RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 JPH4Q96JJ6 628 aa20.41■□□□□ 0.86
TTC28-203ENST00000442232 IGF1RP08069 1367 aa20.38■□□□□ 0.85
TTC28-203ENST00000442232 KIAA0586Q9BVV6 1533 aa20.35■□□□□ 0.85
TTC28-203ENST00000442232 CARMIL1Q5VZK9 1371 aa20.3■□□□□ 0.84
TTC28-203ENST00000442232 NPM1P06748 294 aaKnown RBP eCLIP20.26■□□□□ 0.83
TTC28-203ENST00000442232 KIF13AQ9H1H9 1805 aa20.25■□□□□ 0.83
TTC28-203ENST00000442232 ADCY10Q96PN6 1610 aa20.23■□□□□ 0.83
TTC28-203ENST00000442232 IQGAP2Q13576 1575 aa20.22■□□□□ 0.83
TTC28-203ENST00000442232 CARMIL2Q6F5E8 1435 aa20.2■□□□□ 0.82
TTC28-203ENST00000442232 MAPKBP1O60336 1514 aa20.19■□□□□ 0.82
TTC28-203ENST00000442232 RAPGEF2Q9Y4G8 1499 aa20.16■□□□□ 0.82
TTC28-203ENST00000442232 PTPRGP23470 1445 aa20.15■□□□□ 0.82
TTC28-203ENST00000442232 ABCC10Q5T3U5 1492 aa20.13■□□□□ 0.81
TTC28-203ENST00000442232 TNIKQ9UKE5 1360 aa20.13■□□□□ 0.81
TTC28-203ENST00000442232 TTBK1Q5TCY1 1321 aaPredicted RBP20.13■□□□□ 0.81
TTC28-203ENST00000442232 DIP2BQ9P265 1576 aa20.12■□□□□ 0.81
TTC28-203ENST00000442232 FAM69CQ0P6D2 419 aa20.11■□□□□ 0.81
TTC28-203ENST00000442232 CTTNBP2Q8WZ74 1663 aa20.08■□□□□ 0.81
TTC28-203ENST00000442232 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
TTC28-203ENST00000442232 UGGT2Q9NYU1 1516 aa20.05■□□□□ 0.8
TTC28-203ENST00000442232 ABCC2Q92887 1545 aa20.04■□□□□ 0.8
TTC28-203ENST00000442232 DISP1Q96F81 1524 aa20.04■□□□□ 0.8
TTC28-203ENST00000442232 TSPOAP1O95153 1857 aa20.03■□□□□ 0.8
TTC28-203ENST00000442232 KIAA0556O60303 1618 aa20.02■□□□□ 0.8
TTC28-203ENST00000442232 UHRF1BP1LA0JNW5 1464 aa20■□□□□ 0.79
TTC28-203ENST00000442232 UACAQ9BZF9 1416 aa20■□□□□ 0.79
TTC28-203ENST00000442232 PLB1Q6P1J6 1458 aa19.98■□□□□ 0.79
TTC28-203ENST00000442232 ASXL2Q76L83 1435 aa19.96■□□□□ 0.79
TTC28-203ENST00000442232 KDM6BO15054 1643 aa19.96■□□□□ 0.79
TTC28-203ENST00000442232 GOLGA3Q08378 1498 aa19.96■□□□□ 0.79
TTC28-203ENST00000442232 ZCCHC11Q5TAX3 1644 aaKnown RBP19.92■□□□□ 0.78
TTC28-203ENST00000442232 PRXQ9BXM0 1461 aa19.92■□□□□ 0.78
TTC28-203ENST00000442232 KDM5BQ9UGL1 1544 aa19.91■□□□□ 0.78
TTC28-203ENST00000442232 GLI2P10070 1586 aa19.91■□□□□ 0.78
TTC28-203ENST00000442232 FAM9AQ8IZU1 332 aaPredicted RBP19.85■□□□□ 0.77
TTC28-203ENST00000442232 EPRSP07814 1512 aaKnown RBP19.83■□□□□ 0.77
TTC28-203ENST00000442232 PPRC1Q5VV67 1664 aaKnown RBP19.83■□□□□ 0.76
TTC28-203ENST00000442232 MAP3K4Q9Y6R4 1608 aa19.81■□□□□ 0.76
TTC28-203ENST00000442232 WDR7Q9Y4E6 1490 aa19.8■□□□□ 0.76
TTC28-203ENST00000442232 ABCA8O94911 1581 aa19.8■□□□□ 0.76
TTC28-203ENST00000442232 EEA1Q15075 1411 aa19.8■□□□□ 0.76
TTC28-203ENST00000442232 TEX14Q8IWB6 1497 aa19.79■□□□□ 0.76
TTC28-203ENST00000442232 CSRNP3Q8WYN3 585 aa19.79■□□□□ 0.76
TTC28-203ENST00000442232 CFAP43Q8NDM7 1665 aa19.73■□□□□ 0.75
TTC28-203ENST00000442232 SAMD9Q5K651 1589 aa19.72■□□□□ 0.75
TTC28-203ENST00000442232 P3H3Q8IVL6 736 aa19.7■□□□□ 0.74
TTC28-203ENST00000442232 KCNH8Q96L42 1107 aa19.66■□□□□ 0.74
TTC28-203ENST00000442232 RAPGEF6Q8TEU7 1601 aa19.65■□□□□ 0.74
TTC28-203ENST00000442232 CD109Q6YHK3 1445 aa19.65■□□□□ 0.74
TTC28-203ENST00000442232 KIF21BO75037 1637 aa19.64■□□□□ 0.73
TTC28-203ENST00000442232 MAGI3Q5TCQ9 1506 aa19.63■□□□□ 0.73
TTC28-203ENST00000442232 ARID3CA6NKF2 412 aa19.62■□□□□ 0.73
TTC28-203ENST00000442232 RANGAP1P46060 587 aaPredicted RBP19.61■□□□□ 0.73
TTC28-203ENST00000442232 ATP10BO94823 1461 aa19.6■□□□□ 0.73
TTC28-203ENST00000442232 COL17A1Q9UMD9 1497 aaPredicted RBP19.6■□□□□ 0.73
TTC28-203ENST00000442232 KDM4FA0A1W2PPD8 638 aa19.58■□□□□ 0.72
TTC28-203ENST00000442232 EFCAB5A4FU69 1503 aa19.57■□□□□ 0.72
TTC28-203ENST00000442232 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.57■□□□□ 0.72
TTC28-203ENST00000442232 HNRNPUL2Q1KMD3 747 aaKnown RBP19.57■□□□□ 0.72
TTC28-203ENST00000442232 FHOD3Q2V2M9 1422 aa19.57■□□□□ 0.72
TTC28-203ENST00000442232 ADGRL1O94910 1474 aa19.55■□□□□ 0.72
TTC28-203ENST00000442232 ABCA9Q8IUA7 1624 aa19.54■□□□□ 0.72
TTC28-203ENST00000442232 NUP153P49790 1475 aaKnown RBP19.52■□□□□ 0.72
TTC28-203ENST00000442232 UBTFP17480 764 aaKnown RBP19.47■□□□□ 0.71
TTC28-203ENST00000442232 ARAP3Q8WWN8 1544 aa19.46■□□□□ 0.71
TTC28-203ENST00000442232 PHLDB1Q86UU1 1377 aa19.46■□□□□ 0.71
TTC28-203ENST00000442232 CHIC1Q5VXU3 224 aa19.46■□□□□ 0.71
TTC28-203ENST00000442232 EHMT2Q96KQ7 1210 aa19.45■□□□□ 0.7
TTC28-203ENST00000442232 NEO1Q92859 1461 aa19.44■□□□□ 0.7
TTC28-203ENST00000442232 PLEKHD1A6NEE1 506 aa19.44■□□□□ 0.7
TTC28-203ENST00000442232 CFAP74Q9C0B2 1584 aa19.41■□□□□ 0.7
TTC28-203ENST00000442232 HECW1Q76N89 1606 aa19.4■□□□□ 0.7
TTC28-203ENST00000442232 FMN1Q68DA7 1419 aa19.39■□□□□ 0.69
TTC28-203ENST00000442232 CDK13Q14004 1512 aaKnown RBP19.36■□□□□ 0.69
TTC28-203ENST00000442232 ATP1B4Q9UN42 357 aaPredicted RBP19.34■□□□□ 0.69
TTC28-203ENST00000442232 TTC37Q6PGP7 1564 aa19.34■□□□□ 0.69
TTC28-203ENST00000442232 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.34■□□□□ 0.69
TTC28-203ENST00000442232 ARHGAP35Q9NRY4 1499 aa19.34■□□□□ 0.69
TTC28-203ENST00000442232 RAPGEF3O95398 923 aa19.32■□□□□ 0.68
TTC28-203ENST00000442232 FRMPD1Q5SYB0 1578 aa19.32■□□□□ 0.68
TTC28-203ENST00000442232 FANCAO15360 1455 aa19.31■□□□□ 0.68
TTC28-203ENST00000442232 DENND4BO75064 1496 aaPredicted RBP19.3■□□□□ 0.68
TTC28-203ENST00000442232 RICTORQ6R327 1708 aa19.29■□□□□ 0.68
TTC28-203ENST00000442232 AKNAQ7Z591 1439 aa19.29■□□□□ 0.68
TTC28-203ENST00000442232 CDK11AQ9UQ88 783 aaPredicted RBP19.29■□□□□ 0.68
TTC28-203ENST00000442232 ARHGEF40Q8TER5 1519 aa19.27■□□□□ 0.68
TTC28-203ENST00000442232 MYO5CQ9NQX4 1742 aa19.27■□□□□ 0.68
TTC28-203ENST00000442232 HECW2Q9P2P5 1572 aa19.26■□□□□ 0.67
TTC28-203ENST00000442232 KIF14Q15058 1648 aa19.25■□□□□ 0.67
TTC28-203ENST00000442232 ARID4BQ4LE39 1312 aaPredicted RBP19.25■□□□□ 0.67
TTC28-203ENST00000442232 CLIP1P30622 1438 aa19.24■□□□□ 0.67
TTC28-203ENST00000442232 ADAMTSL3P82987 1691 aa19.23■□□□□ 0.67
TTC28-203ENST00000442232 BCORL1Q5H9F3 1711 aa19.22■□□□□ 0.67
TTC28-203ENST00000442232 ZMYM4Q5VZL5 1548 aa19.21■□□□□ 0.67
TTC28-203ENST00000442232 LRRIQ1Q96JM4 1722 aa19.2■□□□□ 0.66
TTC28-203ENST00000442232 PLCH2O75038 1416 aa19.2■□□□□ 0.66
TTC28-203ENST00000442232 ZFYVE16Q7Z3T8 1539 aa19.2■□□□□ 0.66
TTC28-203ENST00000442232 TROQ12816 1431 aaPredicted RBP19.19■□□□□ 0.66
TTC28-203ENST00000442232 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
TTC28-203ENST00000442232 CCDC18Q5T9S5 1454 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms