RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 CEP170Q5SW79 1584 aa20.41■□□□□ 0.86
LTBR-204ENST00000444814 RAPGEF2Q9Y4G8 1499 aa20.4■□□□□ 0.86
LTBR-204ENST00000444814 RUSC2Q8N2Y8 1516 aa20.36■□□□□ 0.85
LTBR-204ENST00000444814 KIAA0586Q9BVV6 1533 aa20.36■□□□□ 0.85
LTBR-204ENST00000444814 CSRNP3Q8WYN3 585 aa20.34■□□□□ 0.85
LTBR-204ENST00000444814 JPH4Q96JJ6 628 aa20.34■□□□□ 0.85
LTBR-204ENST00000444814 CYB5RLQ6IPT4 315 aa20.3■□□□□ 0.84
LTBR-204ENST00000444814 SHROOM2Q13796 1616 aa20.29■□□□□ 0.84
LTBR-204ENST00000444814 PRXQ9BXM0 1461 aa20.28■□□□□ 0.84
LTBR-204ENST00000444814 POTEDQ86YR6 584 aa20.28■□□□□ 0.84
LTBR-204ENST00000444814 PRG4Q92954 1404 aaPredicted RBP20.27■□□□□ 0.84
LTBR-204ENST00000444814 ARAP1Q96P48 1450 aa20.27■□□□□ 0.83
LTBR-204ENST00000444814 CARMIL2Q6F5E8 1435 aa20.24■□□□□ 0.83
LTBR-204ENST00000444814 IQGAP2Q13576 1575 aa20.23■□□□□ 0.83
LTBR-204ENST00000444814 FAM9AQ8IZU1 332 aaPredicted RBP20.21■□□□□ 0.83
LTBR-204ENST00000444814 CTTNBP2Q8WZ74 1663 aa20.13■□□□□ 0.81
LTBR-204ENST00000444814 GOLGA3Q08378 1498 aa20.13■□□□□ 0.81
LTBR-204ENST00000444814 ERCC6L2Q5T890 1561 aa20.12■□□□□ 0.81
LTBR-204ENST00000444814 KIF21BO75037 1637 aa20.11■□□□□ 0.81
LTBR-204ENST00000444814 UGGT2Q9NYU1 1516 aa20.11■□□□□ 0.81
LTBR-204ENST00000444814 TNIKQ9UKE5 1360 aa20.1■□□□□ 0.81
LTBR-204ENST00000444814 PTPRGP23470 1445 aa20.08■□□□□ 0.8
LTBR-204ENST00000444814 NPM1P06748 294 aaKnown RBP eCLIP20.07■□□□□ 0.8
LTBR-204ENST00000444814 UBTFP17480 764 aaKnown RBP20.03■□□□□ 0.8
LTBR-204ENST00000444814 DISP1Q96F81 1524 aa20.01■□□□□ 0.79
LTBR-204ENST00000444814 KIAA0556O60303 1618 aa20■□□□□ 0.79
LTBR-204ENST00000444814 TTBK1Q5TCY1 1321 aaPredicted RBP19.98■□□□□ 0.79
LTBR-204ENST00000444814 TRHP20396 242 aaPredicted RBP19.95■□□□□ 0.78
LTBR-204ENST00000444814 UACAQ9BZF9 1416 aa19.93■□□□□ 0.78
LTBR-204ENST00000444814 UHRF1BP1LA0JNW5 1464 aa19.91■□□□□ 0.78
LTBR-204ENST00000444814 EFCAB5A4FU69 1503 aa19.9■□□□□ 0.78
LTBR-204ENST00000444814 EHMT2Q96KQ7 1210 aa19.89■□□□□ 0.77
LTBR-204ENST00000444814 RANGAP1P46060 587 aaPredicted RBP19.87■□□□□ 0.77
LTBR-204ENST00000444814 ADCY10Q96PN6 1610 aa19.87■□□□□ 0.77
LTBR-204ENST00000444814 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
LTBR-204ENST00000444814 SAMD9Q5K651 1589 aa19.86■□□□□ 0.77
LTBR-204ENST00000444814 P3H3Q8IVL6 736 aa19.85■□□□□ 0.77
LTBR-204ENST00000444814 MAPKBP1O60336 1514 aa19.83■□□□□ 0.77
LTBR-204ENST00000444814 KDM5BQ9UGL1 1544 aa19.78■□□□□ 0.76
LTBR-204ENST00000444814 PLB1Q6P1J6 1458 aa19.78■□□□□ 0.76
LTBR-204ENST00000444814 ABCA8O94911 1581 aa19.77■□□□□ 0.76
LTBR-204ENST00000444814 FHOD3Q2V2M9 1422 aa19.76■□□□□ 0.75
LTBR-204ENST00000444814 FMN1Q68DA7 1419 aa19.75■□□□□ 0.75
LTBR-204ENST00000444814 ABCC10Q5T3U5 1492 aa19.73■□□□□ 0.75
LTBR-204ENST00000444814 ASXL2Q76L83 1435 aa19.72■□□□□ 0.75
LTBR-204ENST00000444814 FAM69CQ0P6D2 419 aa19.71■□□□□ 0.75
LTBR-204ENST00000444814 RAPGEF6Q8TEU7 1601 aa19.7■□□□□ 0.74
LTBR-204ENST00000444814 ARHGAP35Q9NRY4 1499 aa19.69■□□□□ 0.74
LTBR-204ENST00000444814 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.69■□□□□ 0.74
LTBR-204ENST00000444814 MSH5O43196 834 aa19.69■□□□□ 0.74
LTBR-204ENST00000444814 HNRNPUL2Q1KMD3 747 aaKnown RBP19.69■□□□□ 0.74
LTBR-204ENST00000444814 ZCCHC11Q5TAX3 1644 aaKnown RBP19.68■□□□□ 0.74
LTBR-204ENST00000444814 CLIP1P30622 1438 aa19.67■□□□□ 0.74
LTBR-204ENST00000444814 WDR7Q9Y4E6 1490 aa19.65■□□□□ 0.74
LTBR-204ENST00000444814 DIP2BQ9P265 1576 aa19.64■□□□□ 0.73
LTBR-204ENST00000444814 ATP1B4Q9UN42 357 aaPredicted RBP19.61■□□□□ 0.73
LTBR-204ENST00000444814 ATP10BO94823 1461 aa19.61■□□□□ 0.73
LTBR-204ENST00000444814 CDK11AQ9UQ88 783 aaPredicted RBP19.61■□□□□ 0.73
LTBR-204ENST00000444814 GLI2P10070 1586 aa19.6■□□□□ 0.73
LTBR-204ENST00000444814 NUP153P49790 1475 aaKnown RBP19.6■□□□□ 0.73
LTBR-204ENST00000444814 PLEKHD1A6NEE1 506 aa19.6■□□□□ 0.73
LTBR-204ENST00000444814 HECW1Q76N89 1606 aa19.59■□□□□ 0.73
LTBR-204ENST00000444814 ARID3CA6NKF2 412 aa19.59■□□□□ 0.73
LTBR-204ENST00000444814 EPRSP07814 1512 aaKnown RBP19.59■□□□□ 0.73
LTBR-204ENST00000444814 KIF13AQ9H1H9 1805 aa19.57■□□□□ 0.72
LTBR-204ENST00000444814 CEP162Q5TB80 1403 aa19.56■□□□□ 0.72
LTBR-204ENST00000444814 KCNH8Q96L42 1107 aa19.56■□□□□ 0.72
LTBR-204ENST00000444814 TEX14Q8IWB6 1497 aa19.53■□□□□ 0.72
LTBR-204ENST00000444814 CASKIN1Q8WXD9 1431 aa19.53■□□□□ 0.72
LTBR-204ENST00000444814 LOC105371045A0A1W2PR82 267 aa19.52■□□□□ 0.71
LTBR-204ENST00000444814 CCDC18Q5T9S5 1454 aa19.52■□□□□ 0.71
LTBR-204ENST00000444814 FYCO1Q9BQS8 1478 aa19.5■□□□□ 0.71
LTBR-204ENST00000444814 PIAS4Q8N2W9 510 aaPredicted RBP19.49■□□□□ 0.71
LTBR-204ENST00000444814 CD109Q6YHK3 1445 aa19.48■□□□□ 0.71
LTBR-204ENST00000444814 CFAP43Q8NDM7 1665 aa19.46■□□□□ 0.71
LTBR-204ENST00000444814 MAP3K4Q9Y6R4 1608 aa19.46■□□□□ 0.7
LTBR-204ENST00000444814 CDK13Q14004 1512 aaKnown RBP19.44■□□□□ 0.7
LTBR-204ENST00000444814 PCF11O94913 1555 aaKnown RBP19.44■□□□□ 0.7
LTBR-204ENST00000444814 PLPPR3Q6T4P5 718 aa19.44■□□□□ 0.7
LTBR-204ENST00000444814 MAGI3Q5TCQ9 1506 aa19.42■□□□□ 0.7
LTBR-204ENST00000444814 TSPOAP1O95153 1857 aa19.42■□□□□ 0.7
LTBR-204ENST00000444814 PHLDB1Q86UU1 1377 aa19.41■□□□□ 0.7
LTBR-204ENST00000444814 ABCA9Q8IUA7 1624 aa19.4■□□□□ 0.7
LTBR-204ENST00000444814 TROQ12816 1431 aaPredicted RBP19.39■□□□□ 0.69
LTBR-204ENST00000444814 PPP6R1Q9UPN7 881 aa19.39■□□□□ 0.69
LTBR-204ENST00000444814 KDM6BO15054 1643 aa19.37■□□□□ 0.69
LTBR-204ENST00000444814 VPS8Q8N3P4 1428 aa19.35■□□□□ 0.69
LTBR-204ENST00000444814 KIF14Q15058 1648 aa19.35■□□□□ 0.69
LTBR-204ENST00000444814 PPRC1Q5VV67 1664 aaKnown RBP19.32■□□□□ 0.68
LTBR-204ENST00000444814 APLP2Q06481 763 aa19.32■□□□□ 0.68
LTBR-204ENST00000444814 NEO1Q92859 1461 aa19.32■□□□□ 0.68
LTBR-204ENST00000444814 MTUS2Q5JR59 1369 aa19.31■□□□□ 0.68
LTBR-204ENST00000444814 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.31■□□□□ 0.68
LTBR-204ENST00000444814 CFAP74Q9C0B2 1584 aa19.3■□□□□ 0.68
LTBR-204ENST00000444814 ADRA2BP18089 450 aa19.29■□□□□ 0.68
LTBR-204ENST00000444814 PLCH2O75038 1416 aa19.27■□□□□ 0.67
LTBR-204ENST00000444814 EFCAB2Q5VUJ9 269 aa19.27■□□□□ 0.67
LTBR-204ENST00000444814 FANCAO15360 1455 aa19.26■□□□□ 0.67
LTBR-204ENST00000444814 ARAP3Q8WWN8 1544 aa19.26■□□□□ 0.67
LTBR-204ENST00000444814 LRRIQ1Q96JM4 1722 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms