RNA–Protein interactions for RNA: ENST00000439120.1

AC004540.1-201, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 891 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-201ENST00000439120 IGF1RP08069 1367 aa31.93■■■□□ 2.7
AC004540.1-201ENST00000439120 JPH4Q96JJ6 628 aa31.92■■■□□ 2.7
AC004540.1-201ENST00000439120 KIAA0586Q9BVV6 1533 aa31.79■■■□□ 2.68
AC004540.1-201ENST00000439120 CARMIL1Q5VZK9 1371 aa31.77■■■□□ 2.68
AC004540.1-201ENST00000439120 NPM1P06748 294 aaKnown RBP eCLIP31.61■■■□□ 2.65
AC004540.1-201ENST00000439120 IQGAP2Q13576 1575 aa31.56■■■□□ 2.64
AC004540.1-201ENST00000439120 ADCY10Q96PN6 1610 aa31.53■■■□□ 2.64
AC004540.1-201ENST00000439120 CARMIL2Q6F5E8 1435 aa31.53■■■□□ 2.64
AC004540.1-201ENST00000439120 RAPGEF2Q9Y4G8 1499 aa31.52■■■□□ 2.64
AC004540.1-201ENST00000439120 KIF13AQ9H1H9 1805 aa31.5■■■□□ 2.63
AC004540.1-201ENST00000439120 PTPRGP23470 1445 aa31.48■■■□□ 2.63
AC004540.1-201ENST00000439120 TTBK1Q5TCY1 1321 aaPredicted RBP31.48■■■□□ 2.63
AC004540.1-201ENST00000439120 MAPKBP1O60336 1514 aa31.45■■■□□ 2.63
AC004540.1-201ENST00000439120 TNIKQ9UKE5 1360 aa31.43■■■□□ 2.62
AC004540.1-201ENST00000439120 ABCC10Q5T3U5 1492 aa31.4■■■□□ 2.62
AC004540.1-201ENST00000439120 FAM69CQ0P6D2 419 aa31.39■■■□□ 2.62
AC004540.1-201ENST00000439120 DIP2BQ9P265 1576 aa31.34■■■□□ 2.61
AC004540.1-201ENST00000439120 DISP1Q96F81 1524 aa31.33■■■□□ 2.61
AC004540.1-201ENST00000439120 UGGT2Q9NYU1 1516 aa31.32■■■□□ 2.6
AC004540.1-201ENST00000439120 CTTNBP2Q8WZ74 1663 aa31.29■■■□□ 2.6
AC004540.1-201ENST00000439120 ABCC2Q92887 1545 aa31.28■■■□□ 2.6
AC004540.1-201ENST00000439120 KIAA0556O60303 1618 aa31.24■■■□□ 2.59
AC004540.1-201ENST00000439120 UACAQ9BZF9 1416 aa31.24■■■□□ 2.59
AC004540.1-201ENST00000439120 UHRF1BP1LA0JNW5 1464 aa31.22■■■□□ 2.59
AC004540.1-201ENST00000439120 PRXQ9BXM0 1461 aa31.2■■■□□ 2.58
AC004540.1-201ENST00000439120 TSPOAP1O95153 1857 aa31.16■■■□□ 2.58
AC004540.1-201ENST00000439120 AEBP2Q6ZN18 517 aaPredicted RBP31.15■■■□□ 2.58
AC004540.1-201ENST00000439120 ASXL2Q76L83 1435 aa31.15■■■□□ 2.58
AC004540.1-201ENST00000439120 GOLGA3Q08378 1498 aa31.14■■■□□ 2.58
AC004540.1-201ENST00000439120 PLB1Q6P1J6 1458 aa31.14■■■□□ 2.58
AC004540.1-201ENST00000439120 KDM5BQ9UGL1 1544 aa31.07■■■□□ 2.56
AC004540.1-201ENST00000439120 KDM6BO15054 1643 aa31.06■■■□□ 2.56
AC004540.1-201ENST00000439120 ZCCHC11Q5TAX3 1644 aaKnown RBP31.06■■■□□ 2.56
AC004540.1-201ENST00000439120 CSRNP3Q8WYN3 585 aa31.05■■■□□ 2.56
AC004540.1-201ENST00000439120 GLI2P10070 1586 aa31.02■■■□□ 2.56
AC004540.1-201ENST00000439120 EEA1Q15075 1411 aa30.98■■■□□ 2.55
AC004540.1-201ENST00000439120 FAM9AQ8IZU1 332 aaPredicted RBP30.97■■■□□ 2.55
AC004540.1-201ENST00000439120 EPRSP07814 1512 aaKnown RBP30.94■■■□□ 2.54
AC004540.1-201ENST00000439120 ABCA8O94911 1581 aa30.92■■■□□ 2.54
AC004540.1-201ENST00000439120 WDR7Q9Y4E6 1490 aa30.89■■■□□ 2.54
AC004540.1-201ENST00000439120 PPRC1Q5VV67 1664 aaKnown RBP30.89■■■□□ 2.54
AC004540.1-201ENST00000439120 MAP3K4Q9Y6R4 1608 aa30.87■■■□□ 2.53
AC004540.1-201ENST00000439120 P3H3Q8IVL6 736 aa30.87■■■□□ 2.53
AC004540.1-201ENST00000439120 TEX14Q8IWB6 1497 aa30.82■■■□□ 2.52
AC004540.1-201ENST00000439120 SAMD9Q5K651 1589 aa30.8■■■□□ 2.52
AC004540.1-201ENST00000439120 RANGAP1P46060 587 aaPredicted RBP30.75■■■□□ 2.51
AC004540.1-201ENST00000439120 KCNH8Q96L42 1107 aa30.75■■■□□ 2.51
AC004540.1-201ENST00000439120 ARID3CA6NKF2 412 aa30.72■■■□□ 2.51
AC004540.1-201ENST00000439120 KIF21BO75037 1637 aa30.72■■■□□ 2.51
AC004540.1-201ENST00000439120 CFAP43Q8NDM7 1665 aa30.71■■■□□ 2.51
AC004540.1-201ENST00000439120 CD109Q6YHK3 1445 aa30.68■■■□□ 2.5
AC004540.1-201ENST00000439120 RAPGEF6Q8TEU7 1601 aa30.68■■■□□ 2.5
AC004540.1-201ENST00000439120 ATP10BO94823 1461 aa30.65■■■□□ 2.5
AC004540.1-201ENST00000439120 CHIC1Q5VXU3 224 aa30.63■■■□□ 2.49
AC004540.1-201ENST00000439120 COL17A1Q9UMD9 1497 aaPredicted RBP30.63■■■□□ 2.49
AC004540.1-201ENST00000439120 MAGI3Q5TCQ9 1506 aa30.62■■■□□ 2.49
AC004540.1-201ENST00000439120 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.61■■■□□ 2.49
AC004540.1-201ENST00000439120 HNRNPUL2Q1KMD3 747 aaKnown RBP30.61■■■□□ 2.49
AC004540.1-201ENST00000439120 FHOD3Q2V2M9 1422 aa30.61■■■□□ 2.49
AC004540.1-201ENST00000439120 EFCAB5A4FU69 1503 aa30.57■■■□□ 2.49
AC004540.1-201ENST00000439120 KDM4FA0A1W2PPD8 638 aa30.56■■■□□ 2.48
AC004540.1-201ENST00000439120 EHMT2Q96KQ7 1210 aa30.55■■■□□ 2.48
AC004540.1-201ENST00000439120 UBTFP17480 764 aaKnown RBP30.53■■■□□ 2.48
AC004540.1-201ENST00000439120 NUP153P49790 1475 aaKnown RBP30.52■■■□□ 2.48
AC004540.1-201ENST00000439120 ABCA9Q8IUA7 1624 aa30.49■■■□□ 2.47
AC004540.1-201ENST00000439120 ADGRL1O94910 1474 aa30.44■■■□□ 2.46
AC004540.1-201ENST00000439120 PLEKHD1A6NEE1 506 aa30.4■■■□□ 2.46
AC004540.1-201ENST00000439120 ARAP3Q8WWN8 1544 aa30.37■■■□□ 2.45
AC004540.1-201ENST00000439120 PHLDB1Q86UU1 1377 aa30.36■■■□□ 2.45
AC004540.1-201ENST00000439120 NEO1Q92859 1461 aa30.31■■■□□ 2.44
AC004540.1-201ENST00000439120 FMN1Q68DA7 1419 aa30.31■■■□□ 2.44
AC004540.1-201ENST00000439120 ATP1B4Q9UN42 357 aaPredicted RBP30.29■■■□□ 2.44
AC004540.1-201ENST00000439120 ARHGAP35Q9NRY4 1499 aa30.29■■■□□ 2.44
AC004540.1-201ENST00000439120 CDK13Q14004 1512 aaKnown RBP30.27■■■□□ 2.44
AC004540.1-201ENST00000439120 HECW1Q76N89 1606 aa30.26■■■□□ 2.44
AC004540.1-201ENST00000439120 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.22■■■□□ 2.43
AC004540.1-201ENST00000439120 RAPGEF3O95398 923 aa30.21■■■□□ 2.43
AC004540.1-201ENST00000439120 CFAP74Q9C0B2 1584 aa30.2■■■□□ 2.43
AC004540.1-201ENST00000439120 TTC37Q6PGP7 1564 aa30.18■■■□□ 2.42
AC004540.1-201ENST00000439120 FANCAO15360 1455 aa30.16■■■□□ 2.42
AC004540.1-201ENST00000439120 CDK11AQ9UQ88 783 aaPredicted RBP30.15■■■□□ 2.42
AC004540.1-201ENST00000439120 FRMPD1Q5SYB0 1578 aa30.13■■■□□ 2.41
AC004540.1-201ENST00000439120 AKNAQ7Z591 1439 aa30.13■■■□□ 2.41
AC004540.1-201ENST00000439120 DENND4BO75064 1496 aaPredicted RBP30.12■■■□□ 2.41
AC004540.1-201ENST00000439120 RICTORQ6R327 1708 aa30.06■■■□□ 2.4
AC004540.1-201ENST00000439120 KIF14Q15058 1648 aa30.04■■■□□ 2.4
AC004540.1-201ENST00000439120 PLCH2O75038 1416 aa30.03■■■□□ 2.4
AC004540.1-201ENST00000439120 CLIP1P30622 1438 aa30.03■■■□□ 2.4
AC004540.1-201ENST00000439120 MYO5CQ9NQX4 1742 aa30.02■■■□□ 2.4
AC004540.1-201ENST00000439120 ARID4BQ4LE39 1312 aaPredicted RBP30.02■■■□□ 2.4
AC004540.1-201ENST00000439120 ARHGEF40Q8TER5 1519 aa30.01■■■□□ 2.39
AC004540.1-201ENST00000439120 LRRIQ1Q96JM4 1722 aa30■■■□□ 2.39
AC004540.1-201ENST00000439120 TROQ12816 1431 aaPredicted RBP30■■■□□ 2.39
AC004540.1-201ENST00000439120 PCF11O94913 1555 aaKnown RBP29.99■■■□□ 2.39
AC004540.1-201ENST00000439120 CASKIN1Q8WXD9 1431 aa29.96■■■□□ 2.39
AC004540.1-201ENST00000439120 CCDC18Q5T9S5 1454 aa29.96■■■□□ 2.39
AC004540.1-201ENST00000439120 EFCAB2Q5VUJ9 269 aa29.95■■■□□ 2.39
AC004540.1-201ENST00000439120 ZMYM4Q5VZL5 1548 aa29.95■■■□□ 2.38
AC004540.1-201ENST00000439120 SCAPERQ9BY12 1400 aa29.95■■■□□ 2.38
AC004540.1-201ENST00000439120 HECW2Q9P2P5 1572 aa29.94■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 527 ms