RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 PRG4Q92954 1404 aaPredicted RBP35.87■■■■□ 3.33
CDKN3-204ENST00000442975 JPH4Q96JJ6 628 aa35.86■■■■□ 3.33
CDKN3-204ENST00000442975 KIAA0586Q9BVV6 1533 aa35.8■■■■□ 3.32
CDKN3-204ENST00000442975 TRHP20396 242 aaPredicted RBP35.75■■■■□ 3.31
CDKN3-204ENST00000442975 RAPGEF2Q9Y4G8 1499 aa35.68■■■■□ 3.3
CDKN3-204ENST00000442975 IQGAP2Q13576 1575 aa35.58■■■■□ 3.29
CDKN3-204ENST00000442975 CARMIL2Q6F5E8 1435 aa35.48■■■■□ 3.27
CDKN3-204ENST00000442975 PRXQ9BXM0 1461 aa35.46■■■■□ 3.27
CDKN3-204ENST00000442975 TTBK1Q5TCY1 1321 aaPredicted RBP35.45■■■■□ 3.27
CDKN3-204ENST00000442975 PTPRGP23470 1445 aa35.39■■■■□ 3.26
CDKN3-204ENST00000442975 TNIKQ9UKE5 1360 aa35.38■■■■□ 3.25
CDKN3-204ENST00000442975 DISP1Q96F81 1524 aa35.35■■■■□ 3.25
CDKN3-204ENST00000442975 UGGT2Q9NYU1 1516 aa35.35■■■■□ 3.25
CDKN3-204ENST00000442975 ADCY10Q96PN6 1610 aa35.34■■■■□ 3.25
CDKN3-204ENST00000442975 CSRNP3Q8WYN3 585 aa35.33■■■■□ 3.25
CDKN3-204ENST00000442975 EEA1Q15075 1411 aa35.32■■■■□ 3.24
CDKN3-204ENST00000442975 NPM1P06748 294 aaKnown RBP eCLIP35.31■■■■□ 3.24
CDKN3-204ENST00000442975 CTTNBP2Q8WZ74 1663 aa35.28■■■■□ 3.24
CDKN3-204ENST00000442975 FAM9AQ8IZU1 332 aaPredicted RBP35.27■■■■□ 3.24
CDKN3-204ENST00000442975 KIAA0556O60303 1618 aa35.25■■■■□ 3.23
CDKN3-204ENST00000442975 CHIC1Q5VXU3 224 aa35.24■■■■□ 3.23
CDKN3-204ENST00000442975 MAPKBP1O60336 1514 aa35.17■■■■□ 3.22
CDKN3-204ENST00000442975 GOLGA3Q08378 1498 aa35.16■■■■□ 3.22
CDKN3-204ENST00000442975 UACAQ9BZF9 1416 aa35.14■■■■□ 3.22
CDKN3-204ENST00000442975 ABCC2Q92887 1545 aa35.11■■■■□ 3.21
CDKN3-204ENST00000442975 UHRF1BP1LA0JNW5 1464 aa35.08■■■■□ 3.21
CDKN3-204ENST00000442975 ABCC10Q5T3U5 1492 aa35.08■■■■□ 3.21
CDKN3-204ENST00000442975 FAM69CQ0P6D2 419 aa35.06■■■■□ 3.2
CDKN3-204ENST00000442975 DIP2BQ9P265 1576 aa35.01■■■■□ 3.2
CDKN3-204ENST00000442975 KIF13AQ9H1H9 1805 aa35.01■■■■□ 3.19
CDKN3-204ENST00000442975 PLB1Q6P1J6 1458 aa34.97■■■■□ 3.19
CDKN3-204ENST00000442975 KIF21BO75037 1637 aa34.96■■■■□ 3.19
CDKN3-204ENST00000442975 P3H3Q8IVL6 736 aa34.95■■■■□ 3.19
CDKN3-204ENST00000442975 ASXL2Q76L83 1435 aa34.95■■■■□ 3.19
CDKN3-204ENST00000442975 RANGAP1P46060 587 aaPredicted RBP34.93■■■■□ 3.18
CDKN3-204ENST00000442975 KDM5BQ9UGL1 1544 aa34.91■■■■□ 3.18
CDKN3-204ENST00000442975 EHMT2Q96KQ7 1210 aa34.91■■■■□ 3.18
CDKN3-204ENST00000442975 SAMD9Q5K651 1589 aa34.87■■■■□ 3.17
CDKN3-204ENST00000442975 ABCA8O94911 1581 aa34.86■■■■□ 3.17
CDKN3-204ENST00000442975 ZCCHC11Q5TAX3 1644 aaKnown RBP34.85■■■■□ 3.17
CDKN3-204ENST00000442975 UBTFP17480 764 aaKnown RBP34.76■■■■□ 3.16
CDKN3-204ENST00000442975 FHOD3Q2V2M9 1422 aa34.74■■■■□ 3.15
CDKN3-204ENST00000442975 ARID3CA6NKF2 412 aa34.73■■■■□ 3.15
CDKN3-204ENST00000442975 WDR7Q9Y4E6 1490 aa34.72■■■■□ 3.15
CDKN3-204ENST00000442975 EPRSP07814 1512 aaKnown RBP34.72■■■■□ 3.15
CDKN3-204ENST00000442975 GLI2P10070 1586 aa34.7■■■■□ 3.14
CDKN3-204ENST00000442975 EFCAB5A4FU69 1503 aa34.68■■■■□ 3.14
CDKN3-204ENST00000442975 TSPOAP1O95153 1857 aa34.65■■■■□ 3.14
CDKN3-204ENST00000442975 RAPGEF6Q8TEU7 1601 aa34.61■■■■□ 3.13
CDKN3-204ENST00000442975 ATP10BO94823 1461 aa34.57■■■■□ 3.12
CDKN3-204ENST00000442975 KDM6BO15054 1643 aa34.56■■■■□ 3.12
CDKN3-204ENST00000442975 KCNH8Q96L42 1107 aa34.56■■■■□ 3.12
CDKN3-204ENST00000442975 MAP3K4Q9Y6R4 1608 aa34.53■■■■□ 3.12
CDKN3-204ENST00000442975 NUP153P49790 1475 aaKnown RBP34.52■■■■□ 3.12
CDKN3-204ENST00000442975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.51■■■■□ 3.12
CDKN3-204ENST00000442975 HNRNPUL2Q1KMD3 747 aaKnown RBP34.51■■■■□ 3.12
CDKN3-204ENST00000442975 PPRC1Q5VV67 1664 aaKnown RBP34.5■■■■□ 3.11
CDKN3-204ENST00000442975 TEX14Q8IWB6 1497 aa34.46■■■■□ 3.11
CDKN3-204ENST00000442975 ARHGAP35Q9NRY4 1499 aa34.46■■■■□ 3.11
CDKN3-204ENST00000442975 CD109Q6YHK3 1445 aa34.42■■■■□ 3.1
CDKN3-204ENST00000442975 FMN1Q68DA7 1419 aa34.37■■■■□ 3.09
CDKN3-204ENST00000442975 CFAP43Q8NDM7 1665 aa34.36■■■■□ 3.09
CDKN3-204ENST00000442975 MAGI3Q5TCQ9 1506 aa34.33■■■■□ 3.09
CDKN3-204ENST00000442975 ATP1B4Q9UN42 357 aaPredicted RBP34.31■■■■□ 3.08
CDKN3-204ENST00000442975 COL17A1Q9UMD9 1497 aaPredicted RBP34.28■■■■□ 3.08
CDKN3-204ENST00000442975 CDK13Q14004 1512 aaKnown RBP34.28■■■■□ 3.08
CDKN3-204ENST00000442975 PLEKHD1A6NEE1 506 aa34.26■■■■□ 3.08
CDKN3-204ENST00000442975 HECW1Q76N89 1606 aa34.25■■■■□ 3.07
CDKN3-204ENST00000442975 ABCA9Q8IUA7 1624 aa34.24■■■■□ 3.07
CDKN3-204ENST00000442975 AEBP2Q6ZN18 517 aaPredicted RBP34.2■■■■□ 3.07
CDKN3-204ENST00000442975 CLIP1P30622 1438 aa34.18■■■■□ 3.06
CDKN3-204ENST00000442975 PCF11O94913 1555 aaKnown RBP34.1■■■■□ 3.05
CDKN3-204ENST00000442975 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.06■■■■□ 3.04
CDKN3-204ENST00000442975 CASKIN1Q8WXD9 1431 aa34.05■■■■□ 3.04
CDKN3-204ENST00000442975 CDK11AQ9UQ88 783 aaPredicted RBP34.05■■■■□ 3.04
CDKN3-204ENST00000442975 TTC37Q6PGP7 1564 aa34.05■■■■□ 3.04
CDKN3-204ENST00000442975 NEO1Q92859 1461 aa34.03■■■■□ 3.04
CDKN3-204ENST00000442975 ARAP3Q8WWN8 1544 aa34.02■■■■□ 3.04
CDKN3-204ENST00000442975 PHLDB1Q86UU1 1377 aa34.01■■■■□ 3.04
CDKN3-204ENST00000442975 CCDC18Q5T9S5 1454 aa33.97■■■■□ 3.03
CDKN3-204ENST00000442975 FYCO1Q9BQS8 1478 aa33.97■■■■□ 3.03
CDKN3-204ENST00000442975 TROQ12816 1431 aaPredicted RBP33.96■■■■□ 3.03
CDKN3-204ENST00000442975 CEP162Q5TB80 1403 aa33.96■■■■□ 3.03
CDKN3-204ENST00000442975 FANCAO15360 1455 aa33.95■■■■□ 3.02
CDKN3-204ENST00000442975 LRRIQ1Q96JM4 1722 aa33.93■■■■□ 3.02
CDKN3-204ENST00000442975 KIF14Q15058 1648 aa33.92■■■■□ 3.02
CDKN3-204ENST00000442975 KDM4FA0A1W2PPD8 638 aa33.91■■■■□ 3.02
CDKN3-204ENST00000442975 RAPGEF3O95398 923 aa33.91■■■■□ 3.02
CDKN3-204ENST00000442975 CFAP74Q9C0B2 1584 aa33.89■■■■□ 3.02
CDKN3-204ENST00000442975 AKNAQ7Z591 1439 aa33.88■■■■□ 3.01
CDKN3-204ENST00000442975 ADGRL1O94910 1474 aa33.86■■■■□ 3.01
CDKN3-204ENST00000442975 PLCH2O75038 1416 aa33.85■■■■□ 3.01
CDKN3-204ENST00000442975 DENND4BO75064 1496 aaPredicted RBP33.83■■■■□ 3.01
CDKN3-204ENST00000442975 LOC105371045A0A1W2PR82 267 aa33.83■■■■□ 3.01
CDKN3-204ENST00000442975 FRMPD1Q5SYB0 1578 aa33.83■■■■□ 3.01
CDKN3-204ENST00000442975 MYO5CQ9NQX4 1742 aa33.76■■■■□ 3
CDKN3-204ENST00000442975 ARHGAP5Q13017 1502 aa33.74■■■□□ 2.99
CDKN3-204ENST00000442975 EFCAB2Q5VUJ9 269 aa33.74■■■□□ 2.99
CDKN3-204ENST00000442975 SCAPERQ9BY12 1400 aa33.71■■■□□ 2.99
CDKN3-204ENST00000442975 RICTORQ6R327 1708 aa33.68■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms