RNA–Protein interactions for RNA: ENST00000437100.5

CPNE1-215, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-215ENST00000437100 SHROOM2Q13796 1616 aa24.45■■□□□ 1.5
CPNE1-215ENST00000437100 ARHGEF11O15085 1522 aa24.4■■□□□ 1.5
CPNE1-215ENST00000437100 IQGAP2Q13576 1575 aa24.38■■□□□ 1.49
CPNE1-215ENST00000437100 GOLGA3Q08378 1498 aa24.37■■□□□ 1.49
CPNE1-215ENST00000437100 JPH4Q96JJ6 628 aa24.36■■□□□ 1.49
CPNE1-215ENST00000437100 CTTNBP2Q8WZ74 1663 aa24.34■■□□□ 1.49
CPNE1-215ENST00000437100 RIMBP3CA6NJZ7 1639 aa24.33■■□□□ 1.49
CPNE1-215ENST00000437100 RIMBP3BA6NNM3 1639 aa24.33■■□□□ 1.49
CPNE1-215ENST00000437100 RIMBP3Q9UFD9 1639 aa24.33■■□□□ 1.49
CPNE1-215ENST00000437100 UGGT2Q9NYU1 1516 aa24.31■■□□□ 1.48
CPNE1-215ENST00000437100 ERCC6L2Q5T890 1561 aa24.3■■□□□ 1.48
CPNE1-215ENST00000437100 PRG4Q92954 1404 aaPredicted RBP24.3■■□□□ 1.48
CPNE1-215ENST00000437100 ARAP1Q96P48 1450 aa24.25■■□□□ 1.47
CPNE1-215ENST00000437100 DISP1Q96F81 1524 aa24.24■■□□□ 1.47
CPNE1-215ENST00000437100 UBTFP17480 764 aaKnown RBP24.18■■□□□ 1.46
CPNE1-215ENST00000437100 CARMIL2Q6F5E8 1435 aa24.18■■□□□ 1.46
CPNE1-215ENST00000437100 EHMT2Q96KQ7 1210 aa24.17■■□□□ 1.46
CPNE1-215ENST00000437100 KIAA0556O60303 1618 aa24.16■■□□□ 1.46
CPNE1-215ENST00000437100 TNIKQ9UKE5 1360 aa24.14■■□□□ 1.45
CPNE1-215ENST00000437100 SAMD9Q5K651 1589 aa24.13■■□□□ 1.45
CPNE1-215ENST00000437100 EFCAB5A4FU69 1503 aa24.07■■□□□ 1.44
CPNE1-215ENST00000437100 CYB5RLQ6IPT4 315 aa24.07■■□□□ 1.44
CPNE1-215ENST00000437100 PTPRGP23470 1445 aa24.05■■□□□ 1.44
CPNE1-215ENST00000437100 LOC105371045A0A1W2PR82 267 aa24.03■■□□□ 1.44
CPNE1-215ENST00000437100 ARHGAP35Q9NRY4 1499 aa24.01■■□□□ 1.43
CPNE1-215ENST00000437100 FHOD3Q2V2M9 1422 aa23.97■■□□□ 1.43
CPNE1-215ENST00000437100 RANGAP1P46060 587 aaPredicted RBP23.96■■□□□ 1.43
CPNE1-215ENST00000437100 P3H3Q8IVL6 736 aa23.94■■□□□ 1.42
CPNE1-215ENST00000437100 UHRF1BP1LA0JNW5 1464 aa23.93■■□□□ 1.42
CPNE1-215ENST00000437100 CLIP1P30622 1438 aa23.93■■□□□ 1.42
CPNE1-215ENST00000437100 UACAQ9BZF9 1416 aa23.93■■□□□ 1.42
CPNE1-215ENST00000437100 CEP162Q5TB80 1403 aa23.91■■□□□ 1.42
CPNE1-215ENST00000437100 ADCY10Q96PN6 1610 aa23.91■■□□□ 1.42
CPNE1-215ENST00000437100 ABCA8O94911 1581 aa23.91■■□□□ 1.42
CPNE1-215ENST00000437100 PLB1Q6P1J6 1458 aa23.89■■□□□ 1.42
CPNE1-215ENST00000437100 ABCC2Q92887 1545 aa23.89■■□□□ 1.41
CPNE1-215ENST00000437100 TTBK1Q5TCY1 1321 aaPredicted RBP23.87■■□□□ 1.41
CPNE1-215ENST00000437100 FMN1Q68DA7 1419 aa23.82■■□□□ 1.4
CPNE1-215ENST00000437100 KDM5BQ9UGL1 1544 aa23.79■■□□□ 1.4
CPNE1-215ENST00000437100 RAPGEF6Q8TEU7 1601 aa23.78■■□□□ 1.4
CPNE1-215ENST00000437100 NUP153P49790 1475 aaKnown RBP23.75■■□□□ 1.39
CPNE1-215ENST00000437100 MAPKBP1O60336 1514 aa23.73■■□□□ 1.39
CPNE1-215ENST00000437100 ZCCHC11Q5TAX3 1644 aaKnown RBP23.7■■□□□ 1.38
CPNE1-215ENST00000437100 ATP10BO94823 1461 aa23.69■■□□□ 1.38
CPNE1-215ENST00000437100 CASKIN1Q8WXD9 1431 aa23.69■■□□□ 1.38
CPNE1-215ENST00000437100 NPM1P06748 294 aaKnown RBP eCLIP23.68■■□□□ 1.38
CPNE1-215ENST00000437100 PCF11O94913 1555 aaKnown RBP23.67■■□□□ 1.38
CPNE1-215ENST00000437100 HECW1Q76N89 1606 aa23.66■■□□□ 1.38
CPNE1-215ENST00000437100 FYCO1Q9BQS8 1478 aa23.65■■□□□ 1.38
CPNE1-215ENST00000437100 ASXL2Q76L83 1435 aa23.63■■□□□ 1.37
CPNE1-215ENST00000437100 VPS8Q8N3P4 1428 aa23.62■■□□□ 1.37
CPNE1-215ENST00000437100 EPRSP07814 1512 aaKnown RBP23.61■■□□□ 1.37
CPNE1-215ENST00000437100 CDK13Q14004 1512 aaKnown RBP23.59■■□□□ 1.37
CPNE1-215ENST00000437100 ABCC10Q5T3U5 1492 aa23.57■■□□□ 1.36
CPNE1-215ENST00000437100 WDR7Q9Y4E6 1490 aa23.57■■□□□ 1.36
CPNE1-215ENST00000437100 ARID3CA6NKF2 412 aa23.57■■□□□ 1.36
CPNE1-215ENST00000437100 CCDC18Q5T9S5 1454 aa23.55■■□□□ 1.36
CPNE1-215ENST00000437100 LRRIQ1Q96JM4 1722 aa23.54■■□□□ 1.36
CPNE1-215ENST00000437100 DIP2BQ9P265 1576 aa23.53■■□□□ 1.36
CPNE1-215ENST00000437100 ATP1B4Q9UN42 357 aaPredicted RBP23.5■■□□□ 1.35
CPNE1-215ENST00000437100 GLI2P10070 1586 aa23.48■■□□□ 1.35
CPNE1-215ENST00000437100 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.46■■□□□ 1.35
CPNE1-215ENST00000437100 HNRNPUL2Q1KMD3 747 aaKnown RBP23.46■■□□□ 1.35
CPNE1-215ENST00000437100 PLEKHD1A6NEE1 506 aa23.44■■□□□ 1.34
CPNE1-215ENST00000437100 KIF13AQ9H1H9 1805 aa23.44■■□□□ 1.34
CPNE1-215ENST00000437100 FAM69CQ0P6D2 419 aa23.43■■□□□ 1.34
CPNE1-215ENST00000437100 TROQ12816 1431 aaPredicted RBP23.42■■□□□ 1.34
CPNE1-215ENST00000437100 MAGI3Q5TCQ9 1506 aa23.42■■□□□ 1.34
CPNE1-215ENST00000437100 TRHP20396 242 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-215ENST00000437100 CDK11AQ9UQ88 783 aaPredicted RBP23.41■■□□□ 1.34
CPNE1-215ENST00000437100 MAP3K1Q13233 1512 aa23.4■■□□□ 1.34
CPNE1-215ENST00000437100 CFAP43Q8NDM7 1665 aa23.38■■□□□ 1.33
CPNE1-215ENST00000437100 TIAM1Q13009 1591 aa23.38■■□□□ 1.33
CPNE1-215ENST00000437100 KCNH8Q96L42 1107 aa23.36■■□□□ 1.33
CPNE1-215ENST00000437100 ABCA9Q8IUA7 1624 aa23.36■■□□□ 1.33
CPNE1-215ENST00000437100 MAP3K4Q9Y6R4 1608 aa23.35■■□□□ 1.33
CPNE1-215ENST00000437100 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.33■■□□□ 1.321e-38■■□□□ 13.2
CPNE1-215ENST00000437100 KIF14Q15058 1648 aa23.31■■□□□ 1.32
CPNE1-215ENST00000437100 EHBP1L1Q8N3D4 1523 aa23.31■■□□□ 1.32
CPNE1-215ENST00000437100 TTC37Q6PGP7 1564 aa23.29■■□□□ 1.32
CPNE1-215ENST00000437100 CD109Q6YHK3 1445 aa23.29■■□□□ 1.32
CPNE1-215ENST00000437100 LRRC9Q6ZRR7 1453 aa23.29■■□□□ 1.32
CPNE1-215ENST00000437100 MTUS2Q5JR59 1369 aa23.28■■□□□ 1.32
CPNE1-215ENST00000437100 PPRC1Q5VV67 1664 aaKnown RBP23.28■■□□□ 1.32
CPNE1-215ENST00000437100 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-215ENST00000437100 ARAP3Q8WWN8 1544 aa23.2■■□□□ 1.3
CPNE1-215ENST00000437100 TEX14Q8IWB6 1497 aa23.2■■□□□ 1.3
CPNE1-215ENST00000437100 PLCH2O75038 1416 aa23.2■■□□□ 1.3
CPNE1-215ENST00000437100 APLP2Q06481 763 aa23.19■■□□□ 1.3
CPNE1-215ENST00000437100 TSPOAP1O95153 1857 aa23.17■■□□□ 1.3
CPNE1-215ENST00000437100 NCOA2Q15596 1464 aa23.17■■□□□ 1.3
CPNE1-215ENST00000437100 GPATCH8Q9UKJ3 1502 aaKnown RBP23.15■■□□□ 1.3
CPNE1-215ENST00000437100 SUPT6HQ7KZ85 1726 aaKnown RBP23.14■■□□□ 1.3
CPNE1-215ENST00000437100 NEO1Q92859 1461 aa23.14■■□□□ 1.29
CPNE1-215ENST00000437100 PREX2Q70Z35 1606 aa23.13■■□□□ 1.29
CPNE1-215ENST00000437100 MYO5CQ9NQX4 1742 aa23.13■■□□□ 1.29
CPNE1-215ENST00000437100 FANCAO15360 1455 aa23.11■■□□□ 1.29
CPNE1-215ENST00000437100 PHLDB1Q86UU1 1377 aa23.11■■□□□ 1.29
CPNE1-215ENST00000437100 CCNB3Q8WWL7 1395 aa23.1■■□□□ 1.29
CPNE1-215ENST00000437100 CDC42BPAQ5VT25 1732 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms