RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 SHROOM2Q13796 1616 aa28.24■■■□□ 2.11
TARDBP-203ENST00000439080 CTTNBP2Q8WZ74 1663 aa28.21■■■□□ 2.11
TARDBP-203ENST00000439080 CSRNP3Q8WYN3 585 aa28.19■■■□□ 2.1
TARDBP-203ENST00000439080 FAM9AQ8IZU1 332 aaPredicted RBP28.18■■■□□ 2.1
TARDBP-203ENST00000439080 KIF21BO75037 1637 aa28.16■■■□□ 2.1
TARDBP-203ENST00000439080 KIAA0586Q9BVV6 1533 aa28.15■■■□□ 2.1
TARDBP-203ENST00000439080 IQGAP2Q13576 1575 aa28.13■■■□□ 2.09
TARDBP-203ENST00000439080 ERCC6L2Q5T890 1561 aa28.08■■■□□ 2.09
TARDBP-203ENST00000439080 ARAP1Q96P48 1450 aa28.03■■■□□ 2.08
TARDBP-203ENST00000439080 PRG4Q92954 1404 aaPredicted RBP27.99■■■□□ 2.07
TARDBP-203ENST00000439080 JPH4Q96JJ6 628 aa27.98■■■□□ 2.07
TARDBP-203ENST00000439080 GOLGA3Q08378 1498 aa27.94■■■□□ 2.06
TARDBP-203ENST00000439080 UGGT2Q9NYU1 1516 aa27.94■■■□□ 2.06
TARDBP-203ENST00000439080 KIAA0556O60303 1618 aa27.88■■■□□ 2.05
TARDBP-203ENST00000439080 DISP1Q96F81 1524 aa27.86■■■□□ 2.05
TARDBP-203ENST00000439080 CARMIL2Q6F5E8 1435 aa27.84■■■□□ 2.05
TARDBP-203ENST00000439080 CYB5RLQ6IPT4 315 aa27.81■■■□□ 2.04
TARDBP-203ENST00000439080 EHMT2Q96KQ7 1210 aa27.81■■■□□ 2.04
TARDBP-203ENST00000439080 SAMD9Q5K651 1589 aa27.78■■■□□ 2.04
TARDBP-203ENST00000439080 UBTFP17480 764 aaKnown RBP27.72■■■□□ 2.03
TARDBP-203ENST00000439080 TNIKQ9UKE5 1360 aa27.71■■■□□ 2.03
TARDBP-203ENST00000439080 EFCAB5A4FU69 1503 aa27.68■■■□□ 2.02
TARDBP-203ENST00000439080 ADCY10Q96PN6 1610 aa27.65■■■□□ 2.02
TARDBP-203ENST00000439080 PTPRGP23470 1445 aa27.65■■■□□ 2.02
TARDBP-203ENST00000439080 TTBK1Q5TCY1 1321 aaPredicted RBP27.61■■■□□ 2.01
TARDBP-203ENST00000439080 RANGAP1P46060 587 aaPredicted RBP27.6■■■□□ 2.01
TARDBP-203ENST00000439080 ABCC2Q92887 1545 aa27.55■■■□□ 2
TARDBP-203ENST00000439080 FHOD3Q2V2M9 1422 aa27.54■■■□□ 2
TARDBP-203ENST00000439080 P3H3Q8IVL6 736 aa27.53■■■□□ 2
TARDBP-203ENST00000439080 ARHGAP35Q9NRY4 1499 aa27.52■■■□□ 2
TARDBP-203ENST00000439080 UACAQ9BZF9 1416 aa27.52■■■□□ 2
TARDBP-203ENST00000439080 ABCA8O94911 1581 aa27.52■■■□□ 2
TARDBP-203ENST00000439080 UHRF1BP1LA0JNW5 1464 aa27.51■■□□□ 1.99
TARDBP-203ENST00000439080 PLB1Q6P1J6 1458 aa27.5■■□□□ 1.99
TARDBP-203ENST00000439080 RAPGEF6Q8TEU7 1601 aa27.46■■□□□ 1.99
TARDBP-203ENST00000439080 ZCCHC11Q5TAX3 1644 aaKnown RBP27.43■■□□□ 1.98
TARDBP-203ENST00000439080 CLIP1P30622 1438 aa27.41■■□□□ 1.98
TARDBP-203ENST00000439080 MAPKBP1O60336 1514 aa27.4■■□□□ 1.98
TARDBP-203ENST00000439080 LOC105371045A0A1W2PR82 267 aa27.39■■□□□ 1.98
TARDBP-203ENST00000439080 KDM5BQ9UGL1 1544 aa27.38■■□□□ 1.97
TARDBP-203ENST00000439080 CEP162Q5TB80 1403 aa27.37■■□□□ 1.97
TARDBP-203ENST00000439080 FMN1Q68DA7 1419 aa27.34■■□□□ 1.97
TARDBP-203ENST00000439080 NPM1P06748 294 aaKnown RBP eCLIP27.33■■□□□ 1.97
TARDBP-203ENST00000439080 NUP153P49790 1475 aaKnown RBP27.3■■□□□ 1.96
TARDBP-203ENST00000439080 KIF13AQ9H1H9 1805 aa27.29■■□□□ 1.96
TARDBP-203ENST00000439080 HECW1Q76N89 1606 aa27.29■■□□□ 1.96
TARDBP-203ENST00000439080 PCF11O94913 1555 aaKnown RBP27.29■■□□□ 1.96
TARDBP-203ENST00000439080 DIP2BQ9P265 1576 aa27.25■■□□□ 1.95
TARDBP-203ENST00000439080 ASXL2Q76L83 1435 aa27.24■■□□□ 1.95
TARDBP-203ENST00000439080 LRRIQ1Q96JM4 1722 aa27.24■■□□□ 1.95
TARDBP-203ENST00000439080 ATP10BO94823 1461 aa27.21■■□□□ 1.95
TARDBP-203ENST00000439080 ARID3CA6NKF2 412 aa27.19■■□□□ 1.94
TARDBP-203ENST00000439080 ABCC10Q5T3U5 1492 aa27.18■■□□□ 1.94
TARDBP-203ENST00000439080 WDR7Q9Y4E6 1490 aa27.17■■□□□ 1.94
TARDBP-203ENST00000439080 TRHP20396 242 aaPredicted RBP27.17■■□□□ 1.94
TARDBP-203ENST00000439080 CDK13Q14004 1512 aaKnown RBP27.17■■□□□ 1.94
TARDBP-203ENST00000439080 FYCO1Q9BQS8 1478 aa27.16■■□□□ 1.94
TARDBP-203ENST00000439080 CASKIN1Q8WXD9 1431 aa27.15■■□□□ 1.94
TARDBP-203ENST00000439080 EPRSP07814 1512 aaKnown RBP27.13■■□□□ 1.93
TARDBP-203ENST00000439080 GLI2P10070 1586 aa27.09■■□□□ 1.93
TARDBP-203ENST00000439080 CCDC18Q5T9S5 1454 aa27.07■■□□□ 1.92
TARDBP-203ENST00000439080 ATP1B4Q9UN42 357 aaPredicted RBP27.07■■□□□ 1.92
TARDBP-203ENST00000439080 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.05■■□□□ 1.92
TARDBP-203ENST00000439080 HNRNPUL2Q1KMD3 747 aaKnown RBP27.05■■□□□ 1.92
TARDBP-203ENST00000439080 TSPOAP1O95153 1857 aa27.04■■□□□ 1.92
TARDBP-203ENST00000439080 MAP3K4Q9Y6R4 1608 aa27.04■■□□□ 1.92
TARDBP-203ENST00000439080 VPS8Q8N3P4 1428 aa27.02■■□□□ 1.92
TARDBP-203ENST00000439080 FAM69CQ0P6D2 419 aa27.02■■□□□ 1.92
TARDBP-203ENST00000439080 CFAP43Q8NDM7 1665 aa27.01■■□□□ 1.91
TARDBP-203ENST00000439080 PPRC1Q5VV67 1664 aaKnown RBP26.98■■□□□ 1.91
TARDBP-203ENST00000439080 ABCA9Q8IUA7 1624 aa26.97■■□□□ 1.91
TARDBP-203ENST00000439080 KIF14Q15058 1648 aa26.92■■□□□ 1.9
TARDBP-203ENST00000439080 KCNH8Q96L42 1107 aa26.92■■□□□ 1.9
TARDBP-203ENST00000439080 MAGI3Q5TCQ9 1506 aa26.92■■□□□ 1.9
TARDBP-203ENST00000439080 PLEKHD1A6NEE1 506 aa26.91■■□□□ 1.9
TARDBP-203ENST00000439080 TTC37Q6PGP7 1564 aa26.9■■□□□ 1.9
TARDBP-203ENST00000439080 TROQ12816 1431 aaPredicted RBP26.89■■□□□ 1.9
TARDBP-203ENST00000439080 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.88■■□□□ 1.891e-7■■■■■ 34.9
TARDBP-203ENST00000439080 TIAM1Q13009 1591 aa26.87■■□□□ 1.89
TARDBP-203ENST00000439080 CDK11AQ9UQ88 783 aaPredicted RBP26.86■■□□□ 1.89
TARDBP-203ENST00000439080 CD109Q6YHK3 1445 aa26.83■■□□□ 1.89
TARDBP-203ENST00000439080 MYO5CQ9NQX4 1742 aa26.82■■□□□ 1.88
TARDBP-203ENST00000439080 EHBP1L1Q8N3D4 1523 aa26.82■■□□□ 1.88
TARDBP-203ENST00000439080 TEX14Q8IWB6 1497 aa26.81■■□□□ 1.88
TARDBP-203ENST00000439080 MAP3K1Q13233 1512 aa26.76■■□□□ 1.87
TARDBP-203ENST00000439080 KDM6BO15054 1643 aa26.74■■□□□ 1.87
TARDBP-203ENST00000439080 MTUS2Q5JR59 1369 aa26.73■■□□□ 1.87
TARDBP-203ENST00000439080 CFAP74Q9C0B2 1584 aa26.73■■□□□ 1.87
TARDBP-203ENST00000439080 CDC42BPAQ5VT25 1732 aa26.72■■□□□ 1.87
TARDBP-203ENST00000439080 PREX2Q70Z35 1606 aa26.72■■□□□ 1.87
TARDBP-203ENST00000439080 SUPT6HQ7KZ85 1726 aaKnown RBP26.71■■□□□ 1.87
TARDBP-203ENST00000439080 CDC42BPBQ9Y5S2 1711 aa26.69■■□□□ 1.86
TARDBP-203ENST00000439080 LRRC9Q6ZRR7 1453 aa26.68■■□□□ 1.86
TARDBP-203ENST00000439080 ARAP3Q8WWN8 1544 aa26.68■■□□□ 1.86
TARDBP-203ENST00000439080 FANCAO15360 1455 aa26.64■■□□□ 1.86
TARDBP-203ENST00000439080 NEO1Q92859 1461 aa26.64■■□□□ 1.86
TARDBP-203ENST00000439080 PLCH2O75038 1416 aa26.64■■□□□ 1.86
TARDBP-203ENST00000439080 ITSN2Q9NZM3 1697 aa26.64■■□□□ 1.85
TARDBP-203ENST00000439080 ARHGAP5Q13017 1502 aa26.62■■□□□ 1.85
TARDBP-203ENST00000439080 NCOA2Q15596 1464 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms