RNA–Protein interactions for RNA: ENST00000444719.5

LMBR1-211, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 762 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-211ENST00000444719 JPH4Q96JJ6 628 aa38.04■■■■□ 3.68
LMBR1-211ENST00000444719 PRG4Q92954 1404 aaPredicted RBP37.98■■■■□ 3.67
LMBR1-211ENST00000444719 KIAA0586Q9BVV6 1533 aa37.91■■■■□ 3.66
LMBR1-211ENST00000444719 TRHP20396 242 aaPredicted RBP37.9■■■■□ 3.66
LMBR1-211ENST00000444719 RAPGEF2Q9Y4G8 1499 aa37.77■■■■□ 3.64
LMBR1-211ENST00000444719 IQGAP2Q13576 1575 aa37.68■■■■□ 3.62
LMBR1-211ENST00000444719 TTBK1Q5TCY1 1321 aaPredicted RBP37.57■■■■□ 3.6
LMBR1-211ENST00000444719 CARMIL2Q6F5E8 1435 aa37.53■■■■□ 3.6
LMBR1-211ENST00000444719 PRXQ9BXM0 1461 aa37.52■■■■□ 3.6
LMBR1-211ENST00000444719 CTTNBP2Q8WZ74 1663 aa37.49■■■■□ 3.59
LMBR1-211ENST00000444719 PTPRGP23470 1445 aa37.47■■■■□ 3.59
LMBR1-211ENST00000444719 ADCY10Q96PN6 1610 aa37.47■■■■□ 3.59
LMBR1-211ENST00000444719 CSRNP3Q8WYN3 585 aa37.46■■■■□ 3.59
LMBR1-211ENST00000444719 TNIKQ9UKE5 1360 aa37.44■■■■□ 3.58
LMBR1-211ENST00000444719 DISP1Q96F81 1524 aa37.43■■■■□ 3.58
LMBR1-211ENST00000444719 NPM1P06748 294 aaKnown RBP eCLIP37.43■■■■□ 3.58
LMBR1-211ENST00000444719 UGGT2Q9NYU1 1516 aa37.42■■■■□ 3.58
LMBR1-211ENST00000444719 FAM9AQ8IZU1 332 aaPredicted RBP37.39■■■■□ 3.58
LMBR1-211ENST00000444719 CHIC1Q5VXU3 224 aa37.38■■■■□ 3.57
LMBR1-211ENST00000444719 EEA1Q15075 1411 aa37.33■■■■□ 3.57
LMBR1-211ENST00000444719 KIAA0556O60303 1618 aa37.32■■■■□ 3.56
LMBR1-211ENST00000444719 KIF13AQ9H1H9 1805 aa37.29■■■■□ 3.56
LMBR1-211ENST00000444719 MAPKBP1O60336 1514 aa37.22■■■■□ 3.55
LMBR1-211ENST00000444719 UACAQ9BZF9 1416 aa37.19■■■■□ 3.54
LMBR1-211ENST00000444719 GOLGA3Q08378 1498 aa37.18■■■■□ 3.54
LMBR1-211ENST00000444719 FAM69CQ0P6D2 419 aa37.16■■■■□ 3.54
LMBR1-211ENST00000444719 ABCC2Q92887 1545 aa37.15■■■■□ 3.54
LMBR1-211ENST00000444719 UHRF1BP1LA0JNW5 1464 aa37.13■■■■□ 3.54
LMBR1-211ENST00000444719 ABCC10Q5T3U5 1492 aa37.13■■■■□ 3.54
LMBR1-211ENST00000444719 DIP2BQ9P265 1576 aa37.08■■■■□ 3.53
LMBR1-211ENST00000444719 P3H3Q8IVL6 736 aa37.08■■■■□ 3.53
LMBR1-211ENST00000444719 RANGAP1P46060 587 aaPredicted RBP37.03■■■■□ 3.52
LMBR1-211ENST00000444719 KIF21BO75037 1637 aa37.03■■■■□ 3.52
LMBR1-211ENST00000444719 PLB1Q6P1J6 1458 aa37.02■■■■□ 3.52
LMBR1-211ENST00000444719 EHMT2Q96KQ7 1210 aa37.02■■■■□ 3.52
LMBR1-211ENST00000444719 ASXL2Q76L83 1435 aa37■■■■□ 3.51
LMBR1-211ENST00000444719 KDM5BQ9UGL1 1544 aa36.98■■■■□ 3.51
LMBR1-211ENST00000444719 ZCCHC11Q5TAX3 1644 aaKnown RBP36.98■■■■□ 3.51
LMBR1-211ENST00000444719 TSPOAP1O95153 1857 aa36.96■■■■□ 3.51
LMBR1-211ENST00000444719 ABCA8O94911 1581 aa36.93■■■■□ 3.5
LMBR1-211ENST00000444719 SAMD9Q5K651 1589 aa36.92■■■■□ 3.5
LMBR1-211ENST00000444719 UBTFP17480 764 aaKnown RBP36.84■■■■□ 3.49
LMBR1-211ENST00000444719 ARID3CA6NKF2 412 aa36.78■■■■□ 3.48
LMBR1-211ENST00000444719 GLI2P10070 1586 aa36.77■■■■□ 3.48
LMBR1-211ENST00000444719 FHOD3Q2V2M9 1422 aa36.76■■■■□ 3.47
LMBR1-211ENST00000444719 EPRSP07814 1512 aaKnown RBP36.75■■■■□ 3.47
LMBR1-211ENST00000444719 WDR7Q9Y4E6 1490 aa36.71■■■■□ 3.47
LMBR1-211ENST00000444719 RAPGEF6Q8TEU7 1601 aa36.69■■■■□ 3.46
LMBR1-211ENST00000444719 KCNH8Q96L42 1107 aa36.67■■■■□ 3.46
LMBR1-211ENST00000444719 PPRC1Q5VV67 1664 aaKnown RBP36.67■■■■□ 3.46
LMBR1-211ENST00000444719 EFCAB5A4FU69 1503 aa36.65■■■■□ 3.46
LMBR1-211ENST00000444719 ATP10BO94823 1461 aa36.65■■■■□ 3.46
LMBR1-211ENST00000444719 MAP3K4Q9Y6R4 1608 aa36.63■■■■□ 3.45
LMBR1-211ENST00000444719 KDM6BO15054 1643 aa36.63■■■■□ 3.45
LMBR1-211ENST00000444719 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.56■■■■□ 3.44
LMBR1-211ENST00000444719 HNRNPUL2Q1KMD3 747 aaKnown RBP36.56■■■■□ 3.44
LMBR1-211ENST00000444719 NUP153P49790 1475 aaKnown RBP36.53■■■■□ 3.44
LMBR1-211ENST00000444719 ARHGAP35Q9NRY4 1499 aa36.48■■■■□ 3.43
LMBR1-211ENST00000444719 CFAP43Q8NDM7 1665 aa36.47■■■■□ 3.43
LMBR1-211ENST00000444719 TEX14Q8IWB6 1497 aa36.45■■■■□ 3.43
LMBR1-211ENST00000444719 CD109Q6YHK3 1445 aa36.45■■■■□ 3.43
LMBR1-211ENST00000444719 ATP1B4Q9UN42 357 aaPredicted RBP36.37■■■■□ 3.41
LMBR1-211ENST00000444719 COL17A1Q9UMD9 1497 aaPredicted RBP36.36■■■■□ 3.41
LMBR1-211ENST00000444719 MAGI3Q5TCQ9 1506 aa36.34■■■■□ 3.41
LMBR1-211ENST00000444719 FMN1Q68DA7 1419 aa36.34■■■■□ 3.41
LMBR1-211ENST00000444719 PLEKHD1A6NEE1 506 aa36.32■■■■□ 3.4
LMBR1-211ENST00000444719 ABCA9Q8IUA7 1624 aa36.3■■■■□ 3.4
LMBR1-211ENST00000444719 CDK13Q14004 1512 aaKnown RBP36.29■■■■□ 3.4
LMBR1-211ENST00000444719 AEBP2Q6ZN18 517 aaPredicted RBP36.25■■■■□ 3.39
LMBR1-211ENST00000444719 HECW1Q76N89 1606 aa36.24■■■■□ 3.39
LMBR1-211ENST00000444719 CLIP1P30622 1438 aa36.14■■■■□ 3.38
LMBR1-211ENST00000444719 LRRIQ1Q96JM4 1722 aa36.13■■■■□ 3.37
LMBR1-211ENST00000444719 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.09■■■■□ 3.371e-6■■■□□ 16.9
LMBR1-211ENST00000444719 PCF11O94913 1555 aaKnown RBP36.07■■■■□ 3.37
LMBR1-211ENST00000444719 TTC37Q6PGP7 1564 aa36.06■■■■□ 3.36
LMBR1-211ENST00000444719 CDK11AQ9UQ88 783 aaPredicted RBP36.05■■■■□ 3.36
LMBR1-211ENST00000444719 ARAP3Q8WWN8 1544 aa36.04■■■■□ 3.36
LMBR1-211ENST00000444719 CASKIN1Q8WXD9 1431 aa36.02■■■■□ 3.36
LMBR1-211ENST00000444719 NEO1Q92859 1461 aa36.01■■■■□ 3.36
LMBR1-211ENST00000444719 PHLDB1Q86UU1 1377 aa36.01■■■■□ 3.35
LMBR1-211ENST00000444719 KDM4FA0A1W2PPD8 638 aa35.99■■■■□ 3.35
LMBR1-211ENST00000444719 RAPGEF3O95398 923 aa35.96■■■■□ 3.35
LMBR1-211ENST00000444719 LOC105371045A0A1W2PR82 267 aa35.95■■■■□ 3.35
LMBR1-211ENST00000444719 KIF14Q15058 1648 aa35.94■■■■□ 3.34
LMBR1-211ENST00000444719 FANCAO15360 1455 aa35.92■■■■□ 3.34
LMBR1-211ENST00000444719 TROQ12816 1431 aaPredicted RBP35.92■■■■□ 3.34
LMBR1-211ENST00000444719 FYCO1Q9BQS8 1478 aa35.92■■■■□ 3.34
LMBR1-211ENST00000444719 CCDC18Q5T9S5 1454 aa35.91■■■■□ 3.34
LMBR1-211ENST00000444719 CEP162Q5TB80 1403 aa35.89■■■■□ 3.34
LMBR1-211ENST00000444719 AKNAQ7Z591 1439 aa35.89■■■■□ 3.34
LMBR1-211ENST00000444719 CFAP74Q9C0B2 1584 aa35.89■■■■□ 3.34
LMBR1-211ENST00000444719 MYO5CQ9NQX4 1742 aa35.86■■■■□ 3.33
LMBR1-211ENST00000444719 PLCH2O75038 1416 aa35.84■■■■□ 3.33
LMBR1-211ENST00000444719 ADGRL1O94910 1474 aa35.84■■■■□ 3.33
LMBR1-211ENST00000444719 FRMPD1Q5SYB0 1578 aa35.83■■■■□ 3.33
LMBR1-211ENST00000444719 DENND4BO75064 1496 aaPredicted RBP35.8■■■■□ 3.32
LMBR1-211ENST00000444719 RICTORQ6R327 1708 aa35.78■■■■□ 3.32
LMBR1-211ENST00000444719 EFCAB2Q5VUJ9 269 aa35.75■■■■□ 3.31
LMBR1-211ENST00000444719 ARHGAP5Q13017 1502 aa35.7■■■■□ 3.31
LMBR1-211ENST00000444719 SCAPERQ9BY12 1400 aa35.7■■■■□ 3.31
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms