RNA–Protein interactions for RNA: ENST00000448874.5

PTMA-208, Transcript of prothymosin alpha, humanhuman

TSL 2

Gene PTMA, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTMA-208ENST00000448874 JPH4Q96JJ6 628 aa29.08■■■□□ 2.25
PTMA-208ENST00000448874 CUL7Q14999 1698 aa29.05■■■□□ 2.24
PTMA-208ENST00000448874 IGF1RP08069 1367 aa29.05■■■□□ 2.24
PTMA-208ENST00000448874 KIAA0586Q9BVV6 1533 aa28.95■■■□□ 2.23
PTMA-208ENST00000448874 CARMIL1Q5VZK9 1371 aa28.88■■■□□ 2.21
PTMA-208ENST00000448874 KIF13AQ9H1H9 1805 aa28.84■■■□□ 2.21
PTMA-208ENST00000448874 ADCY10Q96PN6 1610 aa28.8■■■□□ 2.2
PTMA-208ENST00000448874 NPM1P06748 294 aaKnown RBP eCLIP28.74■■■□□ 2.193e-14■□□□□ 9
PTMA-208ENST00000448874 MAPKBP1O60336 1514 aa28.74■■■□□ 2.19
PTMA-208ENST00000448874 IQGAP2Q13576 1575 aa28.72■■■□□ 2.19
PTMA-208ENST00000448874 ABCC10Q5T3U5 1492 aa28.7■■■□□ 2.18
PTMA-208ENST00000448874 CARMIL2Q6F5E8 1435 aa28.67■■■□□ 2.18
PTMA-208ENST00000448874 PTPRGP23470 1445 aa28.66■■■□□ 2.18
PTMA-208ENST00000448874 DIP2BQ9P265 1576 aa28.66■■■□□ 2.18
PTMA-208ENST00000448874 FAM69CQ0P6D2 419 aa28.65■■■□□ 2.18
PTMA-208ENST00000448874 RAPGEF2Q9Y4G8 1499 aa28.64■■■□□ 2.17
PTMA-208ENST00000448874 TNIKQ9UKE5 1360 aa28.62■■■□□ 2.17
PTMA-208ENST00000448874 TTBK1Q5TCY1 1321 aaPredicted RBP28.61■■■□□ 2.17
PTMA-208ENST00000448874 DISP1Q96F81 1524 aa28.57■■■□□ 2.16
PTMA-208ENST00000448874 UGGT2Q9NYU1 1516 aa28.53■■■□□ 2.16
PTMA-208ENST00000448874 ABCC2Q92887 1545 aa28.52■■■□□ 2.16
PTMA-208ENST00000448874 KIAA0556O60303 1618 aa28.47■■■□□ 2.15
PTMA-208ENST00000448874 UHRF1BP1LA0JNW5 1464 aa28.46■■■□□ 2.15
PTMA-208ENST00000448874 TSPOAP1O95153 1857 aa28.46■■■□□ 2.15
PTMA-208ENST00000448874 UACAQ9BZF9 1416 aa28.46■■■□□ 2.15
PTMA-208ENST00000448874 CTTNBP2Q8WZ74 1663 aa28.45■■■□□ 2.15
PTMA-208ENST00000448874 ASXL2Q76L83 1435 aa28.42■■■□□ 2.14
PTMA-208ENST00000448874 KDM6BO15054 1643 aa28.39■■■□□ 2.13
PTMA-208ENST00000448874 PLB1Q6P1J6 1458 aa28.39■■■□□ 2.13
PTMA-208ENST00000448874 PRXQ9BXM0 1461 aa28.36■■■□□ 2.13
PTMA-208ENST00000448874 KDM5BQ9UGL1 1544 aa28.34■■■□□ 2.13
PTMA-208ENST00000448874 GLI2P10070 1586 aa28.33■■■□□ 2.13
PTMA-208ENST00000448874 ZCCHC11Q5TAX3 1644 aaKnown RBP28.32■■■□□ 2.12
PTMA-208ENST00000448874 GOLGA3Q08378 1498 aa28.29■■■□□ 2.12
PTMA-208ENST00000448874 PPRC1Q5VV67 1664 aaKnown RBP28.28■■■□□ 2.12
PTMA-208ENST00000448874 EPRSP07814 1512 aaKnown RBP28.25■■■□□ 2.11
PTMA-208ENST00000448874 MAP3K4Q9Y6R4 1608 aa28.2■■■□□ 2.1
PTMA-208ENST00000448874 ABCA8O94911 1581 aa28.19■■■□□ 2.1
PTMA-208ENST00000448874 WDR7Q9Y4E6 1490 aa28.16■■■□□ 2.1
PTMA-208ENST00000448874 CSRNP3Q8WYN3 585 aa28.13■■■□□ 2.09
PTMA-208ENST00000448874 TEX14Q8IWB6 1497 aa28.1■■■□□ 2.09
PTMA-208ENST00000448874 EEA1Q15075 1411 aa28.05■■■□□ 2.08
PTMA-208ENST00000448874 COL17A1Q9UMD9 1497 aaPredicted RBP28.05■■■□□ 2.08
PTMA-208ENST00000448874 SAMD9Q5K651 1589 aa28.03■■■□□ 2.08
PTMA-208ENST00000448874 P3H3Q8IVL6 736 aa28.03■■■□□ 2.08
PTMA-208ENST00000448874 KDM4FA0A1W2PPD8 638 aa28.02■■■□□ 2.08
PTMA-208ENST00000448874 CFAP43Q8NDM7 1665 aa28■■■□□ 2.07
PTMA-208ENST00000448874 FAM9AQ8IZU1 332 aaPredicted RBP27.97■■■□□ 2.07
PTMA-208ENST00000448874 KCNH8Q96L42 1107 aa27.97■■■□□ 2.07
PTMA-208ENST00000448874 CD109Q6YHK3 1445 aa27.96■■■□□ 2.07
PTMA-208ENST00000448874 MAGI3Q5TCQ9 1506 aa27.95■■■□□ 2.06
PTMA-208ENST00000448874 ARID3CA6NKF2 412 aa27.94■■■□□ 2.06
PTMA-208ENST00000448874 ATP10BO94823 1461 aa27.93■■■□□ 2.06
PTMA-208ENST00000448874 RAPGEF6Q8TEU7 1601 aa27.91■■■□□ 2.06
PTMA-208ENST00000448874 KIF21BO75037 1637 aa27.86■■■□□ 2.05
PTMA-208ENST00000448874 RANGAP1P46060 587 aaPredicted RBP27.86■■■□□ 2.05
PTMA-208ENST00000448874 ADGRL1O94910 1474 aa27.86■■■□□ 2.05
PTMA-208ENST00000448874 FHOD3Q2V2M9 1422 aa27.84■■■□□ 2.05
PTMA-208ENST00000448874 ABCA9Q8IUA7 1624 aa27.8■■■□□ 2.04
PTMA-208ENST00000448874 NUP153P49790 1475 aaKnown RBP27.79■■■□□ 2.04
PTMA-208ENST00000448874 EFCAB5A4FU69 1503 aa27.77■■■□□ 2.04
PTMA-208ENST00000448874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.75■■■□□ 2.03
PTMA-208ENST00000448874 HNRNPUL2Q1KMD3 747 aaKnown RBP27.75■■■□□ 2.03
PTMA-208ENST00000448874 ARAP3Q8WWN8 1544 aa27.72■■■□□ 2.03
PTMA-208ENST00000448874 CHIC1Q5VXU3 224 aa27.67■■■□□ 2.02
PTMA-208ENST00000448874 PHLDB1Q86UU1 1377 aa27.64■■■□□ 2.02
PTMA-208ENST00000448874 EHMT2Q96KQ7 1210 aa27.64■■■□□ 2.02
PTMA-208ENST00000448874 NEO1Q92859 1461 aa27.63■■■□□ 2.01
PTMA-208ENST00000448874 UBTFP17480 764 aaKnown RBP27.6■■■□□ 2.01
PTMA-208ENST00000448874 PLEKHD1A6NEE1 506 aa27.59■■■□□ 2.01
PTMA-208ENST00000448874 CDK13Q14004 1512 aaKnown RBP27.56■■■□□ 2
PTMA-208ENST00000448874 RAPGEF3O95398 923 aa27.54■■■□□ 2
PTMA-208ENST00000448874 FRMPD1Q5SYB0 1578 aa27.54■■■□□ 2
PTMA-208ENST00000448874 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.53■■■□□ 25e-9■■■■□ 20.9
PTMA-208ENST00000448874 TTC37Q6PGP7 1564 aa27.52■■■□□ 2
PTMA-208ENST00000448874 ARHGAP35Q9NRY4 1499 aa27.51■■■□□ 2
PTMA-208ENST00000448874 FMN1Q68DA7 1419 aa27.49■■□□□ 1.99
PTMA-208ENST00000448874 HECW1Q76N89 1606 aa27.49■■□□□ 1.99
PTMA-208ENST00000448874 CFAP74Q9C0B2 1584 aa27.48■■□□□ 1.99
PTMA-208ENST00000448874 HECW2Q9P2P5 1572 aa27.47■■□□□ 1.99
PTMA-208ENST00000448874 FANCAO15360 1455 aa27.46■■□□□ 1.99
PTMA-208ENST00000448874 AKNAQ7Z591 1439 aa27.44■■□□□ 1.98
PTMA-208ENST00000448874 RICTORQ6R327 1708 aa27.44■■□□□ 1.98
PTMA-208ENST00000448874 DENND4BO75064 1496 aaPredicted RBP27.43■■□□□ 1.98
PTMA-208ENST00000448874 ATP1B4Q9UN42 357 aaPredicted RBP27.42■■□□□ 1.98
PTMA-208ENST00000448874 ARHGEF40Q8TER5 1519 aa27.4■■□□□ 1.98
PTMA-208ENST00000448874 ADAMTSL3P82987 1691 aa27.39■■□□□ 1.97
PTMA-208ENST00000448874 BCORL1Q5H9F3 1711 aa27.36■■□□□ 1.97
PTMA-208ENST00000448874 ZMYM4Q5VZL5 1548 aa27.33■■□□□ 1.97
PTMA-208ENST00000448874 PLCH2O75038 1416 aa27.33■■□□□ 1.96
PTMA-208ENST00000448874 ARID4BQ4LE39 1312 aaPredicted RBP27.32■■□□□ 1.96
PTMA-208ENST00000448874 LRRIQ1Q96JM4 1722 aa27.32■■□□□ 1.96
PTMA-208ENST00000448874 MYO5CQ9NQX4 1742 aa27.32■■□□□ 1.96
PTMA-208ENST00000448874 PTPRMP28827 1452 aa27.32■■□□□ 1.96
PTMA-208ENST00000448874 KIF14Q15058 1648 aa27.31■■□□□ 1.96
PTMA-208ENST00000448874 CDK11AQ9UQ88 783 aaPredicted RBP27.31■■□□□ 1.96
PTMA-208ENST00000448874 MADDQ8WXG6 1647 aa27.29■■□□□ 1.96
PTMA-208ENST00000448874 ZFYVE16Q7Z3T8 1539 aa27.27■■□□□ 1.96
PTMA-208ENST00000448874 TROQ12816 1431 aaPredicted RBP27.27■■□□□ 1.96
PTMA-208ENST00000448874 POGZQ7Z3K3 1410 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms