RNA–Protein interactions for RNA: ENST00000446851.6

LIN54-203, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-203ENST00000446851 EEA1Q15075 1411 aa16.27■□□□□ 0.19
LIN54-203ENST00000446851 MAGI1Q96QZ7 1491 aaPredicted RBP16.26■□□□□ 0.19
LIN54-203ENST00000446851 GRIN2AQ12879 1464 aa16.22■□□□□ 0.19
LIN54-203ENST00000446851 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
LIN54-203ENST00000446851 PRG4Q92954 1404 aaPredicted RBP16.18■□□□□ 0.18
LIN54-203ENST00000446851 ERICH3Q5RHP9 1530 aa16.17■□□□□ 0.18
LIN54-203ENST00000446851 GOLGA3Q08378 1498 aa16.17■□□□□ 0.18
LIN54-203ENST00000446851 ABCA5Q8WWZ7 1642 aa16.14■□□□□ 0.17
LIN54-203ENST00000446851 CARMIL2Q6F5E8 1435 aa16.13■□□□□ 0.17
LIN54-203ENST00000446851 PBRM1Q86U86 1689 aa16.11■□□□□ 0.17
LIN54-203ENST00000446851 PTPRGP23470 1445 aa16.1■□□□□ 0.17
LIN54-203ENST00000446851 ADAMTS12P58397 1594 aa16.08■□□□□ 0.17
LIN54-203ENST00000446851 PRXQ9BXM0 1461 aa16.08■□□□□ 0.16
LIN54-203ENST00000446851 CLIP1P30622 1438 aa16.08■□□□□ 0.16
LIN54-203ENST00000446851 CHD1O14646 1710 aa16.07■□□□□ 0.16
LIN54-203ENST00000446851 FHOD3Q2V2M9 1422 aa16.07■□□□□ 0.16
LIN54-203ENST00000446851 MYT1LQ9UL68 1186 aa16.07■□□□□ 0.16
LIN54-203ENST00000446851 KIAA0586Q9BVV6 1533 aa16.05■□□□□ 0.16
LIN54-203ENST00000446851 WDR97A6NE52 1622 aa16.02■□□□□ 0.15
LIN54-203ENST00000446851 CUL7Q14999 1698 aa16.01■□□□□ 0.15
LIN54-203ENST00000446851 CEP162Q5TB80 1403 aa16■□□□□ 0.15
LIN54-203ENST00000446851 TNIKQ9UKE5 1360 aa16■□□□□ 0.15
LIN54-203ENST00000446851 CEP170Q5SW79 1584 aa15.99■□□□□ 0.15
LIN54-203ENST00000446851 NUP160Q12769 1436 aa15.99■□□□□ 0.15
LIN54-203ENST00000446851 ZNF777Q9ULD5 760 aaPredicted RBP15.98■□□□□ 0.15
LIN54-203ENST00000446851 PLEKHD1A6NEE1 506 aa15.97■□□□□ 0.15
LIN54-203ENST00000446851 CDK11AQ9UQ88 783 aaPredicted RBP15.96■□□□□ 0.15
LIN54-203ENST00000446851 IQGAP2Q13576 1575 aa15.95■□□□□ 0.14
LIN54-203ENST00000446851 ARHGEF11O15085 1522 aa15.95■□□□□ 0.14
LIN54-203ENST00000446851 FAM69CQ0P6D2 419 aa15.94■□□□□ 0.14
LIN54-203ENST00000446851 ITGAEP38570 1179 aa15.94■□□□□ 0.14
LIN54-203ENST00000446851 ERCC6L2Q5T890 1561 aa15.91■□□□□ 0.14
LIN54-203ENST00000446851 PLB1Q6P1J6 1458 aa15.88■□□□□ 0.13
LIN54-203ENST00000446851 KIF21BO75037 1637 aa15.86■□□□□ 0.13
LIN54-203ENST00000446851 MTUS2Q5JR59 1369 aa15.84■□□□□ 0.13
LIN54-203ENST00000446851 ARAP1Q96P48 1450 aa15.82■□□□□ 0.12
LIN54-203ENST00000446851 FAM50AQ14320 339 aaKnown RBP15.82■□□□□ 0.12
LIN54-203ENST00000446851 UACAQ9BZF9 1416 aa15.81■□□□□ 0.12
LIN54-203ENST00000446851 ARHGAP35Q9NRY4 1499 aa15.81■□□□□ 0.12
LIN54-203ENST00000446851 FMN1Q68DA7 1419 aa15.81■□□□□ 0.12
LIN54-203ENST00000446851 PLPPR3Q6T4P5 718 aa15.79■□□□□ 0.12
LIN54-203ENST00000446851 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
LIN54-203ENST00000446851 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
LIN54-203ENST00000446851 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
LIN54-203ENST00000446851 DISP1Q96F81 1524 aa15.78■□□□□ 0.12
LIN54-203ENST00000446851 CLASP1Q7Z460 1538 aa15.77■□□□□ 0.12
LIN54-203ENST00000446851 KANK4Q5T7N3 995 aaPredicted RBP15.75■□□□□ 0.11
LIN54-203ENST00000446851 UGGT2Q9NYU1 1516 aa15.71■□□□□ 0.11
LIN54-203ENST00000446851 CFDP1Q9UEE9 299 aaPredicted RBP15.71■□□□□ 0.11
LIN54-203ENST00000446851 CTTNBP2Q8WZ74 1663 aa15.71■□□□□ 0.1
LIN54-203ENST00000446851 KIAA0556O60303 1618 aa15.7■□□□□ 0.1
LIN54-203ENST00000446851 CDK13Q14004 1512 aaKnown RBP15.67■□□□□ 0.1
LIN54-203ENST00000446851 VPS8Q8N3P4 1428 aa15.67■□□□□ 0.1
LIN54-203ENST00000446851 CHIC2Q9UKJ5 165 aa15.67■□□□□ 0.1
LIN54-203ENST00000446851 ASXL2Q76L83 1435 aa15.65■□□□□ 0.1
LIN54-203ENST00000446851 ARID4BQ4LE39 1312 aaPredicted RBP15.65■□□□□ 0.1
LIN54-203ENST00000446851 EFCAB5A4FU69 1503 aa15.64■□□□□ 0.09
LIN54-203ENST00000446851 CCNB3Q8WWL7 1395 aa15.62■□□□□ 0.09
LIN54-203ENST00000446851 MLECQ14165 292 aa15.62■□□□□ 0.09
LIN54-203ENST00000446851 ATP10BO94823 1461 aa15.61■□□□□ 0.09
LIN54-203ENST00000446851 EFCAB2Q5VUJ9 269 aa15.6■□□□□ 0.09
LIN54-203ENST00000446851 RAPGEF3O95398 923 aa15.59■□□□□ 0.09
LIN54-203ENST00000446851 HNRNPMP52272 730 aaKnown RBP eCLIP15.59■□□□□ 0.09
LIN54-203ENST00000446851 ABCC2Q92887 1545 aa15.59■□□□□ 0.09
LIN54-203ENST00000446851 CASKIN1Q8WXD9 1431 aa15.58■□□□□ 0.08
LIN54-203ENST00000446851 NUP153P49790 1475 aaKnown RBP15.58■□□□□ 0.08
LIN54-203ENST00000446851 EPRSP07814 1512 aaKnown RBP15.57■□□□□ 0.08
LIN54-203ENST00000446851 ZNF644Q9H582 1327 aaPredicted RBP15.57■□□□□ 0.08
LIN54-203ENST00000446851 TSPY4P0CV99 314 aa15.55■□□□□ 0.08
LIN54-203ENST00000446851 TSPY10P0CW01 314 aa15.55■□□□□ 0.08
LIN54-203ENST00000446851 CD109Q6YHK3 1445 aa15.55■□□□□ 0.08
LIN54-203ENST00000446851 SHROOM2Q13796 1616 aa15.53■□□□□ 0.08
LIN54-203ENST00000446851 PCGF6Q9BYE7 350 aa15.53■□□□□ 0.08
LIN54-203ENST00000446851 PCF11O94913 1555 aaKnown RBP15.53■□□□□ 0.08
LIN54-203ENST00000446851 AFAP1Q8N556 730 aa15.53■□□□□ 0.08
LIN54-203ENST00000446851 RAPGEF6Q8TEU7 1601 aa15.53■□□□□ 0.08
LIN54-203ENST00000446851 CCDC18Q5T9S5 1454 aa15.51■□□□□ 0.07
LIN54-203ENST00000446851 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.5■□□□□ 0.07
LIN54-203ENST00000446851 SAMD9Q5K651 1589 aa15.5■□□□□ 0.07
LIN54-203ENST00000446851 WDR7Q9Y4E6 1490 aa15.5■□□□□ 0.07
LIN54-203ENST00000446851 ESF1Q9H501 851 aaKnown RBP15.49■□□□□ 0.07
LIN54-203ENST00000446851 FYCO1Q9BQS8 1478 aa15.49■□□□□ 0.07
LIN54-203ENST00000446851 ADCY10Q96PN6 1610 aa15.49■□□□□ 0.07
LIN54-203ENST00000446851 RRP7BPQ9NSQ0 103 aa15.49■□□□□ 0.07
LIN54-203ENST00000446851 HECW1Q76N89 1606 aa15.48■□□□□ 0.07
LIN54-203ENST00000446851 TROQ12816 1431 aaPredicted RBP15.48■□□□□ 0.07
LIN54-203ENST00000446851 TRIM52Q96A61 297 aa15.44■□□□□ 0.06
LIN54-203ENST00000446851 ABCA8O94911 1581 aa15.44■□□□□ 0.06
LIN54-203ENST00000446851 KDM5BQ9UGL1 1544 aa15.44■□□□□ 0.06
LIN54-203ENST00000446851 TSPOAP1O95153 1857 aa15.44■□□□□ 0.06
LIN54-203ENST00000446851 GGT6Q6P531 493 aa15.43■□□□□ 0.06
LIN54-203ENST00000446851 ARHGAP5Q13017 1502 aa15.43■□□□□ 0.06
LIN54-203ENST00000446851 UHRF1BP1LA0JNW5 1464 aa15.41■□□□□ 0.06
LIN54-203ENST00000446851 SPAG9O60271 1321 aaKnown RBP15.41■□□□□ 0.06
LIN54-203ENST00000446851 ZCCHC11Q5TAX3 1644 aaKnown RBP15.4■□□□□ 0.06
LIN54-203ENST00000446851 SCAPERQ9BY12 1400 aa15.39■□□□□ 0.05
LIN54-203ENST00000446851 LRRC9Q6ZRR7 1453 aa15.39■□□□□ 0.05
LIN54-203ENST00000446851 NCOA2Q15596 1464 aa15.38■□□□□ 0.05
LIN54-203ENST00000446851 ABCC10Q5T3U5 1492 aa15.38■□□□□ 0.05
LIN54-203ENST00000446851 PHLDB1Q86UU1 1377 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms