RNA–Protein interactions for RNA: ENST00000438571.5

GTF3A-204, Transcript of general transcription factor IIIA, humanhuman

TSL 5

Gene GTF3A, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-204ENST00000438571 JPH4Q96JJ6 628 aa31.93■■■□□ 2.7
GTF3A-204ENST00000438571 KIF27Q86VH2 1401 aa31.92■■■□□ 2.7
GTF3A-204ENST00000438571 IGF1RP08069 1367 aa31.91■■■□□ 2.7
GTF3A-204ENST00000438571 KIAA0586Q9BVV6 1533 aa31.81■■■□□ 2.68
GTF3A-204ENST00000438571 ADCY10Q96PN6 1610 aa31.81■■■□□ 2.68
GTF3A-204ENST00000438571 CARMIL1Q5VZK9 1371 aa31.69■■■□□ 2.66
GTF3A-204ENST00000438571 MAPKBP1O60336 1514 aa31.66■■■□□ 2.66
GTF3A-204ENST00000438571 DIP2BQ9P265 1576 aa31.64■■■□□ 2.66
GTF3A-204ENST00000438571 IQGAP2Q13576 1575 aa31.61■■■□□ 2.65
GTF3A-204ENST00000438571 ABCC10Q5T3U5 1492 aa31.59■■■□□ 2.65
GTF3A-204ENST00000438571 TSPOAP1O95153 1857 aa31.55■■■□□ 2.64
GTF3A-204ENST00000438571 NPM1P06748 294 aaKnown RBP eCLIP31.5■■■□□ 2.63
GTF3A-204ENST00000438571 FAM69CQ0P6D2 419 aa31.49■■■□□ 2.63
GTF3A-204ENST00000438571 PTPRGP23470 1445 aa31.48■■■□□ 2.63
GTF3A-204ENST00000438571 TTBK1Q5TCY1 1321 aaPredicted RBP31.48■■■□□ 2.63
GTF3A-204ENST00000438571 DISP1Q96F81 1524 aa31.45■■■□□ 2.63
GTF3A-204ENST00000438571 RAPGEF2Q9Y4G8 1499 aa31.45■■■□□ 2.62
GTF3A-204ENST00000438571 TNIKQ9UKE5 1360 aa31.43■■■□□ 2.62
GTF3A-204ENST00000438571 CARMIL2Q6F5E8 1435 aa31.43■■■□□ 2.62
GTF3A-204ENST00000438571 CTTNBP2Q8WZ74 1663 aa31.43■■■□□ 2.62
GTF3A-204ENST00000438571 ABCC2Q92887 1545 aa31.38■■■□□ 2.61
GTF3A-204ENST00000438571 UGGT2Q9NYU1 1516 aa31.38■■■□□ 2.61
GTF3A-204ENST00000438571 AEBP2Q6ZN18 517 aaPredicted RBP31.37■■■□□ 2.61
GTF3A-204ENST00000438571 KIAA0556O60303 1618 aa31.37■■■□□ 2.61
GTF3A-204ENST00000438571 KDM6BO15054 1643 aa31.34■■■□□ 2.61
GTF3A-204ENST00000438571 PPRC1Q5VV67 1664 aaKnown RBP31.32■■■□□ 2.6
GTF3A-204ENST00000438571 UHRF1BP1LA0JNW5 1464 aa31.3■■■□□ 2.6
GTF3A-204ENST00000438571 UACAQ9BZF9 1416 aa31.27■■■□□ 2.6
GTF3A-204ENST00000438571 ZCCHC11Q5TAX3 1644 aaKnown RBP31.27■■■□□ 2.6
GTF3A-204ENST00000438571 ASXL2Q76L83 1435 aa31.26■■■□□ 2.6
GTF3A-204ENST00000438571 GLI2P10070 1586 aa31.22■■■□□ 2.59
GTF3A-204ENST00000438571 PLB1Q6P1J6 1458 aa31.19■■■□□ 2.58
GTF3A-204ENST00000438571 KDM5BQ9UGL1 1544 aa31.19■■■□□ 2.58
GTF3A-204ENST00000438571 PRXQ9BXM0 1461 aa31.15■■■□□ 2.58
GTF3A-204ENST00000438571 MAP3K4Q9Y6R4 1608 aa31.14■■■□□ 2.58
GTF3A-204ENST00000438571 EPRSP07814 1512 aaKnown RBP31.1■■■□□ 2.57
GTF3A-204ENST00000438571 ABCA8O94911 1581 aa31.05■■■□□ 2.56
GTF3A-204ENST00000438571 GOLGA3Q08378 1498 aa31.02■■■□□ 2.56
GTF3A-204ENST00000438571 WDR7Q9Y4E6 1490 aa30.96■■■□□ 2.55
GTF3A-204ENST00000438571 COL17A1Q9UMD9 1497 aaPredicted RBP30.95■■■□□ 2.55
GTF3A-204ENST00000438571 KDM4FA0A1W2PPD8 638 aa30.91■■■□□ 2.54
GTF3A-204ENST00000438571 CFAP43Q8NDM7 1665 aa30.9■■■□□ 2.54
GTF3A-204ENST00000438571 SAMD9Q5K651 1589 aa30.88■■■□□ 2.53
GTF3A-204ENST00000438571 TEX14Q8IWB6 1497 aa30.87■■■□□ 2.53
GTF3A-204ENST00000438571 P3H3Q8IVL6 736 aa30.81■■■□□ 2.52
GTF3A-204ENST00000438571 CSRNP3Q8WYN3 585 aa30.8■■■□□ 2.52
GTF3A-204ENST00000438571 RAPGEF6Q8TEU7 1601 aa30.76■■■□□ 2.51
GTF3A-204ENST00000438571 ARID3CA6NKF2 412 aa30.75■■■□□ 2.51
GTF3A-204ENST00000438571 MAGI3Q5TCQ9 1506 aa30.74■■■□□ 2.51
GTF3A-204ENST00000438571 ADGRL1O94910 1474 aa30.74■■■□□ 2.51
GTF3A-204ENST00000438571 KCNH8Q96L42 1107 aa30.73■■■□□ 2.51
GTF3A-204ENST00000438571 CD109Q6YHK3 1445 aa30.73■■■□□ 2.51
GTF3A-204ENST00000438571 ATP10BO94823 1461 aa30.72■■■□□ 2.51
GTF3A-204ENST00000438571 EEA1Q15075 1411 aa30.7■■■□□ 2.5
GTF3A-204ENST00000438571 ABCA9Q8IUA7 1624 aa30.65■■■□□ 2.5
GTF3A-204ENST00000438571 KIF21BO75037 1637 aa30.64■■■□□ 2.5
GTF3A-204ENST00000438571 FAM9AQ8IZU1 332 aaPredicted RBP30.63■■■□□ 2.49
GTF3A-204ENST00000438571 FHOD3Q2V2M9 1422 aa30.62■■■□□ 2.49
GTF3A-204ENST00000438571 RANGAP1P46060 587 aaPredicted RBP30.6■■■□□ 2.49
GTF3A-204ENST00000438571 NUP153P49790 1475 aaKnown RBP30.58■■■□□ 2.49
GTF3A-204ENST00000438571 ARAP3Q8WWN8 1544 aa30.49■■■□□ 2.47
GTF3A-204ENST00000438571 EFCAB5A4FU69 1503 aa30.48■■■□□ 2.47
GTF3A-204ENST00000438571 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP30.43■■■□□ 2.46
GTF3A-204ENST00000438571 HNRNPUL2Q1KMD3 747 aaKnown RBP30.43■■■□□ 2.46
GTF3A-204ENST00000438571 FRMPD1Q5SYB0 1578 aa30.43■■■□□ 2.46
GTF3A-204ENST00000438571 EHMT2Q96KQ7 1210 aa30.38■■■□□ 2.45
GTF3A-204ENST00000438571 HECW2Q9P2P5 1572 aa30.37■■■□□ 2.45
GTF3A-204ENST00000438571 NEO1Q92859 1461 aa30.36■■■□□ 2.45
GTF3A-204ENST00000438571 TTC37Q6PGP7 1564 aa30.36■■■□□ 2.45
GTF3A-204ENST00000438571 CDK13Q14004 1512 aaKnown RBP30.35■■■□□ 2.45
GTF3A-204ENST00000438571 RICTORQ6R327 1708 aa30.33■■■□□ 2.45
GTF3A-204ENST00000438571 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.32■■■□□ 2.442e-7■■■■□ 26.2
GTF3A-204ENST00000438571 CHIC1Q5VXU3 224 aa30.31■■■□□ 2.44
GTF3A-204ENST00000438571 RAPGEF3O95398 923 aa30.29■■■□□ 2.44
GTF3A-204ENST00000438571 PHLDB1Q86UU1 1377 aa30.28■■■□□ 2.44
GTF3A-204ENST00000438571 ADAMTSL3P82987 1691 aa30.27■■■□□ 2.44
GTF3A-204ENST00000438571 LRRIQ1Q96JM4 1722 aa30.27■■■□□ 2.44
GTF3A-204ENST00000438571 ARHGAP35Q9NRY4 1499 aa30.25■■■□□ 2.43
GTF3A-204ENST00000438571 CFAP74Q9C0B2 1584 aa30.25■■■□□ 2.43
GTF3A-204ENST00000438571 HECW1Q76N89 1606 aa30.23■■■□□ 2.43
GTF3A-204ENST00000438571 PLEKHD1A6NEE1 506 aa30.23■■■□□ 2.43
GTF3A-204ENST00000438571 BCORL1Q5H9F3 1711 aa30.22■■■□□ 2.43
GTF3A-204ENST00000438571 UBTFP17480 764 aaKnown RBP30.21■■■□□ 2.43
GTF3A-204ENST00000438571 ARHGEF40Q8TER5 1519 aa30.2■■■□□ 2.42
GTF3A-204ENST00000438571 FANCAO15360 1455 aa30.19■■■□□ 2.42
GTF3A-204ENST00000438571 SIGLEC1Q9BZZ2 1709 aa30.17■■■□□ 2.42
GTF3A-204ENST00000438571 AKNAQ7Z591 1439 aa30.17■■■□□ 2.42
GTF3A-204ENST00000438571 MADDQ8WXG6 1647 aa30.16■■■□□ 2.42
GTF3A-204ENST00000438571 MYO5CQ9NQX4 1742 aa30.15■■■□□ 2.42
GTF3A-204ENST00000438571 KIF14Q15058 1648 aa30.14■■■□□ 2.42
GTF3A-204ENST00000438571 DENND4BO75064 1496 aaPredicted RBP30.14■■■□□ 2.42
GTF3A-204ENST00000438571 FMN1Q68DA7 1419 aa30.12■■■□□ 2.41
GTF3A-204ENST00000438571 ZMYM4Q5VZL5 1548 aa30.1■■■□□ 2.41
GTF3A-204ENST00000438571 PTPRMP28827 1452 aa30.09■■■□□ 2.41
GTF3A-204ENST00000438571 RIMS1Q86UR5 1692 aaKnown RBP30.08■■■□□ 2.41
GTF3A-204ENST00000438571 ATP1B4Q9UN42 357 aaPredicted RBP30.06■■■□□ 2.4
GTF3A-204ENST00000438571 ZFYVE16Q7Z3T8 1539 aa30.03■■■□□ 2.4
GTF3A-204ENST00000438571 PCF11O94913 1555 aaKnown RBP30.03■■■□□ 2.4
GTF3A-204ENST00000438571 PLCH2O75038 1416 aa30.02■■■□□ 2.4
GTF3A-204ENST00000438571 YEATS2Q9ULM3 1422 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms