1Q96F81 1524 aa17.5■□□□□ 0.39
SMPD4-211ENST00000449159 KIAA0556O60303 1618 aa17.48■□□□□ 0.39
SMPD4-211ENST00000449159 ABCC10Q5T3U5 1492 aa17.47■□□□□ 0.39
SMPD4-211ENST00000449159 UBTFP17480 764 aaKnown RBP17.45■□□□□ 0.38
SMPD4-211ENST00000449159 CARMIL2Q6F5E8 1435 aa17.44■□□□□ 0.38
SMPD4-211ENST00000449159 TSPOAP1O95153 1857 aa17.44■□□□□ 0.38
SMPD4-211ENST00000449159 KDM6BO15054 1643 aa17.43■□□□□ 0.38
SMPD4-211ENST00000449159 SAMD9Q5K651 1589 aa17.43■□□□□ 0.38
SMPD4-211ENST00000449159 RANGAP1P46060 587 aaPredicted RBP17.4■□□□□ 0.38
SMPD4-211ENST00000449159 TNIKQ9UKE5 1360 aa17.39■□□□□ 0.37
SMPD4-211ENST00000449159 TTBK1Q5TCY1 1321 aaPredicted RBP17.37■□□□□ 0.37
SMPD4-211ENST00000449159 PTPRGP23470 1445 aa17.36■□□□□ 0.37
SMPD4-211ENST00000449159 NPM1P06748 294 aaKnown RBP eCLIP17.35■□□□□ 0.37
SMPD4-211ENST00000449159 EFCAB5A4FU69 1503 aa17.35■□□□□ 0.37
SMPD4-211ENST00000449159 P3H3Q8IVL6 736 aa17.34■□□□□ 0.37
SMPD4-211ENST00000449159 FAM69CQ0P6D2 419 aa17.33■□□□□ 0.36
SMPD4-211ENST00000449159 LOC105371045A0A1W2PR82 267 aa17.32■□□□□ 0.36
SMPD4-211ENST00000449159 FHOD3Q2V2M9 1422 aa17.31■□□□□ 0.36
SMPD4-211ENST00000449159 ARHGAP35Q9NRY4 1499 aa17.31■□□□□ 0.36
SMPD4-211ENST00000449159 PPRC1Q5VV67 1664 aaKnown RBP17.3■□□□□ 0.36
SMPD4-211ENST00000449159 ABCC2Q92887 1545 aa17.29■□□□□ 0.36
SMPD4-211ENST00000449159 PLB1Q6P1J6 1458 aa17.27■□□□□ 0.36
SMPD4-211ENST00000449159 ABCA8O94911 1581 aa17.26■□□□□ 0.35
SMPD4-211ENST00000449159 GLI2P10070 1586 aa17.25■□□□□ 0.35
SMPD4-211ENST00000449159 UACAQ9BZF9 1416 aa17.25■□□□□ 0.35
SMPD4-211ENST00000449159 CLIP1P30622 1438 aa17.24■□□□□ 0.35
SMPD4-211ENST00000449159 UHRF1BP1LA0JNW5 1464 aa17.24■□□□□ 0.35
SMPD4-211ENST00000449159 CEP162Q5TB80 1403 aa17.22■□□□□ 0.35
SMPD4-211ENST00000449159 MAP3K4Q9Y6R4 1608 aa17.22■□□□□ 0.35
SMPD4-211ENST00000449159 ZCCHC11Q5TAX3 1644 aaKnown RBP17.21■□□□□ 0.35
SMPD4-211ENST00000449159 RAPGEF6Q8TEU7 1601 aa17.21■□□□□ 0.35
SMPD4-211ENST00000449159 ASXL2Q76L83 1435 aa17.2■□□□□ 0.34
SMPD4-211ENST00000449159 KDM5BQ9UGL1 1544 aa17.16■□□□□ 0.34
SMPD4-211ENST00000449159 FMN1Q68DA7 1419 aa17.14■□□□□ 0.33
SMPD4-211ENST00000449159 NUP153P49790 1475 aaKnown RBP17.14■□□□□ 0.33
SMPD4-211ENST00000449159 PCF11O94913 1555 aaKnown RBP17.14■□□□□ 0.33
SMPD4-211ENST00000449159 ARID3CA6NKF2 412 aa17.12■□□□□ 0.33
SMPD4-211ENST00000449159 LRRIQ1Q96JM4 1722 aa17.12■□□□□ 0.33
SMPD4-211ENST00000449159 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
SMPD4-211ENST00000449159 EPRSP07814 1512 aaKnown RBP17.11■□□□□ 0.33
SMPD4-211ENST00000449159 HECW1Q76N89 1606 aa17.11■□□□□ 0.33
SMPD4-211ENST00000449159 KDM4FA0A1W2PPD8 638 aa17.09■□□□□ 0.33
SMPD4-211ENST00000449159 ATP10BO94823 1461 aa17.09■□□□□ 0.33
SMPD4-211ENST00000449159 ADGRL1O94910 1474 aa17.09■□□□□ 0.33
SMPD4-211ENST00000449159 CFAP43Q8NDM7 1665 aa17.08■□□□□ 0.32
SMPD4-211ENST00000449159 CDK13Q14004 1512 aaKnown RBP17.07■□□□□ 0.32
SMPD4-211ENST00000449159 WDR7Q9Y4E6 1490 aa17.05■□□□□ 0.32
SMPD4-211ENST00000449159 CASKIN1Q8WXD9 1431 aa17.05■□□□□ 0.32
SMPD4-211ENST00000449159 FYCO1Q9BQS8 1478 aa17.04■□□□□ 0.32
SMPD4-211ENST00000449159 ATP1B4Q9UN42 357 aaPredicted RBP17.03■□□□□ 0.32
SMPD4-211ENST00000449159 COL17A1Q9UMD9 1497 aaPredicted RBP17■□□□□ 0.31
SMPD4-211ENST00000449159 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.99■□□□□ 0.31
SMPD4-211ENST00000449159 HNRNPUL2Q1KMD3 747 aaKnown RBP16.99■□□□□ 0.31
SMPD4-211ENST00000449159 VPS8Q8N3P4 1428 aa16.98■□□□□ 0.31
SMPD4-211ENST00000449159 HECW2Q9P2P5 1572 aa16.98■□□□□ 0.31
SMPD4-211ENST00000449159 CCDC18Q5T9S5 1454 aa16.96■□□□□ 0.31
SMPD4-211ENST00000449159 MAGI3Q5TCQ9 1506 aa16.95■□□□□ 0.3
SMPD4-211ENST00000449159 KCNH8Q96L42 1107 aa16.93■□□□□ 0.3
SMPD4-211ENST00000449159 KIF14Q15058 1648 aa16.91■□□□□ 0.3
SMPD4-211ENST00000449159 ABCA9Q8IUA7 1624 aa16.91■□□□□ 0.3
SMPD4-211ENST00000449159 PLEKHD1A6NEE1 506 aa16.9■□□□□ 0.3
SMPD4-211ENST00000449159 TTC37Q6PGP7 1564 aa16.89■□□□□ 0.29
SMPD4-211ENST00000449159 CD109Q6YHK3 1445 aa16.88■□□□□ 0.29
SMPD4-211ENST00000449159 TROQ12816 1431 aaPredicted RBP16.87■□□□□ 0.29
SMPD4-211ENST00000449159 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.87■□□□□ 0.29
SMPD4-211ENST00000449159 TIAM1Q13009 1591 aa16.87■□□□□ 0.29
SMPD4-211ENST00000449159 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
SMPD4-211ENST00000449159 ARAP3Q8WWN8 1544 aa16.82■□□□□ 0.28
SMPD4-211ENST00000449159 EHBP1L1Q8N3D4 1523 aa16.81■□□□□ 0.28
SMPD4-211ENST00000449159 MYO5CQ9NQX4 1742 aa16.81■□□□□ 0.28
SMPD4-211ENST00000449159 MAP3K1Q13233 1512 aa16.8■□□□□ 0.28
SMPD4-211ENST00000449159 MTUS2Q5JR59 1369 aa16.79■□□□□ 0.28
SMPD4-211ENST00000449159 FRMPD1Q5SYB0 1578 aa16.77■□□□□ 0.28
SMPD4-211ENST00000449159 CDC42BPAQ5VT25 1732 aa16.77■□□□□ 0.28
SMPD4-211ENST00000449159 ILDR1Q86SU0 546 aaPredicted RBP16.77■□□□□ 0.28
SMPD4-211ENST00000449159 LRRC9Q6ZRR7 1453 aa16.77■□□□□ 0.28
SMPD4-211ENST00000449159 ADAMTSL3P82987 1691 aa16.76■□□□□ 0.27
SMPD4-211ENST00000449159 CDC42BPBQ9Y5S2 1711 aa16.76■□□□□ 0.27
SMPD4-211ENST00000449159 PREX2Q70Z35 1606 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms