RNA–Protein interactions for RNA: ENST00000439775.1

SNRPD3-204, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 3

Gene SNRPD3, Length 640 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-204ENST00000439775 PRG4Q92954 1404 aaPredicted RBP28.22■■■□□ 2.11
SNRPD3-204ENST00000439775 JPH4Q96JJ6 628 aa28.2■■■□□ 2.1
SNRPD3-204ENST00000439775 KIAA0586Q9BVV6 1533 aa28.15■■■□□ 2.1
SNRPD3-204ENST00000439775 CARMIL1Q5VZK9 1371 aa28.11■■■□□ 2.09
SNRPD3-204ENST00000439775 IQGAP2Q13576 1575 aa27.92■■■□□ 2.06
SNRPD3-204ENST00000439775 RAPGEF2Q9Y4G8 1499 aa27.91■■■□□ 2.06
SNRPD3-204ENST00000439775 ADCY10Q96PN6 1610 aa27.89■■■□□ 2.05
SNRPD3-204ENST00000439775 CARMIL2Q6F5E8 1435 aa27.85■■■□□ 2.05
SNRPD3-204ENST00000439775 MAPKBP1O60336 1514 aa27.85■■■□□ 2.05
SNRPD3-204ENST00000439775 PTPRGP23470 1445 aa27.81■■■□□ 2.04
SNRPD3-204ENST00000439775 NPM1P06748 294 aaKnown RBP eCLIP27.8■■■□□ 2.04
SNRPD3-204ENST00000439775 TNIKQ9UKE5 1360 aa27.8■■■□□ 2.04
SNRPD3-204ENST00000439775 KIF13AQ9H1H9 1805 aa27.79■■■□□ 2.04
SNRPD3-204ENST00000439775 DISP1Q96F81 1524 aa27.77■■■□□ 2.04
SNRPD3-204ENST00000439775 UGGT2Q9NYU1 1516 aa27.77■■■□□ 2.04
SNRPD3-204ENST00000439775 ABCC10Q5T3U5 1492 aa27.76■■■□□ 2.04
SNRPD3-204ENST00000439775 PRXQ9BXM0 1461 aa27.7■■■□□ 2.03
SNRPD3-204ENST00000439775 DIP2BQ9P265 1576 aa27.7■■■□□ 2.03
SNRPD3-204ENST00000439775 ABCC2Q92887 1545 aa27.67■■■□□ 2.02
SNRPD3-204ENST00000439775 KIAA0556O60303 1618 aa27.67■■■□□ 2.02
SNRPD3-204ENST00000439775 CTTNBP2Q8WZ74 1663 aa27.66■■■□□ 2.02
SNRPD3-204ENST00000439775 UHRF1BP1LA0JNW5 1464 aa27.66■■■□□ 2.02
SNRPD3-204ENST00000439775 FAM69CQ0P6D2 419 aa27.65■■■□□ 2.02
SNRPD3-204ENST00000439775 TTBK1Q5TCY1 1321 aaPredicted RBP27.63■■■□□ 2.01
SNRPD3-204ENST00000439775 UACAQ9BZF9 1416 aa27.62■■■□□ 2.01
SNRPD3-204ENST00000439775 GOLGA3Q08378 1498 aa27.56■■■□□ 2
SNRPD3-204ENST00000439775 KDM5BQ9UGL1 1544 aa27.53■■■□□ 2
SNRPD3-204ENST00000439775 PLB1Q6P1J6 1458 aa27.53■■■□□ 2
SNRPD3-204ENST00000439775 ASXL2Q76L83 1435 aa27.52■■■□□ 2
SNRPD3-204ENST00000439775 EEA1Q15075 1411 aa27.5■■□□□ 1.99
SNRPD3-204ENST00000439775 CSRNP3Q8WYN3 585 aa27.48■■□□□ 1.99
SNRPD3-204ENST00000439775 GLI2P10070 1586 aa27.46■■□□□ 1.99
SNRPD3-204ENST00000439775 ZCCHC11Q5TAX3 1644 aaKnown RBP27.44■■□□□ 1.98
SNRPD3-204ENST00000439775 ABCA8O94911 1581 aa27.39■■□□□ 1.98
SNRPD3-204ENST00000439775 TSPOAP1O95153 1857 aa27.38■■□□□ 1.97
SNRPD3-204ENST00000439775 KDM6BO15054 1643 aa27.38■■□□□ 1.97
SNRPD3-204ENST00000439775 EPRSP07814 1512 aaKnown RBP27.37■■□□□ 1.97
SNRPD3-204ENST00000439775 PPRC1Q5VV67 1664 aaKnown RBP27.33■■□□□ 1.97
SNRPD3-204ENST00000439775 WDR7Q9Y4E6 1490 aa27.32■■□□□ 1.96
SNRPD3-204ENST00000439775 SAMD9Q5K651 1589 aa27.31■■□□□ 1.96
SNRPD3-204ENST00000439775 MAP3K4Q9Y6R4 1608 aa27.3■■□□□ 1.96
SNRPD3-204ENST00000439775 AEBP2Q6ZN18 517 aaPredicted RBP27.26■■□□□ 1.95
SNRPD3-204ENST00000439775 KIF21BO75037 1637 aa27.25■■□□□ 1.95
SNRPD3-204ENST00000439775 TEX14Q8IWB6 1497 aa27.22■■□□□ 1.95
SNRPD3-204ENST00000439775 FAM9AQ8IZU1 332 aaPredicted RBP27.22■■□□□ 1.95
SNRPD3-204ENST00000439775 P3H3Q8IVL6 736 aa27.2■■□□□ 1.94
SNRPD3-204ENST00000439775 CHIC1Q5VXU3 224 aa27.16■■□□□ 1.94
SNRPD3-204ENST00000439775 CFAP43Q8NDM7 1665 aa27.14■■□□□ 1.93
SNRPD3-204ENST00000439775 ATP10BO94823 1461 aa27.13■■□□□ 1.93
SNRPD3-204ENST00000439775 RAPGEF6Q8TEU7 1601 aa27.13■■□□□ 1.93
SNRPD3-204ENST00000439775 EFCAB5A4FU69 1503 aa27.11■■□□□ 1.93
SNRPD3-204ENST00000439775 MAGI3Q5TCQ9 1506 aa27.11■■□□□ 1.93
SNRPD3-204ENST00000439775 COL17A1Q9UMD9 1497 aaPredicted RBP27.1■■□□□ 1.93
SNRPD3-204ENST00000439775 CD109Q6YHK3 1445 aa27.09■■□□□ 1.93
SNRPD3-204ENST00000439775 FHOD3Q2V2M9 1422 aa27.08■■□□□ 1.93
SNRPD3-204ENST00000439775 KCNH8Q96L42 1107 aa27.06■■□□□ 1.92
SNRPD3-204ENST00000439775 NUP153P49790 1475 aaKnown RBP27.05■■□□□ 1.92
SNRPD3-204ENST00000439775 ARID3CA6NKF2 412 aa27.03■■□□□ 1.92
SNRPD3-204ENST00000439775 RANGAP1P46060 587 aaPredicted RBP27.03■■□□□ 1.92
SNRPD3-204ENST00000439775 ABCA9Q8IUA7 1624 aa26.99■■□□□ 1.91
SNRPD3-204ENST00000439775 KDM4FA0A1W2PPD8 638 aa26.95■■□□□ 1.9
SNRPD3-204ENST00000439775 UBTFP17480 764 aaKnown RBP26.92■■□□□ 1.9
SNRPD3-204ENST00000439775 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.9■■□□□ 1.9
SNRPD3-204ENST00000439775 HNRNPUL2Q1KMD3 747 aaKnown RBP26.9■■□□□ 1.9
SNRPD3-204ENST00000439775 ARAP3Q8WWN8 1544 aa26.89■■□□□ 1.89
SNRPD3-204ENST00000439775 PHLDB1Q86UU1 1377 aa26.87■■□□□ 1.89
SNRPD3-204ENST00000439775 ARHGAP35Q9NRY4 1499 aa26.86■■□□□ 1.89
SNRPD3-204ENST00000439775 FMN1Q68DA7 1419 aa26.84■■□□□ 1.89
SNRPD3-204ENST00000439775 EHMT2Q96KQ7 1210 aa26.84■■□□□ 1.89
SNRPD3-204ENST00000439775 ADGRL1O94910 1474 aa26.84■■□□□ 1.89
SNRPD3-204ENST00000439775 NEO1Q92859 1461 aa26.83■■□□□ 1.89
SNRPD3-204ENST00000439775 PLEKHD1A6NEE1 506 aa26.82■■□□□ 1.88
SNRPD3-204ENST00000439775 CDK13Q14004 1512 aaKnown RBP26.78■■□□□ 1.88
SNRPD3-204ENST00000439775 HECW1Q76N89 1606 aa26.78■■□□□ 1.88
SNRPD3-204ENST00000439775 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.75■■□□□ 1.873e-6■■■■□ 23.4
SNRPD3-204ENST00000439775 TTC37Q6PGP7 1564 aa26.71■■□□□ 1.87
SNRPD3-204ENST00000439775 CFAP74Q9C0B2 1584 aa26.69■■□□□ 1.86
SNRPD3-204ENST00000439775 FRMPD1Q5SYB0 1578 aa26.68■■□□□ 1.86
SNRPD3-204ENST00000439775 FANCAO15360 1455 aa26.67■■□□□ 1.86
SNRPD3-204ENST00000439775 RAPGEF3O95398 923 aa26.64■■□□□ 1.86
SNRPD3-204ENST00000439775 AKNAQ7Z591 1439 aa26.63■■□□□ 1.85
SNRPD3-204ENST00000439775 ATP1B4Q9UN42 357 aaPredicted RBP26.61■■□□□ 1.85
SNRPD3-204ENST00000439775 CDK11AQ9UQ88 783 aaPredicted RBP26.61■■□□□ 1.85
SNRPD3-204ENST00000439775 DENND4BO75064 1496 aaPredicted RBP26.61■■□□□ 1.85
SNRPD3-204ENST00000439775 PLCH2O75038 1416 aa26.58■■□□□ 1.85
SNRPD3-204ENST00000439775 RICTORQ6R327 1708 aa26.58■■□□□ 1.85
SNRPD3-204ENST00000439775 PCF11O94913 1555 aaKnown RBP26.57■■□□□ 1.84
SNRPD3-204ENST00000439775 TROQ12816 1431 aaPredicted RBP26.56■■□□□ 1.84
SNRPD3-204ENST00000439775 CASKIN1Q8WXD9 1431 aa26.56■■□□□ 1.84
SNRPD3-204ENST00000439775 KIF14Q15058 1648 aa26.56■■□□□ 1.84
SNRPD3-204ENST00000439775 LRRIQ1Q96JM4 1722 aa26.56■■□□□ 1.84
SNRPD3-204ENST00000439775 ARHGEF40Q8TER5 1519 aa26.55■■□□□ 1.84
SNRPD3-204ENST00000439775 CCDC18Q5T9S5 1454 aa26.54■■□□□ 1.84
SNRPD3-204ENST00000439775 ZMYM4Q5VZL5 1548 aa26.54■■□□□ 1.84
SNRPD3-204ENST00000439775 CLIP1P30622 1438 aa26.53■■□□□ 1.84
SNRPD3-204ENST00000439775 MYO5CQ9NQX4 1742 aa26.51■■□□□ 1.83
SNRPD3-204ENST00000439775 FYCO1Q9BQS8 1478 aa26.5■■□□□ 1.83
SNRPD3-204ENST00000439775 POGZQ7Z3K3 1410 aa26.48■■□□□ 1.83
SNRPD3-204ENST00000439775 MAGI2Q86UL8 1455 aa26.46■■□□□ 1.83
SNRPD3-204ENST00000439775 ADAMTSL3P82987 1691 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms