RNA–Protein interactions for RNA: ENST00000438981.1

FN1-210, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 723 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-210ENST00000438981 KIAA0586Q9BVV6 1533 aa13.74□□□□□ -0.21
FN1-210ENST00000438981 IQGAP2Q13576 1575 aa13.74□□□□□ -0.21
FN1-210ENST00000438981 CARMIL1Q5VZK9 1371 aa13.73□□□□□ -0.21
FN1-210ENST00000438981 PRG4Q92954 1404 aaPredicted RBP13.73□□□□□ -0.21
FN1-210ENST00000438981 RAPGEF2Q9Y4G8 1499 aa13.7□□□□□ -0.22
FN1-210ENST00000438981 ADCY10Q96PN6 1610 aa13.68□□□□□ -0.22
FN1-210ENST00000438981 PRXQ9BXM0 1461 aa13.64□□□□□ -0.23
FN1-210ENST00000438981 JPH4Q96JJ6 628 aa13.64□□□□□ -0.23
FN1-210ENST00000438981 KIF13AQ9H1H9 1805 aa13.64□□□□□ -0.23
FN1-210ENST00000438981 KIAA0556O60303 1618 aa13.64□□□□□ -0.23
FN1-210ENST00000438981 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
FN1-210ENST00000438981 DISP1Q96F81 1524 aa13.62□□□□□ -0.23
FN1-210ENST00000438981 EEA1Q15075 1411 aa13.56□□□□□ -0.24
FN1-210ENST00000438981 MAPKBP1O60336 1514 aa13.56□□□□□ -0.24
FN1-210ENST00000438981 KIF21BO75037 1637 aa13.56□□□□□ -0.24
FN1-210ENST00000438981 CARMIL2Q6F5E8 1435 aa13.56□□□□□ -0.24
FN1-210ENST00000438981 DIP2BQ9P265 1576 aa13.54□□□□□ -0.24
FN1-210ENST00000438981 TNIKQ9UKE5 1360 aa13.53□□□□□ -0.24
FN1-210ENST00000438981 SAMD9Q5K651 1589 aa13.52□□□□□ -0.25
FN1-210ENST00000438981 ABCC2Q92887 1545 aa13.51□□□□□ -0.25
FN1-210ENST00000438981 TRHP20396 242 aaPredicted RBP13.51□□□□□ -0.25
FN1-210ENST00000438981 ZCCHC11Q5TAX3 1644 aaKnown RBP13.5□□□□□ -0.25
FN1-210ENST00000438981 PTPRGP23470 1445 aa13.5□□□□□ -0.25
FN1-210ENST00000438981 UHRF1BP1LA0JNW5 1464 aa13.49□□□□□ -0.25
FN1-210ENST00000438981 GOLGA3Q08378 1498 aa13.48□□□□□ -0.25
FN1-210ENST00000438981 ABCA8O94911 1581 aa13.46□□□□□ -0.25
FN1-210ENST00000438981 CHIC1Q5VXU3 224 aa13.46□□□□□ -0.25
FN1-210ENST00000438981 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
FN1-210ENST00000438981 TSPOAP1O95153 1857 aa13.45□□□□□ -0.26
FN1-210ENST00000438981 ABCC10Q5T3U5 1492 aa13.45□□□□□ -0.26
FN1-210ENST00000438981 UACAQ9BZF9 1416 aa13.45□□□□□ -0.26
FN1-210ENST00000438981 KDM5BQ9UGL1 1544 aa13.43□□□□□ -0.26
FN1-210ENST00000438981 PLB1Q6P1J6 1458 aa13.42□□□□□ -0.26
FN1-210ENST00000438981 TTBK1Q5TCY1 1321 aaPredicted RBP13.42□□□□□ -0.26
FN1-210ENST00000438981 PPRC1Q5VV67 1664 aaKnown RBP13.42□□□□□ -0.26
FN1-210ENST00000438981 EFCAB5A4FU69 1503 aa13.39□□□□□ -0.27
FN1-210ENST00000438981 RAPGEF6Q8TEU7 1601 aa13.39□□□□□ -0.27
FN1-210ENST00000438981 FAM9AQ8IZU1 332 aaPredicted RBP13.39□□□□□ -0.27
FN1-210ENST00000438981 MAP3K4Q9Y6R4 1608 aa13.39□□□□□ -0.27
FN1-210ENST00000438981 ASXL2Q76L83 1435 aa13.39□□□□□ -0.27
FN1-210ENST00000438981 GLI2P10070 1586 aa13.38□□□□□ -0.27
FN1-210ENST00000438981 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
FN1-210ENST00000438981 WDR7Q9Y4E6 1490 aa13.34□□□□□ -0.27
FN1-210ENST00000438981 EPRSP07814 1512 aaKnown RBP13.34□□□□□ -0.27
FN1-210ENST00000438981 FHOD3Q2V2M9 1422 aa13.33□□□□□ -0.28
FN1-210ENST00000438981 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
FN1-210ENST00000438981 KDM6BO15054 1643 aa13.31□□□□□ -0.28
FN1-210ENST00000438981 FAM69CQ0P6D2 419 aa13.31□□□□□ -0.28
FN1-210ENST00000438981 NUP153P49790 1475 aaKnown RBP13.29□□□□□ -0.28
FN1-210ENST00000438981 LRRIQ1Q96JM4 1722 aa13.28□□□□□ -0.28
FN1-210ENST00000438981 P3H3Q8IVL6 736 aa13.28□□□□□ -0.28
FN1-210ENST00000438981 ATP10BO94823 1461 aa13.26□□□□□ -0.29
FN1-210ENST00000438981 ARHGAP35Q9NRY4 1499 aa13.26□□□□□ -0.29
FN1-210ENST00000438981 HECW1Q76N89 1606 aa13.25□□□□□ -0.29
FN1-210ENST00000438981 ABCA9Q8IUA7 1624 aa13.25□□□□□ -0.29
FN1-210ENST00000438981 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
FN1-210ENST00000438981 EHMT2Q96KQ7 1210 aa13.24□□□□□ -0.29
FN1-210ENST00000438981 TEX14Q8IWB6 1497 aa13.22□□□□□ -0.29
FN1-210ENST00000438981 PCF11O94913 1555 aaKnown RBP13.21□□□□□ -0.29
FN1-210ENST00000438981 CDK13Q14004 1512 aaKnown RBP13.21□□□□□ -0.29
FN1-210ENST00000438981 UBTFP17480 764 aaKnown RBP13.2□□□□□ -0.3
FN1-210ENST00000438981 ARID3CA6NKF2 412 aa13.19□□□□□ -0.3
FN1-210ENST00000438981 MAGI3Q5TCQ9 1506 aa13.18□□□□□ -0.3
FN1-210ENST00000438981 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
FN1-210ENST00000438981 TTC37Q6PGP7 1564 aa13.18□□□□□ -0.3
FN1-210ENST00000438981 CD109Q6YHK3 1445 aa13.14□□□□□ -0.31
FN1-210ENST00000438981 COL17A1Q9UMD9 1497 aaPredicted RBP13.14□□□□□ -0.31
FN1-210ENST00000438981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.13□□□□□ -0.31
FN1-210ENST00000438981 CFAP74Q9C0B2 1584 aa13.13□□□□□ -0.31
FN1-210ENST00000438981 MYO5CQ9NQX4 1742 aa13.13□□□□□ -0.31
FN1-210ENST00000438981 KIF14Q15058 1648 aa13.13□□□□□ -0.31
FN1-210ENST00000438981 FRMPD1Q5SYB0 1578 aa13.11□□□□□ -0.31
FN1-210ENST00000438981 KCNH8Q96L42 1107 aa13.11□□□□□ -0.31
FN1-210ENST00000438981 CLIP1P30622 1438 aa13.11□□□□□ -0.31
FN1-210ENST00000438981 FYCO1Q9BQS8 1478 aa13.1□□□□□ -0.31
FN1-210ENST00000438981 RICTORQ6R327 1708 aa13.09□□□□□ -0.31
FN1-210ENST00000438981 CASKIN1Q8WXD9 1431 aa13.08□□□□□ -0.32
FN1-210ENST00000438981 CCDC18Q5T9S5 1454 aa13.08□□□□□ -0.32
FN1-210ENST00000438981 ARAP3Q8WWN8 1544 aa13.08□□□□□ -0.32
FN1-210ENST00000438981 NEO1Q92859 1461 aa13.07□□□□□ -0.32
FN1-210ENST00000438981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.06□□□□□ -0.32
FN1-210ENST00000438981 HNRNPUL2Q1KMD3 747 aaKnown RBP13.06□□□□□ -0.32
FN1-210ENST00000438981 PREX2Q70Z35 1606 aa13.05□□□□□ -0.32
FN1-210ENST00000438981 CDC42BPAQ5VT25 1732 aa13.05□□□□□ -0.32
FN1-210ENST00000438981 CDC42BPBQ9Y5S2 1711 aa13.05□□□□□ -0.32
FN1-210ENST00000438981 CEP162Q5TB80 1403 aa13.05□□□□□ -0.32
FN1-210ENST00000438981 TROQ12816 1431 aaPredicted RBP13.03□□□□□ -0.32
FN1-210ENST00000438981 FANCAO15360 1455 aa13.02□□□□□ -0.33
FN1-210ENST00000438981 ARHGEF40Q8TER5 1519 aa13.02□□□□□ -0.33
FN1-210ENST00000438981 PLEKHD1A6NEE1 506 aa13.01□□□□□ -0.33
FN1-210ENST00000438981 ZMYM4Q5VZL5 1548 aa12.99□□□□□ -0.33
FN1-210ENST00000438981 ADGRL1O94910 1474 aa12.99□□□□□ -0.33
FN1-210ENST00000438981 PHLDB1Q86UU1 1377 aa12.99□□□□□ -0.33
FN1-210ENST00000438981 ATP1B4Q9UN42 357 aaPredicted RBP12.98□□□□□ -0.33
FN1-210ENST00000438981 ITSN2Q9NZM3 1697 aa12.98□□□□□ -0.33
FN1-210ENST00000438981 SIGLEC1Q9BZZ2 1709 aa12.97□□□□□ -0.33
FN1-210ENST00000438981 PLCH2O75038 1416 aa12.96□□□□□ -0.33
FN1-210ENST00000438981 AKNAQ7Z591 1439 aa12.96□□□□□ -0.33
FN1-210ENST00000438981 ARHGAP5Q13017 1502 aa12.96□□□□□ -0.33
FN1-210ENST00000438981 EHBP1L1Q8N3D4 1523 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms