RNA–Protein interactions for RNA: ENST00000446836.5

CCDC12-203, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-203ENST00000446836 SHROOM2Q13796 1616 aa17.94■□□□□ 0.46
CCDC12-203ENST00000446836 ARHGEF11O15085 1522 aa17.93■□□□□ 0.46
CCDC12-203ENST00000446836 IQGAP2Q13576 1575 aa17.91■□□□□ 0.46
CCDC12-203ENST00000446836 CTTNBP2Q8WZ74 1663 aa17.91■□□□□ 0.46
CCDC12-203ENST00000446836 JPH4Q96JJ6 628 aa17.9■□□□□ 0.46
CCDC12-203ENST00000446836 RIMBP3CA6NJZ7 1639 aa17.89■□□□□ 0.45
CCDC12-203ENST00000446836 RIMBP3BA6NNM3 1639 aa17.89■□□□□ 0.45
CCDC12-203ENST00000446836 RIMBP3Q9UFD9 1639 aa17.89■□□□□ 0.45
CCDC12-203ENST00000446836 GOLGA3Q08378 1498 aa17.88■□□□□ 0.45
CCDC12-203ENST00000446836 PRG4Q92954 1404 aaPredicted RBP17.85■□□□□ 0.45
CCDC12-203ENST00000446836 UGGT2Q9NYU1 1516 aa17.83■□□□□ 0.45
CCDC12-203ENST00000446836 CARMIL2Q6F5E8 1435 aa17.81■□□□□ 0.44
CCDC12-203ENST00000446836 ARAP1Q96P48 1450 aa17.78■□□□□ 0.44
CCDC12-203ENST00000446836 UBTFP17480 764 aaKnown RBP17.78■□□□□ 0.44
CCDC12-203ENST00000446836 ERCC6L2Q5T890 1561 aa17.78■□□□□ 0.44
CCDC12-203ENST00000446836 DISP1Q96F81 1524 aa17.74■□□□□ 0.43
CCDC12-203ENST00000446836 KIAA0556O60303 1618 aa17.72■□□□□ 0.43
CCDC12-203ENST00000446836 TNIKQ9UKE5 1360 aa17.72■□□□□ 0.43
CCDC12-203ENST00000446836 CYB5RLQ6IPT4 315 aa17.72■□□□□ 0.43
CCDC12-203ENST00000446836 EFCAB5A4FU69 1503 aa17.69■□□□□ 0.42
CCDC12-203ENST00000446836 SAMD9Q5K651 1589 aa17.69■□□□□ 0.42
CCDC12-203ENST00000446836 PTPRGP23470 1445 aa17.68■□□□□ 0.42
CCDC12-203ENST00000446836 EHMT2Q96KQ7 1210 aa17.68■□□□□ 0.42
CCDC12-203ENST00000446836 RANGAP1P46060 587 aaPredicted RBP17.58■□□□□ 0.4
CCDC12-203ENST00000446836 UHRF1BP1LA0JNW5 1464 aa17.57■□□□□ 0.4
CCDC12-203ENST00000446836 UACAQ9BZF9 1416 aa17.57■□□□□ 0.4
CCDC12-203ENST00000446836 ARHGAP35Q9NRY4 1499 aa17.56■□□□□ 0.4
CCDC12-203ENST00000446836 P3H3Q8IVL6 736 aa17.56■□□□□ 0.4
CCDC12-203ENST00000446836 TTBK1Q5TCY1 1321 aaPredicted RBP17.55■□□□□ 0.4
CCDC12-203ENST00000446836 FHOD3Q2V2M9 1422 aa17.55■□□□□ 0.4
CCDC12-203ENST00000446836 ABCC2Q92887 1545 aa17.54■□□□□ 0.4
CCDC12-203ENST00000446836 CLIP1P30622 1438 aa17.54■□□□□ 0.4
CCDC12-203ENST00000446836 ADCY10Q96PN6 1610 aa17.54■□□□□ 0.4
CCDC12-203ENST00000446836 LOC105371045A0A1W2PR82 267 aa17.53■□□□□ 0.4
CCDC12-203ENST00000446836 ABCA8O94911 1581 aa17.53■□□□□ 0.4
CCDC12-203ENST00000446836 NPM1P06748 294 aaKnown RBP eCLIP17.52■□□□□ 0.4
CCDC12-203ENST00000446836 FMN1Q68DA7 1419 aa17.52■□□□□ 0.4
CCDC12-203ENST00000446836 CEP162Q5TB80 1403 aa17.5■□□□□ 0.39
CCDC12-203ENST00000446836 PLB1Q6P1J6 1458 aa17.5■□□□□ 0.39
CCDC12-203ENST00000446836 RAPGEF6Q8TEU7 1601 aa17.47■□□□□ 0.39
CCDC12-203ENST00000446836 KDM5BQ9UGL1 1544 aa17.47■□□□□ 0.39
CCDC12-203ENST00000446836 MAPKBP1O60336 1514 aa17.45■□□□□ 0.38
CCDC12-203ENST00000446836 ZCCHC11Q5TAX3 1644 aaKnown RBP17.4■□□□□ 0.38
CCDC12-203ENST00000446836 HECW1Q76N89 1606 aa17.39■□□□□ 0.38
CCDC12-203ENST00000446836 NUP153P49790 1475 aaKnown RBP17.39■□□□□ 0.37
CCDC12-203ENST00000446836 CASKIN1Q8WXD9 1431 aa17.38■□□□□ 0.37
CCDC12-203ENST00000446836 ATP10BO94823 1461 aa17.37■□□□□ 0.37
CCDC12-203ENST00000446836 FYCO1Q9BQS8 1478 aa17.36■□□□□ 0.37
CCDC12-203ENST00000446836 ASXL2Q76L83 1435 aa17.35■□□□□ 0.37
CCDC12-203ENST00000446836 PCF11O94913 1555 aaKnown RBP17.33■□□□□ 0.37
CCDC12-203ENST00000446836 EPRSP07814 1512 aaKnown RBP17.31■□□□□ 0.36
CCDC12-203ENST00000446836 ABCC10Q5T3U5 1492 aa17.31■□□□□ 0.36
CCDC12-203ENST00000446836 CCDC18Q5T9S5 1454 aa17.31■□□□□ 0.36
CCDC12-203ENST00000446836 WDR7Q9Y4E6 1490 aa17.31■□□□□ 0.36
CCDC12-203ENST00000446836 VPS8Q8N3P4 1428 aa17.3■□□□□ 0.36
CCDC12-203ENST00000446836 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.3■□□□□ 0.36
CCDC12-203ENST00000446836 HNRNPUL2Q1KMD3 747 aaKnown RBP17.3■□□□□ 0.36
CCDC12-203ENST00000446836 ATP1B4Q9UN42 357 aaPredicted RBP17.3■□□□□ 0.36
CCDC12-203ENST00000446836 TRHP20396 242 aaPredicted RBP17.29■□□□□ 0.36
CCDC12-203ENST00000446836 DIP2BQ9P265 1576 aa17.28■□□□□ 0.36
CCDC12-203ENST00000446836 ARID3CA6NKF2 412 aa17.28■□□□□ 0.36
CCDC12-203ENST00000446836 CDK11AQ9UQ88 783 aaPredicted RBP17.28■□□□□ 0.36
CCDC12-203ENST00000446836 PLEKHD1A6NEE1 506 aa17.27■□□□□ 0.36
CCDC12-203ENST00000446836 GLI2P10070 1586 aa17.27■□□□□ 0.35
CCDC12-203ENST00000446836 CDK13Q14004 1512 aaKnown RBP17.26■□□□□ 0.35
CCDC12-203ENST00000446836 KIF13AQ9H1H9 1805 aa17.26■□□□□ 0.35
CCDC12-203ENST00000446836 FAM69CQ0P6D2 419 aa17.24■□□□□ 0.35
CCDC12-203ENST00000446836 LRRIQ1Q96JM4 1722 aa17.24■□□□□ 0.35
CCDC12-203ENST00000446836 TROQ12816 1431 aaPredicted RBP17.19■□□□□ 0.34
CCDC12-203ENST00000446836 KCNH8Q96L42 1107 aa17.18■□□□□ 0.34
CCDC12-203ENST00000446836 MAP3K1Q13233 1512 aa17.17■□□□□ 0.34
CCDC12-203ENST00000446836 CFAP43Q8NDM7 1665 aa17.17■□□□□ 0.34
CCDC12-203ENST00000446836 ABCA9Q8IUA7 1624 aa17.17■□□□□ 0.34
CCDC12-203ENST00000446836 MAP3K4Q9Y6R4 1608 aa17.17■□□□□ 0.34
CCDC12-203ENST00000446836 KIF14Q15058 1648 aa17.14■□□□□ 0.33
CCDC12-203ENST00000446836 TIAM1Q13009 1591 aa17.14■□□□□ 0.33
CCDC12-203ENST00000446836 CD109Q6YHK3 1445 aa17.13■□□□□ 0.33
CCDC12-203ENST00000446836 APLP2Q06481 763 aa17.12■□□□□ 0.33
CCDC12-203ENST00000446836 MTUS2Q5JR59 1369 aa17.12■□□□□ 0.33
CCDC12-203ENST00000446836 TEX14Q8IWB6 1497 aa17.12■□□□□ 0.33
CCDC12-203ENST00000446836 MAGI3Q5TCQ9 1506 aa17.11■□□□□ 0.33
CCDC12-203ENST00000446836 EHBP1L1Q8N3D4 1523 aa17.11■□□□□ 0.33
CCDC12-203ENST00000446836 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.11■□□□□ 0.332e-6■■■□□ 16.6
CCDC12-203ENST00000446836 TSPOAP1O95153 1857 aa17.09■□□□□ 0.33
CCDC12-203ENST00000446836 PPRC1Q5VV67 1664 aaKnown RBP17.07■□□□□ 0.32
CCDC12-203ENST00000446836 TTC37Q6PGP7 1564 aa17.06■□□□□ 0.32
CCDC12-203ENST00000446836 LRRC9Q6ZRR7 1453 aa17.06■□□□□ 0.32
CCDC12-203ENST00000446836 ARAP3Q8WWN8 1544 aa17.06■□□□□ 0.32
CCDC12-203ENST00000446836 PHLDB1Q86UU1 1377 aa17.05■□□□□ 0.32
CCDC12-203ENST00000446836 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
CCDC12-203ENST00000446836 PLCH2O75038 1416 aa17.04■□□□□ 0.32
CCDC12-203ENST00000446836 SUPT6HQ7KZ85 1726 aaKnown RBP17.03■□□□□ 0.32
CCDC12-203ENST00000446836 CFAP74Q9C0B2 1584 aa17.02■□□□□ 0.32
CCDC12-203ENST00000446836 NEO1Q92859 1461 aa17.02■□□□□ 0.32
CCDC12-203ENST00000446836 PREX2Q70Z35 1606 aa16.99■□□□□ 0.31
CCDC12-203ENST00000446836 FANCAO15360 1455 aa16.99■□□□□ 0.31
CCDC12-203ENST00000446836 EFCAB2Q5VUJ9 269 aa16.98■□□□□ 0.31
CCDC12-203ENST00000446836 CCNB3Q8WWL7 1395 aa16.98■□□□□ 0.31
CCDC12-203ENST00000446836 NCOA2Q15596 1464 aa16.98■□□□□ 0.31
CCDC12-203ENST00000446836 CDC42BPAQ5VT25 1732 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms