RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 IGF1RP08069 1367 aa31.93■■■□□ 2.7
AC004540.1-201ENST00000439120 JPH4Q96JJ6 628 aa31.92■■■□□ 2.7
AC004540.1-201ENST00000439120 KIAA0586Q9BVV6 1533 aa31.79■■■□□ 2.68
AC004540.1-201ENST00000439120 CARMIL1Q5VZK9 1371 aa31.77■■■□□ 2.68
AC004540.1-201ENST00000439120 NPM1P06748 294 aaKnown RBP eCLIP31.61■■■□□ 2.65
AC004540.1-201ENST00000439120 IQGAP2Q13576 1575 aa31.56■■■□□ 2.64
AC004540.1-201ENST00000439120 ADCY10Q96PN6 1610 aa31.53■■■□□ 2.64
AC004540.1-201ENST00000439120 CARMIL2Q6F5E8 1435 aa31.53■■■□□ 2.64
AC004540.1-201ENST00000439120 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
AC004540.1-201ENST00000439120 KIF13AQ9H1H9 1805 aa31.5■■■□□ 2.63
AC004540.1-201ENST00000439120 PTPRGP23470 1445 aa31.48■■■□□ 2.63
AC004540.1-201ENST00000439120 TTBK1Q5TCY1 1321 aaPredicted RBP31.48■■■□□ 2.63
AC004540.1-201ENST00000439120 MAPKBP1O60336 1514 aa31.45■■■□□ 2.63
AC004540.1-201ENST00000439120 TNIKQ9UKE5 1360 aa31.43■■■□□ 2.62
AC004540.1-201ENST00000439120 ABCC10Q5T3U5 1492 aa31.4■■■□□ 2.62
AC004540.1-201ENST00000439120 FAM69CQ0P6D2 419 aa31.39■■■□□ 2.62
AC004540.1-201ENST00000439120 DIP2BQ9P265 1576 aa31.34■■■□□ 2.61
AC004540.1-201ENST00000439120 DISP1Q96F81 1524 aa31.33■■■□□ 2.61
AC004540.1-201ENST00000439120 UGGT2Q9NYU1 1516 aa31.32■■■□□ 2.6
AC004540.1-201ENST00000439120 CTTNBP2Q8WZ74 1663 aa31.29■■■□□ 2.6
AC004540.1-201ENST00000439120 ABCC2Q92887 1545 aa31.28■■■□□ 2.6
AC004540.1-201ENST00000439120 KIAA0556O60303 1618 aa31.24■■■□□ 2.59
AC004540.1-201ENST00000439120 UACAQ9BZF9 1416 aa31.24■■■□□ 2.59
AC004540.1-201ENST00000439120 UHRF1BP1LA0JNW5 1464 aa31.22■■■□□ 2.59
AC004540.1-201ENST00000439120 PRXQ9BXM0 1461 aa31.2■■■□□ 2.58
AC004540.1-201ENST00000439120 TSPOAP1O95153 1857 aa31.16■■■□□ 2.58
AC004540.1-201ENST00000439120 AEBP2Q6ZN18 517 aaPredicted RBP31.15■■■□□ 2.58
AC004540.1-201ENST00000439120 ASXL2Q76L83 1435 aa31.15■■■□□ 2.58
AC004540.1-201ENST00000439120 GOLGA3Q08378 1498 aa31.14■■■□□ 2.58
AC004540.1-201ENST00000439120 PLB1Q6P1J6 1458 aa31.14■■■□□ 2.58
AC004540.1-201ENST00000439120 KDM5BQ9UGL1 1544 aa31.07■■■□□ 2.56
AC004540.1-201ENST00000439120 KDM6BO15054 1643 aa31.06■■■□□ 2.56
AC004540.1-201ENST00000439120 ZCCHC11Q5TAX3 1644 aaKnown RBP31.06■■■□□ 2.56
AC004540.1-201ENST00000439120 CSRNP3Q8WYN3 585 aa31.05■■■□□ 2.56
AC004540.1-201ENST00000439120 GLI2P10070 1586 aa31.02■■■□□ 2.56
AC004540.1-201ENST00000439120 EEA1Q15075 1411 aa30.98■■■□□ 2.55
AC004540.1-201ENST00000439120 FAM9AQ8IZU1 332 aaPredicted RBP30.97■■■□□ 2.55
AC004540.1-201ENST00000439120 EPRSP07814 1512 aaKnown RBP30.94■■■□□ 2.54
AC004540.1-201ENST00000439120 ABCA8O94911 1581 aa30.92■■■□□ 2.54
AC004540.1-201ENST00000439120 WDR7Q9Y4E6 1490 aa30.89■■■□□ 2.54
AC004540.1-201ENST00000439120 PPRC1Q5VV67 1664 aaKnown RBP30.89■■■□□ 2.54
AC004540.1-201ENST00000439120 MAP3K4Q9Y6R4 1608 aa30.87■■■□□ 2.53
AC004540.1-201ENST00000439120 P3H3Q8IVL6 736 aa30.87■■■□□ 2.53
AC004540.1-201ENST00000439120 TEX14Q8IWB6 1497 aa30.82■■■□□ 2.52
AC004540.1-201ENST00000439120 SAMD9Q5K651 1589 aa30.8■■■□□ 2.52
AC004540.1-201ENST00000439120 RANGAP1P46060 587 aaPredicted RBP30.75■■■□□ 2.51
AC004540.1-201ENST00000439120 KCNH8Q96L42 1107 aa30.75■■■□□ 2.51
AC004540.1-201ENST00000439120 ARID3CA6NKF2 412 aa30.72■■■□□ 2.51
AC004540.1-201ENST00000439120 KIF21BO75037 1637 aa30.72■■■□□ 2.51
AC004540.1-201ENST00000439120 CFAP43Q8NDM7 1665 aa30.71■■■□□ 2.51
AC004540.1-201ENST00000439120 CD109Q6YHK3 1445 aa30.68■■■□□ 2.5
AC004540.1-201ENST00000439120 RAPGEF6Q8TEU7 1601 aa30.68■■■□□ 2.5
AC004540.1-201ENST00000439120 ATP10BO94823 1461 aa30.65■■■□□ 2.5
AC004540.1-201ENST00000439120 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
AC004540.1-201ENST00000439120 COL17A1Q9UMD9 1497 aaPredicted RBP30.63■■■□□ 2.49
AC004540.1-201ENST00000439120 MAGI3Q5TCQ9 1506 aa30.62■■■□□ 2.49
AC004540.1-201ENST00000439120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.61■■■□□ 2.49
AC004540.1-201ENST00000439120 HNRNPUL2Q1KMD3 747 aaKnown RBP30.61■■■□□ 2.49
AC004540.1-201ENST00000439120 FHOD3Q2V2M9 1422 aa30.61■■■□□ 2.49
AC004540.1-201ENST00000439120 EFCAB5A4FU69 1503 aa30.57■■■□□ 2.49
AC004540.1-201ENST00000439120 KDM4FA0A1W2PPD8 638 aa30.56■■■□□ 2.48
AC004540.1-201ENST00000439120 EHMT2Q96KQ7 1210 aa30.55■■■□□ 2.48
AC004540.1-201ENST00000439120 UBTFP17480 764 aaKnown RBP30.53■■■□□ 2.48
AC004540.1-201ENST00000439120 NUP153P49790 1475 aaKnown RBP30.52■■■□□ 2.48
AC004540.1-201ENST00000439120 ABCA9Q8IUA7 1624 aa30.49■■■□□ 2.47
AC004540.1-201ENST00000439120 ADGRL1O94910 1474 aa30.44■■■□□ 2.46
AC004540.1-201ENST00000439120 PLEKHD1A6NEE1 506 aa30.4■■■□□ 2.46
AC004540.1-201ENST00000439120 ARAP3Q8WWN8 1544 aa30.37■■■□□ 2.45
AC004540.1-201ENST00000439120 PHLDB1Q86UU1 1377 aa30.36■■■□□ 2.45
AC004540.1-201ENST00000439120 NEO1Q92859 1461 aa30.31■■■□□ 2.44
AC004540.1-201ENST00000439120 FMN1Q68DA7 1419 aa30.31■■■□□ 2.44
AC004540.1-201ENST00000439120 ATP1B4Q9UN42 357 aaPredicted RBP30.29■■■□□ 2.44
AC004540.1-201ENST00000439120 ARHGAP35Q9NRY4 1499 aa30.29■■■□□ 2.44
AC004540.1-201ENST00000439120 CDK13Q14004 1512 aaKnown RBP30.27■■■□□ 2.44
AC004540.1-201ENST00000439120 HECW1Q76N89 1606 aa30.26■■■□□ 2.44
AC004540.1-201ENST00000439120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.22■■■□□ 2.43
AC004540.1-201ENST00000439120 RAPGEF3O95398 923 aa30.21■■■□□ 2.43
AC004540.1-201ENST00000439120 CFAP74Q9C0B2 1584 aa30.2■■■□□ 2.43
AC004540.1-201ENST00000439120 TTC37Q6PGP7 1564 aa30.18■■■□□ 2.42
AC004540.1-201ENST00000439120 FANCAO15360 1455 aa30.16■■■□□ 2.42
AC004540.1-201ENST00000439120 CDK11AQ9UQ88 783 aaPredicted RBP30.15■■■□□ 2.42
AC004540.1-201ENST00000439120 FRMPD1Q5SYB0 1578 aa30.13■■■□□ 2.41
AC004540.1-201ENST00000439120 AKNAQ7Z591 1439 aa30.13■■■□□ 2.41
AC004540.1-201ENST00000439120 DENND4BO75064 1496 aaPredicted RBP30.12■■■□□ 2.41
AC004540.1-201ENST00000439120 RICTORQ6R327 1708 aa30.06■■■□□ 2.4
AC004540.1-201ENST00000439120 KIF14Q15058 1648 aa30.04■■■□□ 2.4
AC004540.1-201ENST00000439120 PLCH2O75038 1416 aa30.03■■■□□ 2.4
AC004540.1-201ENST00000439120 CLIP1P30622 1438 aa30.03■■■□□ 2.4
AC004540.1-201ENST00000439120 MYO5CQ9NQX4 1742 aa30.02■■■□□ 2.4
AC004540.1-201ENST00000439120 ARID4BQ4LE39 1312 aaPredicted RBP30.02■■■□□ 2.4
AC004540.1-201ENST00000439120 ARHGEF40Q8TER5 1519 aa30.01■■■□□ 2.39
AC004540.1-201ENST00000439120 LRRIQ1Q96JM4 1722 aa30■■■□□ 2.39
AC004540.1-201ENST00000439120 TROQ12816 1431 aaPredicted RBP30■■■□□ 2.39
AC004540.1-201ENST00000439120 PCF11O94913 1555 aaKnown RBP29.99■■■□□ 2.39
AC004540.1-201ENST00000439120 CASKIN1Q8WXD9 1431 aa29.96■■■□□ 2.39
AC004540.1-201ENST00000439120 CCDC18Q5T9S5 1454 aa29.96■■■□□ 2.39
AC004540.1-201ENST00000439120 EFCAB2Q5VUJ9 269 aa29.95■■■□□ 2.39
AC004540.1-201ENST00000439120 ZMYM4Q5VZL5 1548 aa29.95■■■□□ 2.38
AC004540.1-201ENST00000439120 SCAPERQ9BY12 1400 aa29.95■■■□□ 2.38
AC004540.1-201ENST00000439120 HECW2Q9P2P5 1572 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms