RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
UBE2F-213ENST00000439780 SHROOM2Q13796 1616 aa17.55■□□□□ 0.4
UBE2F-213ENST00000439780 ERCC6L2Q5T890 1561 aa17.55■□□□□ 0.4
UBE2F-213ENST00000439780 FAM9AQ8IZU1 332 aaPredicted RBP17.55■□□□□ 0.4
UBE2F-213ENST00000439780 JPH4Q96JJ6 628 aa17.55■□□□□ 0.4
UBE2F-213ENST00000439780 KIAA0586Q9BVV6 1533 aa17.54■□□□□ 0.4
UBE2F-213ENST00000439780 CYB5RLQ6IPT4 315 aa17.53■□□□□ 0.4
UBE2F-213ENST00000439780 EEA1Q15075 1411 aa17.52■□□□□ 0.4
UBE2F-213ENST00000439780 PRG4Q92954 1404 aaPredicted RBP17.5■□□□□ 0.39
UBE2F-213ENST00000439780 IQGAP2Q13576 1575 aa17.43■□□□□ 0.38
UBE2F-213ENST00000439780 CTTNBP2Q8WZ74 1663 aa17.37■□□□□ 0.37
UBE2F-213ENST00000439780 DISP1Q96F81 1524 aa17.36■□□□□ 0.37
UBE2F-213ENST00000439780 UGGT2Q9NYU1 1516 aa17.36■□□□□ 0.37
UBE2F-213ENST00000439780 KIF21BO75037 1637 aa17.36■□□□□ 0.37
UBE2F-213ENST00000439780 EHMT2Q96KQ7 1210 aa17.34■□□□□ 0.37
UBE2F-213ENST00000439780 CARMIL2Q6F5E8 1435 aa17.32■□□□□ 0.36
UBE2F-213ENST00000439780 TNIKQ9UKE5 1360 aa17.29■□□□□ 0.36
UBE2F-213ENST00000439780 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
UBE2F-213ENST00000439780 PTPRGP23470 1445 aa17.29■□□□□ 0.36
UBE2F-213ENST00000439780 KIAA0556O60303 1618 aa17.28■□□□□ 0.36
UBE2F-213ENST00000439780 GOLGA3Q08378 1498 aa17.25■□□□□ 0.35
UBE2F-213ENST00000439780 UBTFP17480 764 aaKnown RBP17.24■□□□□ 0.35
UBE2F-213ENST00000439780 RANGAP1P46060 587 aaPredicted RBP17.23■□□□□ 0.35
UBE2F-213ENST00000439780 P3H3Q8IVL6 736 aa17.22■□□□□ 0.35
UBE2F-213ENST00000439780 ADCY10Q96PN6 1610 aa17.21■□□□□ 0.35
UBE2F-213ENST00000439780 SAMD9Q5K651 1589 aa17.19■□□□□ 0.34
UBE2F-213ENST00000439780 UACAQ9BZF9 1416 aa17.17■□□□□ 0.34
UBE2F-213ENST00000439780 UHRF1BP1LA0JNW5 1464 aa17.14■□□□□ 0.33
UBE2F-213ENST00000439780 PLB1Q6P1J6 1458 aa17.14■□□□□ 0.33
UBE2F-213ENST00000439780 TRHP20396 242 aaPredicted RBP17.13■□□□□ 0.33
UBE2F-213ENST00000439780 ABCC2Q92887 1545 aa17.12■□□□□ 0.33
UBE2F-213ENST00000439780 NPM1P06748 294 aaKnown RBP eCLIP17.12■□□□□ 0.33
UBE2F-213ENST00000439780 FHOD3Q2V2M9 1422 aa17.12■□□□□ 0.33
UBE2F-213ENST00000439780 ABCA8O94911 1581 aa17.11■□□□□ 0.33
UBE2F-213ENST00000439780 EFCAB5A4FU69 1503 aa17.09■□□□□ 0.33
UBE2F-213ENST00000439780 ARHGAP35Q9NRY4 1499 aa17.08■□□□□ 0.32
UBE2F-213ENST00000439780 KDM5BQ9UGL1 1544 aa17.07■□□□□ 0.32
UBE2F-213ENST00000439780 MAPKBP1O60336 1514 aa17.06■□□□□ 0.32
UBE2F-213ENST00000439780 LOC105371045A0A1W2PR82 267 aa17.06■□□□□ 0.32
UBE2F-213ENST00000439780 ZCCHC11Q5TAX3 1644 aaKnown RBP17.03■□□□□ 0.32
UBE2F-213ENST00000439780 ARID3CA6NKF2 412 aa17.01■□□□□ 0.31
UBE2F-213ENST00000439780 ASXL2Q76L83 1435 aa17.01■□□□□ 0.31
UBE2F-213ENST00000439780 ABCC10Q5T3U5 1492 aa17■□□□□ 0.31
UBE2F-213ENST00000439780 RAPGEF6Q8TEU7 1601 aa17■□□□□ 0.31
UBE2F-213ENST00000439780 ATP10BO94823 1461 aa16.99■□□□□ 0.31
UBE2F-213ENST00000439780 KIF13AQ9H1H9 1805 aa16.98■□□□□ 0.31
UBE2F-213ENST00000439780 FAM69CQ0P6D2 419 aa16.98■□□□□ 0.31
UBE2F-213ENST00000439780 NUP153P49790 1475 aaKnown RBP16.98■□□□□ 0.31
UBE2F-213ENST00000439780 CLIP1P30622 1438 aa16.97■□□□□ 0.31
UBE2F-213ENST00000439780 DIP2BQ9P265 1576 aa16.97■□□□□ 0.31
UBE2F-213ENST00000439780 FMN1Q68DA7 1419 aa16.94■□□□□ 0.3
UBE2F-213ENST00000439780 WDR7Q9Y4E6 1490 aa16.92■□□□□ 0.3
UBE2F-213ENST00000439780 EPRSP07814 1512 aaKnown RBP16.91■□□□□ 0.3
UBE2F-213ENST00000439780 CEP162Q5TB80 1403 aa16.91■□□□□ 0.3
UBE2F-213ENST00000439780 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.88■□□□□ 0.29
UBE2F-213ENST00000439780 HNRNPUL2Q1KMD3 747 aaKnown RBP16.88■□□□□ 0.29
UBE2F-213ENST00000439780 KCNH8Q96L42 1107 aa16.88■□□□□ 0.29
UBE2F-213ENST00000439780 ATP1B4Q9UN42 357 aaPredicted RBP16.88■□□□□ 0.29
UBE2F-213ENST00000439780 GLI2P10070 1586 aa16.88■□□□□ 0.29
UBE2F-213ENST00000439780 CDK13Q14004 1512 aaKnown RBP16.87■□□□□ 0.29
UBE2F-213ENST00000439780 HECW1Q76N89 1606 aa16.85■□□□□ 0.29
UBE2F-213ENST00000439780 CASKIN1Q8WXD9 1431 aa16.84■□□□□ 0.29
UBE2F-213ENST00000439780 PCF11O94913 1555 aaKnown RBP16.84■□□□□ 0.29
UBE2F-213ENST00000439780 TSPOAP1O95153 1857 aa16.82■□□□□ 0.28
UBE2F-213ENST00000439780 LRRIQ1Q96JM4 1722 aa16.82■□□□□ 0.28
UBE2F-213ENST00000439780 PLEKHD1A6NEE1 506 aa16.81■□□□□ 0.28
UBE2F-213ENST00000439780 MAP3K4Q9Y6R4 1608 aa16.81■□□□□ 0.28
UBE2F-213ENST00000439780 PPRC1Q5VV67 1664 aaKnown RBP16.8■□□□□ 0.28
UBE2F-213ENST00000439780 FYCO1Q9BQS8 1478 aa16.79■□□□□ 0.28
UBE2F-213ENST00000439780 CD109Q6YHK3 1445 aa16.77■□□□□ 0.27
UBE2F-213ENST00000439780 CFAP43Q8NDM7 1665 aa16.75■□□□□ 0.27
UBE2F-213ENST00000439780 ABCA9Q8IUA7 1624 aa16.74■□□□□ 0.27
UBE2F-213ENST00000439780 CCDC18Q5T9S5 1454 aa16.73■□□□□ 0.27
UBE2F-213ENST00000439780 MAGI3Q5TCQ9 1506 aa16.72■□□□□ 0.27
UBE2F-213ENST00000439780 CDK11AQ9UQ88 783 aaPredicted RBP16.72■□□□□ 0.27
UBE2F-213ENST00000439780 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.71■□□□□ 0.272e-6■■■□□ 16.6
UBE2F-213ENST00000439780 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
UBE2F-213ENST00000439780 VPS8Q8N3P4 1428 aa16.7■□□□□ 0.26
UBE2F-213ENST00000439780 TEX14Q8IWB6 1497 aa16.69■□□□□ 0.26
UBE2F-213ENST00000439780 COL17A1Q9UMD9 1497 aaPredicted RBP16.69■□□□□ 0.26
UBE2F-213ENST00000439780 TTC37Q6PGP7 1564 aa16.68■□□□□ 0.26
UBE2F-213ENST00000439780 KIF14Q15058 1648 aa16.68■□□□□ 0.26
UBE2F-213ENST00000439780 KDM6BO15054 1643 aa16.66■□□□□ 0.26
UBE2F-213ENST00000439780 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
UBE2F-213ENST00000439780 PLCH2O75038 1416 aa16.61■□□□□ 0.25
UBE2F-213ENST00000439780 MTUS2Q5JR59 1369 aa16.59■□□□□ 0.25
UBE2F-213ENST00000439780 NEO1Q92859 1461 aa16.59■□□□□ 0.25
UBE2F-213ENST00000439780 FANCAO15360 1455 aa16.58■□□□□ 0.24
UBE2F-213ENST00000439780 ARAP3Q8WWN8 1544 aa16.58■□□□□ 0.24
UBE2F-213ENST00000439780 TIAM1Q13009 1591 aa16.58■□□□□ 0.24
UBE2F-213ENST00000439780 PHLDB1Q86UU1 1377 aa16.57■□□□□ 0.24
UBE2F-213ENST00000439780 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
UBE2F-213ENST00000439780 MYO5CQ9NQX4 1742 aa16.56■□□□□ 0.24
UBE2F-213ENST00000439780 KANK4Q5T7N3 995 aaPredicted RBP16.55■□□□□ 0.24
UBE2F-213ENST00000439780 RAPGEF3O95398 923 aa16.54■□□□□ 0.24
UBE2F-213ENST00000439780 EFCAB2Q5VUJ9 269 aa16.54■□□□□ 0.24
UBE2F-213ENST00000439780 EHBP1L1Q8N3D4 1523 aa16.54■□□□□ 0.24
UBE2F-213ENST00000439780 MAP3K1Q13233 1512 aa16.53■□□□□ 0.24
UBE2F-213ENST00000439780 CDC42BPBQ9Y5S2 1711 aa16.53■□□□□ 0.24
UBE2F-213ENST00000439780 ARHGAP5Q13017 1502 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms