RNA–Protein interactions for RNA: ENST00000439780.5

UBE2F-213, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 5

Gene UBE2F, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-213ENST00000439780 NISCHQ9Y2I1 1504 aa25.39■■□□□ 1.66
UBE2F-213ENST00000439780 CCDC180Q9P1Z9 1646 aa22.48■■□□□ 1.19
UBE2F-213ENST00000439780 ABCC9O60706 1549 aa22.02■■□□□ 1.12
UBE2F-213ENST00000439780 DCAF8L2P0C7V8 631 aa21.22■□□□□ 0.99
UBE2F-213ENST00000439780 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
UBE2F-213ENST00000439780 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.98
UBE2F-213ENST00000439780 NACADO15069 1562 aa21.14■□□□□ 0.97
UBE2F-213ENST00000439780 MYO15BQ96JP2 1530 aa21.03■□□□□ 0.96
UBE2F-213ENST00000439780 DCAF1Q9Y4B6 1507 aa20.98■□□□□ 0.95
UBE2F-213ENST00000439780 UNC13AQ9UPW8 1703 aa20.7■□□□□ 0.9
UBE2F-213ENST00000439780 PABPN1Q86U42 306 aaKnown RBP eCLIP20.63■□□□□ 0.89
UBE2F-213ENST00000439780 SCRIBQ14160 1630 aa20.57■□□□□ 0.88
UBE2F-213ENST00000439780 BICRAQ9NZM4 1560 aa20.57■□□□□ 0.88
UBE2F-213ENST00000439780 SHROOM4Q9ULL8 1493 aa20.25■□□□□ 0.83
UBE2F-213ENST00000439780 DNAJC5BQ9UF47 199 aa20.24■□□□□ 0.83
UBE2F-213ENST00000439780 EIF4G1Q04637 1599 aaKnown RBP19.99■□□□□ 0.79
UBE2F-213ENST00000439780 CC2D2AQ9P2K1 1620 aa19.9■□□□□ 0.78
UBE2F-213ENST00000439780 CECR2Q9BXF3 1484 aa19.83■□□□□ 0.76
UBE2F-213ENST00000439780 SMARCA4P51532 1647 aa19.67■□□□□ 0.74
UBE2F-213ENST00000439780 BAZ1AQ9NRL2 1556 aaPredicted RBP19.64■□□□□ 0.73
UBE2F-213ENST00000439780 MROH2BQ7Z745 1585 aa19.6■□□□□ 0.73
UBE2F-213ENST00000439780 ATAD2BQ9ULI0 1458 aa19.57■□□□□ 0.72
UBE2F-213ENST00000439780 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
UBE2F-213ENST00000439780 SMARCA2P51531 1590 aa19.49■□□□□ 0.71
UBE2F-213ENST00000439780 PEG3Q9GZU2 1588 aa19.47■□□□□ 0.71
UBE2F-213ENST00000439780 HMGXB3Q12766 1538 aa19.41■□□□□ 0.7
UBE2F-213ENST00000439780 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
UBE2F-213ENST00000439780 BAZ1BQ9UIG0 1483 aaKnown RBP19.38■□□□□ 0.69
UBE2F-213ENST00000439780 WIZO95785 1651 aa19.37■□□□□ 0.69
UBE2F-213ENST00000439780 TOP2AP11388 1531 aaKnown RBP19.14■□□□□ 0.65
UBE2F-213ENST00000439780 NESP48681 1621 aa19.1■□□□□ 0.65
UBE2F-213ENST00000439780 CADPSQ9ULU8 1353 aa18.98■□□□□ 0.63
UBE2F-213ENST00000439780 LAMC3Q9Y6N6 1575 aa18.98■□□□□ 0.63
UBE2F-213ENST00000439780 SUPT5HO00267 1087 aaKnown RBP18.97■□□□□ 0.63
UBE2F-213ENST00000439780 CCDC88BA6NC98 1476 aa18.96■□□□□ 0.63
UBE2F-213ENST00000439780 ERCC6Q03468 1493 aa18.91■□□□□ 0.62
UBE2F-213ENST00000439780 CFTRP13569 1480 aa18.88■□□□□ 0.61
UBE2F-213ENST00000439780 PDS5BQ9NTI5 1447 aa18.85■□□□□ 0.61
UBE2F-213ENST00000439780 KIF21AQ7Z4S6 1674 aa18.82■□□□□ 0.6
UBE2F-213ENST00000439780 FANCD2Q9BXW9 1451 aa18.76■□□□□ 0.59
UBE2F-213ENST00000439780 THOC2Q8NI27 1593 aaKnown RBP18.74■□□□□ 0.59
UBE2F-213ENST00000439780 CEP164Q9UPV0 1460 aa18.7■□□□□ 0.58
UBE2F-213ENST00000439780 CUX2O14529 1486 aa18.69■□□□□ 0.58
UBE2F-213ENST00000439780 MRC2Q9UBG0 1479 aa18.67■□□□□ 0.58
UBE2F-213ENST00000439780 PRDM2Q13029 1718 aa18.67■□□□□ 0.58
UBE2F-213ENST00000439780 WDR62O43379 1518 aa18.6■□□□□ 0.57
UBE2F-213ENST00000439780 URB2Q14146 1524 aaKnown RBP18.59■□□□□ 0.57
UBE2F-213ENST00000439780 TOPBP1Q92547 1522 aa18.47■□□□□ 0.55
UBE2F-213ENST00000439780 DNMBPQ6XZF7 1577 aa18.42■□□□□ 0.54
UBE2F-213ENST00000439780 ABCC8Q09428 1581 aa18.42■□□□□ 0.54
UBE2F-213ENST00000439780 CUX1P39880 1505 aa18.37■□□□□ 0.53
UBE2F-213ENST00000439780 POLA1P09884 1462 aaPredicted RBP18.32■□□□□ 0.52
UBE2F-213ENST00000439780 IFT140Q96RY7 1462 aa18.31■□□□□ 0.52
UBE2F-213ENST00000439780 FGD5Q6ZNL6 1462 aa18.28■□□□□ 0.52
UBE2F-213ENST00000439780 ZNF608Q9ULD9 1512 aaPredicted RBP18.28■□□□□ 0.52
UBE2F-213ENST00000439780 RAD54L2Q9Y4B4 1467 aa18.27■□□□□ 0.52
UBE2F-213ENST00000439780 TARBP1Q13395 1621 aaKnown RBP18.27■□□□□ 0.51
UBE2F-213ENST00000439780 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
UBE2F-213ENST00000439780 SOGA1O94964 1423 aa18.24■□□□□ 0.51
UBE2F-213ENST00000439780 SYNJ1O43426 1573 aa18.22■□□□□ 0.51
UBE2F-213ENST00000439780 TOP2BQ02880 1626 aa18.2■□□□□ 0.5
UBE2F-213ENST00000439780 BIVM-ERCC5R4GMW8 1640 aa18.19■□□□□ 0.5
UBE2F-213ENST00000439780 AQRO60306 1485 aaKnown RBP eCLIP18.19■□□□□ 0.53e-6■■■□□ 18.3
UBE2F-213ENST00000439780 TDRD9Q8NDG6 1382 aaKnown RBP18.17■□□□□ 0.5
UBE2F-213ENST00000439780 EIF4G3O43432 1585 aaKnown RBP18.16■□□□□ 0.5
UBE2F-213ENST00000439780 DNAJC5Q9H3Z4 198 aa18.11■□□□□ 0.49
UBE2F-213ENST00000439780 WDR97A6NE52 1622 aa18.1■□□□□ 0.49
UBE2F-213ENST00000439780 ABCA10Q8WWZ4 1543 aa18.1■□□□□ 0.49
UBE2F-213ENST00000439780 GAPVD1Q14C86 1478 aa18.02■□□□□ 0.48
UBE2F-213ENST00000439780 ABCA5Q8WWZ7 1642 aa18.01■□□□□ 0.47
UBE2F-213ENST00000439780 GRIN2BQ13224 1484 aa18.01■□□□□ 0.47
UBE2F-213ENST00000439780 SNAPC4Q5SXM2 1469 aa17.99■□□□□ 0.47
UBE2F-213ENST00000439780 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
UBE2F-213ENST00000439780 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
UBE2F-213ENST00000439780 FBLN2P98095 1184 aa17.93■□□□□ 0.46
UBE2F-213ENST00000439780 MAGI1Q96QZ7 1491 aaPredicted RBP17.93■□□□□ 0.46
UBE2F-213ENST00000439780 CHD1O14646 1710 aa17.92■□□□□ 0.46
UBE2F-213ENST00000439780 CHMP7Q8WUX9 453 aaPredicted RBP17.88■□□□□ 0.45
UBE2F-213ENST00000439780 SYNJ2O15056 1496 aa17.88■□□□□ 0.45
UBE2F-213ENST00000439780 TRIM41Q8WV44 630 aa17.87■□□□□ 0.45
UBE2F-213ENST00000439780 ERICH3Q5RHP9 1530 aa17.86■□□□□ 0.45
UBE2F-213ENST00000439780 KIF27Q86VH2 1401 aa17.85■□□□□ 0.45
UBE2F-213ENST00000439780 ADAMTS12P58397 1594 aa17.83■□□□□ 0.45
UBE2F-213ENST00000439780 IGF1RP08069 1367 aa17.83■□□□□ 0.45
UBE2F-213ENST00000439780 FHAD1B1AJZ9 1412 aa17.81■□□□□ 0.44
UBE2F-213ENST00000439780 RUSC2Q8N2Y8 1516 aa17.8■□□□□ 0.44
UBE2F-213ENST00000439780 GRIN2AQ12879 1464 aa17.78■□□□□ 0.44
UBE2F-213ENST00000439780 CHIC1Q5VXU3 224 aa17.76■□□□□ 0.43
UBE2F-213ENST00000439780 CLASP1Q7Z460 1538 aa17.74■□□□□ 0.43
UBE2F-213ENST00000439780 NUP160Q12769 1436 aa17.71■□□□□ 0.43
UBE2F-213ENST00000439780 CEP170Q5SW79 1584 aa17.7■□□□□ 0.42
UBE2F-213ENST00000439780 CARMIL1Q5VZK9 1371 aa17.69■□□□□ 0.42
UBE2F-213ENST00000439780 CUL7Q14999 1698 aa17.68■□□□□ 0.42
UBE2F-213ENST00000439780 RIMBP3CA6NJZ7 1639 aa17.67■□□□□ 0.42
UBE2F-213ENST00000439780 RIMBP3BA6NNM3 1639 aa17.67■□□□□ 0.42
UBE2F-213ENST00000439780 RIMBP3Q9UFD9 1639 aa17.67■□□□□ 0.42
UBE2F-213ENST00000439780 ARHGEF11O15085 1522 aa17.67■□□□□ 0.42
UBE2F-213ENST00000439780 RAPGEF2Q9Y4G8 1499 aa17.57■□□□□ 0.4
UBE2F-213ENST00000439780 CSRNP3Q8WYN3 585 aa17.56■□□□□ 0.4
UBE2F-213ENST00000439780 ARAP1Q96P48 1450 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms