RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 PRG4Q92954 1404 aaPredicted RBP34.03■■■■□ 3.04
SHROOM1-204ENST00000440118 JPH4Q96JJ6 628 aa33.99■■■■□ 3.03
SHROOM1-204ENST00000440118 CARMIL1Q5VZK9 1371 aa33.97■■■■□ 3.03
SHROOM1-204ENST00000440118 KIAA0586Q9BVV6 1533 aa33.93■■■■□ 3.02
SHROOM1-204ENST00000440118 IQGAP2Q13576 1575 aa33.77■■■■□ 3
SHROOM1-204ENST00000440118 RAPGEF2Q9Y4G8 1499 aa33.75■■■□□ 2.99
SHROOM1-204ENST00000440118 CARMIL2Q6F5E8 1435 aa33.66■■■□□ 2.98
SHROOM1-204ENST00000440118 ADCY10Q96PN6 1610 aa33.62■■■□□ 2.97
SHROOM1-204ENST00000440118 NPM1P06748 294 aaKnown RBP eCLIP33.61■■■□□ 2.97
SHROOM1-204ENST00000440118 TTBK1Q5TCY1 1321 aaPredicted RBP33.59■■■□□ 2.97
SHROOM1-204ENST00000440118 CTTNBP2Q8WZ74 1663 aa33.59■■■□□ 2.97
SHROOM1-204ENST00000440118 PTPRGP23470 1445 aa33.55■■■□□ 2.96
SHROOM1-204ENST00000440118 TNIKQ9UKE5 1360 aa33.53■■■□□ 2.96
SHROOM1-204ENST00000440118 KIF13AQ9H1H9 1805 aa33.52■■■□□ 2.96
SHROOM1-204ENST00000440118 UGGT2Q9NYU1 1516 aa33.48■■■□□ 2.95
SHROOM1-204ENST00000440118 MAPKBP1O60336 1514 aa33.48■■■□□ 2.95
SHROOM1-204ENST00000440118 DISP1Q96F81 1524 aa33.45■■■□□ 2.95
SHROOM1-204ENST00000440118 KIAA0556O60303 1618 aa33.44■■■□□ 2.94
SHROOM1-204ENST00000440118 PRXQ9BXM0 1461 aa33.44■■■□□ 2.94
SHROOM1-204ENST00000440118 ABCC10Q5T3U5 1492 aa33.36■■■□□ 2.93
SHROOM1-204ENST00000440118 DIP2BQ9P265 1576 aa33.35■■■□□ 2.93
SHROOM1-204ENST00000440118 FAM69CQ0P6D2 419 aa33.33■■■□□ 2.93
SHROOM1-204ENST00000440118 ABCC2Q92887 1545 aa33.33■■■□□ 2.93
SHROOM1-204ENST00000440118 GOLGA3Q08378 1498 aa33.32■■■□□ 2.92
SHROOM1-204ENST00000440118 EEA1Q15075 1411 aa33.31■■■□□ 2.92
SHROOM1-204ENST00000440118 UACAQ9BZF9 1416 aa33.31■■■□□ 2.92
SHROOM1-204ENST00000440118 CSRNP3Q8WYN3 585 aa33.3■■■□□ 2.92
SHROOM1-204ENST00000440118 UHRF1BP1LA0JNW5 1464 aa33.28■■■□□ 2.92
SHROOM1-204ENST00000440118 TSPOAP1O95153 1857 aa33.22■■■□□ 2.91
SHROOM1-204ENST00000440118 FAM9AQ8IZU1 332 aaPredicted RBP33.19■■■□□ 2.9
SHROOM1-204ENST00000440118 ASXL2Q76L83 1435 aa33.17■■■□□ 2.9
SHROOM1-204ENST00000440118 ZCCHC11Q5TAX3 1644 aaKnown RBP33.17■■■□□ 2.9
SHROOM1-204ENST00000440118 PLB1Q6P1J6 1458 aa33.16■■■□□ 2.9
SHROOM1-204ENST00000440118 KDM5BQ9UGL1 1544 aa33.12■■■□□ 2.89
SHROOM1-204ENST00000440118 KIF21BO75037 1637 aa33.05■■■□□ 2.88
SHROOM1-204ENST00000440118 ABCA8O94911 1581 aa33.04■■■□□ 2.88
SHROOM1-204ENST00000440118 GLI2P10070 1586 aa33.02■■■□□ 2.88
SHROOM1-204ENST00000440118 SAMD9Q5K651 1589 aa33.02■■■□□ 2.88
SHROOM1-204ENST00000440118 CHIC1Q5VXU3 224 aa33.02■■■□□ 2.88
SHROOM1-204ENST00000440118 KDM6BO15054 1643 aa33.02■■■□□ 2.88
SHROOM1-204ENST00000440118 P3H3Q8IVL6 736 aa33.01■■■□□ 2.87
SHROOM1-204ENST00000440118 RANGAP1P46060 587 aaPredicted RBP32.97■■■□□ 2.87
SHROOM1-204ENST00000440118 EPRSP07814 1512 aaKnown RBP32.97■■■□□ 2.87
SHROOM1-204ENST00000440118 WDR7Q9Y4E6 1490 aa32.94■■■□□ 2.86
SHROOM1-204ENST00000440118 MAP3K4Q9Y6R4 1608 aa32.91■■■□□ 2.86
SHROOM1-204ENST00000440118 PPRC1Q5VV67 1664 aaKnown RBP32.91■■■□□ 2.86
SHROOM1-204ENST00000440118 RAPGEF6Q8TEU7 1601 aa32.86■■■□□ 2.85
SHROOM1-204ENST00000440118 EHMT2Q96KQ7 1210 aa32.85■■■□□ 2.85
SHROOM1-204ENST00000440118 ARID3CA6NKF2 412 aa32.84■■■□□ 2.85
SHROOM1-204ENST00000440118 AEBP2Q6ZN18 517 aaPredicted RBP32.82■■■□□ 2.84
SHROOM1-204ENST00000440118 EFCAB5A4FU69 1503 aa32.82■■■□□ 2.84
SHROOM1-204ENST00000440118 TEX14Q8IWB6 1497 aa32.81■■■□□ 2.84
SHROOM1-204ENST00000440118 FHOD3Q2V2M9 1422 aa32.81■■■□□ 2.84
SHROOM1-204ENST00000440118 UBTFP17480 764 aaKnown RBP32.79■■■□□ 2.84
SHROOM1-204ENST00000440118 CFAP43Q8NDM7 1665 aa32.78■■■□□ 2.84
SHROOM1-204ENST00000440118 KCNH8Q96L42 1107 aa32.77■■■□□ 2.84
SHROOM1-204ENST00000440118 ATP10BO94823 1461 aa32.73■■■□□ 2.83
SHROOM1-204ENST00000440118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.71■■■□□ 2.83
SHROOM1-204ENST00000440118 HNRNPUL2Q1KMD3 747 aaKnown RBP32.71■■■□□ 2.83
SHROOM1-204ENST00000440118 CD109Q6YHK3 1445 aa32.68■■■□□ 2.82
SHROOM1-204ENST00000440118 NUP153P49790 1475 aaKnown RBP32.65■■■□□ 2.82
SHROOM1-204ENST00000440118 MAGI3Q5TCQ9 1506 aa32.61■■■□□ 2.81
SHROOM1-204ENST00000440118 ABCA9Q8IUA7 1624 aa32.55■■■□□ 2.8
SHROOM1-204ENST00000440118 COL17A1Q9UMD9 1497 aaPredicted RBP32.53■■■□□ 2.8
SHROOM1-204ENST00000440118 FMN1Q68DA7 1419 aa32.5■■■□□ 2.79
SHROOM1-204ENST00000440118 ARHGAP35Q9NRY4 1499 aa32.49■■■□□ 2.79
SHROOM1-204ENST00000440118 HECW1Q76N89 1606 aa32.48■■■□□ 2.79
SHROOM1-204ENST00000440118 PLEKHD1A6NEE1 506 aa32.45■■■□□ 2.79
SHROOM1-204ENST00000440118 ATP1B4Q9UN42 357 aaPredicted RBP32.44■■■□□ 2.78
SHROOM1-204ENST00000440118 CDK13Q14004 1512 aaKnown RBP32.42■■■□□ 2.78
SHROOM1-204ENST00000440118 ARAP3Q8WWN8 1544 aa32.33■■■□□ 2.77
SHROOM1-204ENST00000440118 NEO1Q92859 1461 aa32.32■■■□□ 2.76
SHROOM1-204ENST00000440118 PHLDB1Q86UU1 1377 aa32.32■■■□□ 2.76
SHROOM1-204ENST00000440118 TTC37Q6PGP7 1564 aa32.29■■■□□ 2.76
SHROOM1-204ENST00000440118 CFAP74Q9C0B2 1584 aa32.29■■■□□ 2.76
SHROOM1-204ENST00000440118 KDM4FA0A1W2PPD8 638 aa32.29■■■□□ 2.76
SHROOM1-204ENST00000440118 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP32.29■■■□□ 2.763e-8■■■□□ 17.7
SHROOM1-204ENST00000440118 ADGRL1O94910 1474 aa32.29■■■□□ 2.76
SHROOM1-204ENST00000440118 CDK11AQ9UQ88 783 aaPredicted RBP32.24■■■□□ 2.75
SHROOM1-204ENST00000440118 PCF11O94913 1555 aaKnown RBP32.24■■■□□ 2.75
SHROOM1-204ENST00000440118 LRRIQ1Q96JM4 1722 aa32.23■■■□□ 2.75
SHROOM1-204ENST00000440118 FANCAO15360 1455 aa32.2■■■□□ 2.75
SHROOM1-204ENST00000440118 KIF14Q15058 1648 aa32.19■■■□□ 2.74
SHROOM1-204ENST00000440118 CLIP1P30622 1438 aa32.19■■■□□ 2.74
SHROOM1-204ENST00000440118 MYO5CQ9NQX4 1742 aa32.17■■■□□ 2.74
SHROOM1-204ENST00000440118 CASKIN1Q8WXD9 1431 aa32.15■■■□□ 2.74
SHROOM1-204ENST00000440118 RAPGEF3O95398 923 aa32.14■■■□□ 2.74
SHROOM1-204ENST00000440118 CCDC18Q5T9S5 1454 aa32.14■■■□□ 2.74
SHROOM1-204ENST00000440118 FRMPD1Q5SYB0 1578 aa32.13■■■□□ 2.73
SHROOM1-204ENST00000440118 AKNAQ7Z591 1439 aa32.13■■■□□ 2.73
SHROOM1-204ENST00000440118 TROQ12816 1431 aaPredicted RBP32.11■■■□□ 2.73
SHROOM1-204ENST00000440118 DENND4BO75064 1496 aaPredicted RBP32.1■■■□□ 2.73
SHROOM1-204ENST00000440118 RICTORQ6R327 1708 aa32.1■■■□□ 2.73
SHROOM1-204ENST00000440118 FYCO1Q9BQS8 1478 aa32.1■■■□□ 2.73
SHROOM1-204ENST00000440118 PLCH2O75038 1416 aa32.05■■■□□ 2.72
SHROOM1-204ENST00000440118 ARHGEF40Q8TER5 1519 aa32.01■■■□□ 2.72
SHROOM1-204ENST00000440118 ARHGAP5Q13017 1502 aa32■■■□□ 2.71
SHROOM1-204ENST00000440118 EFCAB2Q5VUJ9 269 aa31.96■■■□□ 2.71
SHROOM1-204ENST00000440118 ZMYM4Q5VZL5 1548 aa31.95■■■□□ 2.71
SHROOM1-204ENST00000440118 SCAPERQ9BY12 1400 aa31.94■■■□□ 2.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms