RNA–Protein interactions for RNA: ENST00000447079.4

CDK12-202, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDK12, Length 8,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-202ENST00000447079 EIF4G1Q04637 1599 aaKnown RBP9.44□□□□□ -0.9
CDK12-202ENST00000447079 CCDC88BA6NC98 1476 aa9.44□□□□□ -0.9
CDK12-202ENST00000447079 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.44□□□□□ -0.96e-7■■□□□ 12.1
CDK12-202ENST00000447079 CUX2O14529 1486 aa9.44□□□□□ -0.9
CDK12-202ENST00000447079 ABCC8Q09428 1581 aa9.44□□□□□ -0.9
CDK12-202ENST00000447079 CDCA8Q53HL2 280 aa9.44□□□□□ -0.9
CDK12-202ENST00000447079 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
CDK12-202ENST00000447079 CARMIL2Q6F5E8 1435 aa9.42□□□□□ -0.9
CDK12-202ENST00000447079 WDR43Q15061 677 aaKnown RBP eCLIP9.41□□□□□ -0.9
CDK12-202ENST00000447079 UPF2Q9HAU5 1272 aaKnown RBP9.41□□□□□ -0.9
CDK12-202ENST00000447079 TMC1Q8TDI8 760 aa9.41□□□□□ -0.9
CDK12-202ENST00000447079 CFDP1Q9UEE9 299 aaPredicted RBP9.41□□□□□ -0.9
CDK12-202ENST00000447079 CARMIL1Q5VZK9 1371 aa9.4□□□□□ -0.9
CDK12-202ENST00000447079 EIF4G2P78344 907 aaKnown RBP eCLIP9.4□□□□□ -0.9
CDK12-202ENST00000447079 FMN1Q68DA7 1419 aa9.39□□□□□ -0.91
CDK12-202ENST00000447079 KANK1Q14678 1352 aa9.38□□□□□ -0.91
CDK12-202ENST00000447079 ARHGAP35Q9NRY4 1499 aa9.38□□□□□ -0.91
CDK12-202ENST00000447079 CCNB3Q8WWL7 1395 aa9.38□□□□□ -0.91
CDK12-202ENST00000447079 ANP32BQ92688 251 aaKnown RBP9.38□□□□□ -0.91
CDK12-202ENST00000447079 ANP32EQ9BTT0 268 aa9.38□□□□□ -0.91
CDK12-202ENST00000447079 PPP1R15AO75807 674 aaPredicted RBP9.37□□□□□ -0.91
CDK12-202ENST00000447079 HNRNPUQ00839 825 aaKnown RBP eCLIP9.35□□□□□ -0.91
CDK12-202ENST00000447079 FKBP8Q14318 412 aa9.35□□□□□ -0.91
CDK12-202ENST00000447079 KCNH8Q96L42 1107 aa9.35□□□□□ -0.91
CDK12-202ENST00000447079 SOGA1O94964 1423 aa9.34□□□□□ -0.91
CDK12-202ENST00000447079 VPS8Q8N3P4 1428 aa9.34□□□□□ -0.91
CDK12-202ENST00000447079 DDX10Q13206 875 aaKnown RBP9.33□□□□□ -0.92
CDK12-202ENST00000447079 RRP7BPQ9NSQ0 103 aa9.33□□□□□ -0.92
CDK12-202ENST00000447079 KDM2AQ9Y2K7 1162 aa9.33□□□□□ -0.92
CDK12-202ENST00000447079 MYH16Q9H6N6 1097 aa9.32□□□□□ -0.92
CDK12-202ENST00000447079 CFAP53Q96M91 514 aa9.32□□□□□ -0.92
CDK12-202ENST00000447079 TIMELESSQ9UNS1 1208 aa9.31□□□□□ -0.92
CDK12-202ENST00000447079 HSP90AA1P07900 732 aaKnown RBP9.31□□□□□ -0.92
CDK12-202ENST00000447079 HDGFP51858 240 aaKnown RBP9.31□□□□□ -0.92
CDK12-202ENST00000447079 FAM9BQ8IZU0 186 aa9.31□□□□□ -0.92
CDK12-202ENST00000447079 ATAD2BQ9ULI0 1458 aa9.3□□□□□ -0.92
CDK12-202ENST00000447079 MRS2Q9HD23 443 aa9.3□□□□□ -0.92
CDK12-202ENST00000447079 NPM2Q86SE8 214 aaKnown RBP9.3□□□□□ -0.92
CDK12-202ENST00000447079 CADPSQ9ULU8 1353 aa9.3□□□□□ -0.92
CDK12-202ENST00000447079 NBR1Q14596 966 aa9.29□□□□□ -0.92
CDK12-202ENST00000447079 CCDC18Q5T9S5 1454 aa9.29□□□□□ -0.92
CDK12-202ENST00000447079 RAPGEF2Q9Y4G8 1499 aa9.29□□□□□ -0.92
CDK12-202ENST00000447079 ARID4BQ4LE39 1312 aaPredicted RBP9.29□□□□□ -0.92
CDK12-202ENST00000447079 PLPPR3Q6T4P5 718 aa9.28□□□□□ -0.92
CDK12-202ENST00000447079 BCL11AQ9H165 835 aa9.28□□□□□ -0.92
CDK12-202ENST00000447079 KNSTRNQ9Y448 316 aa9.28□□□□□ -0.92
CDK12-202ENST00000447079 PNNQ9H307 717 aaKnown RBP9.27□□□□□ -0.93
CDK12-202ENST00000447079 CCDC136Q96JN2 1154 aa9.25□□□□□ -0.93
CDK12-202ENST00000447079 C14orf37Q86TY3 774 aa9.25□□□□□ -0.93
CDK12-202ENST00000447079 SETD5Q9C0A6 1442 aa9.25□□□□□ -0.93
CDK12-202ENST00000447079 PRDM2Q13029 1718 aa9.24□□□□□ -0.93
CDK12-202ENST00000447079 CHMP4BQ9H444 224 aaKnown RBP9.24□□□□□ -0.93
CDK12-202ENST00000447079 CARD11Q9BXL7 1154 aa9.24□□□□□ -0.93
CDK12-202ENST00000447079 FANCD2Q9BXW9 1451 aa9.24□□□□□ -0.93
CDK12-202ENST00000447079 RSPH4AQ5TD94 716 aa9.23□□□□□ -0.93
CDK12-202ENST00000447079 NUDCQ9Y266 331 aa9.22□□□□□ -0.93
CDK12-202ENST00000447079 ANKRD30AQ9BXX3 1397 aa9.21□□□□□ -0.94
CDK12-202ENST00000447079 TNNT2P45379 298 aaPredicted RBP9.2□□□□□ -0.94
CDK12-202ENST00000447079 POGKQ9P215 609 aa9.2□□□□□ -0.94
CDK12-202ENST00000447079 CUX1P39880 1505 aa9.2□□□□□ -0.94
CDK12-202ENST00000447079 MS4A1P11836 297 aa9.2□□□□□ -0.94
CDK12-202ENST00000447079 EIF3AQ14152 1382 aaKnown RBP9.19□□□□□ -0.94
CDK12-202ENST00000447079 RGL3Q3MIN7 710 aa9.19□□□□□ -0.94
CDK12-202ENST00000447079 TMF1P82094 1093 aa9.19□□□□□ -0.94
CDK12-202ENST00000447079 ERICH6BQ5W0A0 696 aa9.18□□□□□ -0.94
CDK12-202ENST00000447079 MAPK8IP3Q9UPT6 1336 aa9.18□□□□□ -0.94
CDK12-202ENST00000447079 DDRGK1Q96HY6 314 aa9.18□□□□□ -0.94
CDK12-202ENST00000447079 HAP1P54257 671 aaPredicted RBP9.17□□□□□ -0.94
CDK12-202ENST00000447079 CASC1Q6TDU7 716 aa9.17□□□□□ -0.94
CDK12-202ENST00000447079 BECN1Q14457 450 aa9.17□□□□□ -0.94
CDK12-202ENST00000447079 EFCAB2Q5VUJ9 269 aa9.17□□□□□ -0.94
CDK12-202ENST00000447079 KIF21BO75037 1637 aa9.17□□□□□ -0.94
CDK12-202ENST00000447079 HMGXB3Q12766 1538 aa9.16□□□□□ -0.94
CDK12-202ENST00000447079 SALL2Q9Y467 1007 aaPredicted RBP9.15□□□□□ -0.94
CDK12-202ENST00000447079 TDRD9Q8NDG6 1382 aaKnown RBP9.14□□□□□ -0.95
CDK12-202ENST00000447079 GAPVD1Q14C86 1478 aa9.14□□□□□ -0.95
CDK12-202ENST00000447079 FTSJ3Q8IY81 847 aaKnown RBP9.14□□□□□ -0.95
CDK12-202ENST00000447079 UNC13AQ9UPW8 1703 aa9.14□□□□□ -0.95
CDK12-202ENST00000447079 UACAQ9BZF9 1416 aa9.13□□□□□ -0.95
CDK12-202ENST00000447079 NCAPD3P42695 1498 aa9.13□□□□□ -0.95
CDK12-202ENST00000447079 ERICH3Q5RHP9 1530 aa9.13□□□□□ -0.95
CDK12-202ENST00000447079 TRIM44Q96DX7 344 aaPredicted RBP9.12□□□□□ -0.95
CDK12-202ENST00000447079 MIER1Q8N108 512 aa9.12□□□□□ -0.95
CDK12-202ENST00000447079 FGD5Q6ZNL6 1462 aa9.12□□□□□ -0.95
CDK12-202ENST00000447079 PPM1GO15355 546 aaPredicted RBP9.11□□□□□ -0.95
CDK12-202ENST00000447079 CFAP44Q96MT7 982 aa9.11□□□□□ -0.95
CDK12-202ENST00000447079 DCAF11Q8TEB1 546 aa9.11□□□□□ -0.95
CDK12-202ENST00000447079 CHMP4AQ9BY43 222 aa9.1□□□□□ -0.95
CDK12-202ENST00000447079 ZBTB7CA1YPR0 619 aa9.1□□□□□ -0.95
CDK12-202ENST00000447079 ROCK2O75116 1388 aaKnown RBP9.09□□□□□ -0.95
CDK12-202ENST00000447079 CC2D2AQ9P2K1 1620 aa9.09□□□□□ -0.95
CDK12-202ENST00000447079 KTN1Q86UP2 1357 aaKnown RBP9.09□□□□□ -0.95
CDK12-202ENST00000447079 GOLGA6L22H0YM25 854 aa9.09□□□□□ -0.95
CDK12-202ENST00000447079 CCER2I3L3R5 266 aa9.09□□□□□ -0.95
CDK12-202ENST00000447079 CALD1Q05682 793 aaKnown RBP9.09□□□□□ -0.95
CDK12-202ENST00000447079 EFCAB5A4FU69 1503 aa9.08□□□□□ -0.96
CDK12-202ENST00000447079 NUP155O75694 1391 aa9.08□□□□□ -0.96
CDK12-202ENST00000447079 FHOD3Q2V2M9 1422 aa9.08□□□□□ -0.96
CDK12-202ENST00000447079 NCLP19338 710 aaKnown RBP9.08□□□□□ -0.96
CDK12-202ENST00000447079 TOP2BQ02880 1626 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms