RNA–Protein interactions for RNA: ENST00000445816.5

SERF2-212, Transcript of small EDRK-rich factor 2, humanhuman

TSL 3

Gene SERF2, Length 2,099 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF2-212ENST00000445816 ARAP1Q96P48 1450 aa22.56■■□□□ 1.2
SERF2-212ENST00000445816 NEUROD1Q13562 356 aa22.54■■□□□ 1.2
SERF2-212ENST00000445816 ZNF316A6NFI3 1004 aaPredicted RBP22.53■■□□□ 1.2
SERF2-212ENST00000445816 IFT140Q96RY7 1462 aa22.53■■□□□ 1.2
SERF2-212ENST00000445816 ARHGAP35Q9NRY4 1499 aa22.52■■□□□ 1.19
SERF2-212ENST00000445816 APLP2Q06481 763 aa22.5■■□□□ 1.19
SERF2-212ENST00000445816 THOC2Q8NI27 1593 aaKnown RBP22.5■■□□□ 1.19
SERF2-212ENST00000445816 AQRO60306 1485 aaKnown RBP eCLIP22.47■■□□□ 1.194e-9■■■■■ 47.1
SERF2-212ENST00000445816 PBRM1Q86U86 1689 aa22.46■■□□□ 1.19
SERF2-212ENST00000445816 CTTNBP2Q8WZ74 1663 aa22.43■■□□□ 1.18
SERF2-212ENST00000445816 GRIN2BQ13224 1484 aa22.42■■□□□ 1.18
SERF2-212ENST00000445816 ZNF608Q9ULD9 1512 aaPredicted RBP22.4■■□□□ 1.18
SERF2-212ENST00000445816 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.18
SERF2-212ENST00000445816 GTF3C3Q9Y5Q9 886 aa22.37■■□□□ 1.17
SERF2-212ENST00000445816 ADAMTS12P58397 1594 aa22.36■■□□□ 1.17
SERF2-212ENST00000445816 EFCAB5A4FU69 1503 aa22.35■■□□□ 1.17
SERF2-212ENST00000445816 EIF4G3O43432 1585 aaKnown RBP22.32■■□□□ 1.16
SERF2-212ENST00000445816 HNRNPUL2Q1KMD3 747 aaKnown RBP22.3■■□□□ 1.16
SERF2-212ENST00000445816 P3H3Q8IVL6 736 aa22.28■■□□□ 1.16
SERF2-212ENST00000445816 CLSPNQ9HAW4 1339 aa22.28■■□□□ 1.16
SERF2-212ENST00000445816 FHOD3Q2V2M9 1422 aa22.26■■□□□ 1.15
SERF2-212ENST00000445816 SNAPC4Q5SXM2 1469 aa22.25■■□□□ 1.15
SERF2-212ENST00000445816 KANK4Q5T7N3 995 aaPredicted RBP22.21■■□□□ 1.15
SERF2-212ENST00000445816 SAMD9Q5K651 1589 aa22.21■■□□□ 1.15
SERF2-212ENST00000445816 MAP3K1Q13233 1512 aa22.2■■□□□ 1.14
SERF2-212ENST00000445816 MAGI1Q96QZ7 1491 aaPredicted RBP22.2■■□□□ 1.14
SERF2-212ENST00000445816 PCF11O94913 1555 aaKnown RBP22.17■■□□□ 1.14
SERF2-212ENST00000445816 IQGAP2Q13576 1575 aa22.17■■□□□ 1.14
SERF2-212ENST00000445816 FMN1Q68DA7 1419 aa22.17■■□□□ 1.14
SERF2-212ENST00000445816 TIAM1Q13009 1591 aa22.16■■□□□ 1.14
SERF2-212ENST00000445816 GRIN2AQ12879 1464 aa22.15■■□□□ 1.14
SERF2-212ENST00000445816 FYCO1Q9BQS8 1478 aa22.15■■□□□ 1.14
SERF2-212ENST00000445816 CASKIN1Q8WXD9 1431 aa22.14■■□□□ 1.13
SERF2-212ENST00000445816 SYNJ2O15056 1496 aa22.12■■□□□ 1.13
SERF2-212ENST00000445816 MIER1Q8N108 512 aa22.11■■□□□ 1.13
SERF2-212ENST00000445816 ATP1B4Q9UN42 357 aaPredicted RBP22.11■■□□□ 1.13
SERF2-212ENST00000445816 CHMP7Q8WUX9 453 aaPredicted RBP22.1■■□□□ 1.13
SERF2-212ENST00000445816 KIAA0586Q9BVV6 1533 aa22.1■■□□□ 1.13
SERF2-212ENST00000445816 CFAP43Q8NDM7 1665 aa22.08■■□□□ 1.13
SERF2-212ENST00000445816 LRRC9Q6ZRR7 1453 aa22.06■■□□□ 1.12
SERF2-212ENST00000445816 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
SERF2-212ENST00000445816 UGGT2Q9NYU1 1516 aa22.06■■□□□ 1.12
SERF2-212ENST00000445816 DHX57Q6P158 1386 aaKnown RBP22.06■■□□□ 1.12
SERF2-212ENST00000445816 MYT1Q01538 1121 aa22.05■■□□□ 1.12
SERF2-212ENST00000445816 FBLN2P98095 1184 aa22.03■■□□□ 1.12
SERF2-212ENST00000445816 YTHDC1Q96MU7 727 aaKnown RBP22.02■■□□□ 1.12
SERF2-212ENST00000445816 CEP170Q5SW79 1584 aa21.99■■□□□ 1.11
SERF2-212ENST00000445816 NUP160Q12769 1436 aa21.96■■□□□ 1.11
SERF2-212ENST00000445816 KIAA0556O60303 1618 aa21.94■■□□□ 1.1
SERF2-212ENST00000445816 CCNB3Q8WWL7 1395 aa21.94■■□□□ 1.1
SERF2-212ENST00000445816 DISP1Q96F81 1524 aa21.94■■□□□ 1.1
SERF2-212ENST00000445816 LRRIQ1Q96JM4 1722 aa21.9■■□□□ 1.1
SERF2-212ENST00000445816 HECW1Q76N89 1606 aa21.9■■□□□ 1.1
SERF2-212ENST00000445816 CCDC18Q5T9S5 1454 aa21.88■■□□□ 1.09
SERF2-212ENST00000445816 MTUS2Q5JR59 1369 aa21.88■■□□□ 1.09
SERF2-212ENST00000445816 PHLDB1Q86UU1 1377 aa21.88■■□□□ 1.09
SERF2-212ENST00000445816 JPH4Q96JJ6 628 aa21.85■■□□□ 1.09
SERF2-212ENST00000445816 CARMIL2Q6F5E8 1435 aa21.83■■□□□ 1.09
SERF2-212ENST00000445816 EPRSP07814 1512 aaKnown RBP21.81■■□□□ 1.08
SERF2-212ENST00000445816 EHBP1L1Q8N3D4 1523 aa21.81■■□□□ 1.08
SERF2-212ENST00000445816 CHD1O14646 1710 aa21.79■■□□□ 1.08
SERF2-212ENST00000445816 SUPT6HQ7KZ85 1726 aaKnown RBP21.76■■□□□ 1.07
SERF2-212ENST00000445816 RAPGEF6Q8TEU7 1601 aa21.76■■□□□ 1.07
SERF2-212ENST00000445816 CDK13Q14004 1512 aaKnown RBP21.75■■□□□ 1.07
SERF2-212ENST00000445816 ITGAEP38570 1179 aa21.75■■□□□ 1.07
SERF2-212ENST00000445816 FAM50AQ14320 339 aaKnown RBP21.75■■□□□ 1.07
SERF2-212ENST00000445816 NCOA2Q15596 1464 aa21.74■■□□□ 1.07
SERF2-212ENST00000445816 MAGI3Q5TCQ9 1506 aa21.74■■□□□ 1.07
SERF2-212ENST00000445816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.72■■□□□ 1.075e-37■□□□□ 10.7
SERF2-212ENST00000445816 NUP153P49790 1475 aaKnown RBP21.72■■□□□ 1.07
SERF2-212ENST00000445816 FGD6Q6ZV73 1430 aa21.71■■□□□ 1.07
SERF2-212ENST00000445816 ARID3CA6NKF2 412 aa21.7■■□□□ 1.06
SERF2-212ENST00000445816 RAB3GAP2Q9H2M9 1393 aa21.69■■□□□ 1.06
SERF2-212ENST00000445816 MYOM3Q5VTT5 1437 aa21.68■■□□□ 1.06
SERF2-212ENST00000445816 ARHGEF11O15085 1522 aa21.68■■□□□ 1.06
SERF2-212ENST00000445816 PRG4Q92954 1404 aaPredicted RBP21.68■■□□□ 1.06
SERF2-212ENST00000445816 PLB1Q6P1J6 1458 aa21.67■■□□□ 1.06
SERF2-212ENST00000445816 MAPKBP1O60336 1514 aa21.66■■□□□ 1.06
SERF2-212ENST00000445816 SETD5Q9C0A6 1442 aa21.66■■□□□ 1.06
SERF2-212ENST00000445816 CDK11AQ9UQ88 783 aaPredicted RBP21.65■■□□□ 1.06
SERF2-212ENST00000445816 SHROOM2Q13796 1616 aa21.61■■□□□ 1.05
SERF2-212ENST00000445816 ABCA8O94911 1581 aa21.6■■□□□ 1.05
SERF2-212ENST00000445816 TIMELESSQ9UNS1 1208 aa21.59■■□□□ 1.05
SERF2-212ENST00000445816 PTPRGP23470 1445 aa21.58■■□□□ 1.05
SERF2-212ENST00000445816 PTPN23Q9H3S7 1636 aa21.57■■□□□ 1.04
SERF2-212ENST00000445816 SUPT16HQ9Y5B9 1047 aaKnown RBP21.54■■□□□ 1.04
SERF2-212ENST00000445816 TROQ12816 1431 aaPredicted RBP21.54■■□□□ 1.04
SERF2-212ENST00000445816 MIA2Q96PC5 1412 aa21.54■■□□□ 1.04
SERF2-212ENST00000445816 CLASP1Q7Z460 1538 aa21.53■■□□□ 1.04
SERF2-212ENST00000445816 TCOF1Q13428 1488 aaKnown RBP21.53■■□□□ 1.04
SERF2-212ENST00000445816 ATP10BO94823 1461 aa21.49■■□□□ 1.03
SERF2-212ENST00000445816 PTPRKQ15262 1439 aa21.46■■□□□ 1.03
SERF2-212ENST00000445816 PLEKHD1A6NEE1 506 aa21.46■■□□□ 1.03
SERF2-212ENST00000445816 ADCY10Q96PN6 1610 aa21.46■■□□□ 1.03
SERF2-212ENST00000445816 ERCC6L2Q5T890 1561 aa21.46■■□□□ 1.03
SERF2-212ENST00000445816 UACAQ9BZF9 1416 aa21.45■■□□□ 1.02
SERF2-212ENST00000445816 HFM1A2PYH4 1435 aa21.42■■□□□ 1.02
SERF2-212ENST00000445816 KIF14Q15058 1648 aa21.41■■□□□ 1.02
SERF2-212ENST00000445816 ITSN2Q9NZM3 1697 aa21.39■■□□□ 1.02
SERF2-212ENST00000445816 GPATCH8Q9UKJ3 1502 aaKnown RBP21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms