RNA–Protein interactions for RNA: ENST00000435747.2

CPNE1-214, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-214ENST00000435747 ADAMTS12P58397 1594 aa19.39■□□□□ 0.69
CPNE1-214ENST00000435747 HECW2Q9P2P5 1572 aa19.38■□□□□ 0.69
CPNE1-214ENST00000435747 PRG4Q92954 1404 aaPredicted RBP19.36■□□□□ 0.69
CPNE1-214ENST00000435747 ADGRL1O94910 1474 aa19.35■□□□□ 0.69
CPNE1-214ENST00000435747 FHAD1B1AJZ9 1412 aa19.28■□□□□ 0.68
CPNE1-214ENST00000435747 FBXO41Q8TF61 875 aa19.28■□□□□ 0.68
CPNE1-214ENST00000435747 JPH4Q96JJ6 628 aa19.27■□□□□ 0.68
CPNE1-214ENST00000435747 ADCY10Q96PN6 1610 aa19.26■□□□□ 0.67
CPNE1-214ENST00000435747 WRNQ14191 1432 aaPredicted RBP eCLIP19.16■□□□□ 0.66
CPNE1-214ENST00000435747 ERICH3Q5RHP9 1530 aa19.15■□□□□ 0.66
CPNE1-214ENST00000435747 RUSC2Q8N2Y8 1516 aa19.13■□□□□ 0.65
CPNE1-214ENST00000435747 PPRC1Q5VV67 1664 aaKnown RBP19.11■□□□□ 0.65
CPNE1-214ENST00000435747 LMTK3Q96Q04 1460 aa19.07■□□□□ 0.64
CPNE1-214ENST00000435747 GLI2P10070 1586 aa19.03■□□□□ 0.64
CPNE1-214ENST00000435747 TOP2BQ02880 1626 aa19.02■□□□□ 0.64
CPNE1-214ENST00000435747 COL17A1Q9UMD9 1497 aaPredicted RBP19.02■□□□□ 0.63
CPNE1-214ENST00000435747 PLB1Q6P1J6 1458 aa18.99■□□□□ 0.63
CPNE1-214ENST00000435747 ASXL2Q76L83 1435 aa18.99■□□□□ 0.63
CPNE1-214ENST00000435747 BIVM-ERCC5R4GMW8 1640 aa18.97■□□□□ 0.63
CPNE1-214ENST00000435747 ABCC2Q92887 1545 aa18.95■□□□□ 0.62
CPNE1-214ENST00000435747 PTPRGP23470 1445 aa18.94■□□□□ 0.62
CPNE1-214ENST00000435747 TEX14Q8IWB6 1497 aa18.94■□□□□ 0.62
CPNE1-214ENST00000435747 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
CPNE1-214ENST00000435747 TTBK1Q5TCY1 1321 aaPredicted RBP18.93■□□□□ 0.62
CPNE1-214ENST00000435747 MAP3K4Q9Y6R4 1608 aa18.91■□□□□ 0.62
CPNE1-214ENST00000435747 CUL7Q14999 1698 aa18.91■□□□□ 0.62
CPNE1-214ENST00000435747 SOCS7O14512 581 aa18.88■□□□□ 0.61
CPNE1-214ENST00000435747 EPRSP07814 1512 aaKnown RBP18.86■□□□□ 0.61
CPNE1-214ENST00000435747 TNIKQ9UKE5 1360 aa18.83■□□□□ 0.61
CPNE1-214ENST00000435747 ILDR2Q71H61 639 aa18.81■□□□□ 0.6
CPNE1-214ENST00000435747 UHRF1BP1LA0JNW5 1464 aa18.81■□□□□ 0.6
CPNE1-214ENST00000435747 CARMIL2Q6F5E8 1435 aa18.8■□□□□ 0.6
CPNE1-214ENST00000435747 DISP3Q9P2K9 1392 aa18.79■□□□□ 0.6
CPNE1-214ENST00000435747 KIF21BO75037 1637 aa18.78■□□□□ 0.6
CPNE1-214ENST00000435747 UACAQ9BZF9 1416 aa18.76■□□□□ 0.59
CPNE1-214ENST00000435747 PTPRMP28827 1452 aa18.73■□□□□ 0.59
CPNE1-214ENST00000435747 KDM5BQ9UGL1 1544 aa18.73■□□□□ 0.59
CPNE1-214ENST00000435747 ZCCHC11Q5TAX3 1644 aaKnown RBP18.71■□□□□ 0.59
CPNE1-214ENST00000435747 PCF11O94913 1555 aaKnown RBP18.7■□□□□ 0.58
CPNE1-214ENST00000435747 IGF1RP08069 1367 aa18.67■□□□□ 0.58
CPNE1-214ENST00000435747 ADAMTSL3P82987 1691 aa18.66■□□□□ 0.58
CPNE1-214ENST00000435747 MAGI3Q5TCQ9 1506 aa18.66■□□□□ 0.58
CPNE1-214ENST00000435747 WDR7Q9Y4E6 1490 aa18.65■□□□□ 0.58
CPNE1-214ENST00000435747 CERKQ8TCT0 537 aa18.65■□□□□ 0.58
CPNE1-214ENST00000435747 CD109Q6YHK3 1445 aa18.65■□□□□ 0.58
CPNE1-214ENST00000435747 CFAP43Q8NDM7 1665 aa18.64■□□□□ 0.57
CPNE1-214ENST00000435747 IQGAP2Q13576 1575 aa18.64■□□□□ 0.57
CPNE1-214ENST00000435747 DISP1Q96F81 1524 aa18.59■□□□□ 0.57
CPNE1-214ENST00000435747 KIF27Q86VH2 1401 aa18.58■□□□□ 0.57
CPNE1-214ENST00000435747 SPATA31D1Q6ZQQ2 1576 aa18.57■□□□□ 0.56
CPNE1-214ENST00000435747 SUPT5HO00267 1087 aaKnown RBP18.57■□□□□ 0.56
CPNE1-214ENST00000435747 MADDQ8WXG6 1647 aa18.56■□□□□ 0.56
CPNE1-214ENST00000435747 KCNH8Q96L42 1107 aa18.55■□□□□ 0.56
CPNE1-214ENST00000435747 CARMIL1Q5VZK9 1371 aa18.55■□□□□ 0.56
CPNE1-214ENST00000435747 BCORL1Q5H9F3 1711 aa18.54■□□□□ 0.56
CPNE1-214ENST00000435747 HSPA2P54652 639 aa18.54■□□□□ 0.56
CPNE1-214ENST00000435747 ARAP3Q8WWN8 1544 aa18.54■□□□□ 0.56
CPNE1-214ENST00000435747 ARID4BQ4LE39 1312 aaPredicted RBP18.5■□□□□ 0.55
CPNE1-214ENST00000435747 RIMS1Q86UR5 1692 aaKnown RBP18.48■□□□□ 0.55
CPNE1-214ENST00000435747 KIAA0556O60303 1618 aa18.48■□□□□ 0.55
CPNE1-214ENST00000435747 UGGT2Q9NYU1 1516 aa18.46■□□□□ 0.55
CPNE1-214ENST00000435747 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
CPNE1-214ENST00000435747 PHLDB1Q86UU1 1377 aa18.42■□□□□ 0.54
CPNE1-214ENST00000435747 RAPGEF3O95398 923 aa18.4■□□□□ 0.54
CPNE1-214ENST00000435747 ABCA8O94911 1581 aa18.35■□□□□ 0.53
CPNE1-214ENST00000435747 FRMPD1Q5SYB0 1578 aa18.32■□□□□ 0.52
CPNE1-214ENST00000435747 ARHGEF40Q8TER5 1519 aa18.31■□□□□ 0.52
CPNE1-214ENST00000435747 NEO1Q92859 1461 aa18.31■□□□□ 0.52
CPNE1-214ENST00000435747 ABCA9Q8IUA7 1624 aa18.31■□□□□ 0.52
CPNE1-214ENST00000435747 POGZQ7Z3K3 1410 aa18.3■□□□□ 0.52
CPNE1-214ENST00000435747 DMRT2Q9Y5R5 561 aa18.28■□□□□ 0.52
CPNE1-214ENST00000435747 RAPGEF2Q9Y4G8 1499 aa18.27■□□□□ 0.52
CPNE1-214ENST00000435747 GOLGA3Q08378 1498 aa18.26■□□□□ 0.51
CPNE1-214ENST00000435747 YEATS2Q9ULM3 1422 aa18.26■□□□□ 0.51
CPNE1-214ENST00000435747 FANCAO15360 1455 aa18.26■□□□□ 0.51
CPNE1-214ENST00000435747 ARID3CA6NKF2 412 aa18.24■□□□□ 0.51
CPNE1-214ENST00000435747 FER1L4A9Z1Z3 1794 aa18.24■□□□□ 0.51
CPNE1-214ENST00000435747 PREX1Q8TCU6 1659 aa18.23■□□□□ 0.51
CPNE1-214ENST00000435747 STRCQ7RTU9 1775 aa18.22■□□□□ 0.51
CPNE1-214ENST00000435747 TTC37Q6PGP7 1564 aa18.21■□□□□ 0.51
CPNE1-214ENST00000435747 AKNAQ7Z591 1439 aa18.21■□□□□ 0.51
CPNE1-214ENST00000435747 CTTNBP2Q8WZ74 1663 aa18.21■□□□□ 0.51
CPNE1-214ENST00000435747 RICTORQ6R327 1708 aa18.2■□□□□ 0.5
CPNE1-214ENST00000435747 MLECQ14165 292 aa18.19■□□□□ 0.5
CPNE1-214ENST00000435747 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
CPNE1-214ENST00000435747 ATP10BO94823 1461 aa18.19■□□□□ 0.5
CPNE1-214ENST00000435747 SIGLEC1Q9BZZ2 1709 aa18.17■□□□□ 0.5
CPNE1-214ENST00000435747 FAM9AQ8IZU1 332 aaPredicted RBP18.16■□□□□ 0.5
CPNE1-214ENST00000435747 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.5
CPNE1-214ENST00000435747 FHOD3Q2V2M9 1422 aa18.14■□□□□ 0.49
CPNE1-214ENST00000435747 EFCAB5A4FU69 1503 aa18.13■□□□□ 0.49
CPNE1-214ENST00000435747 ZFYVE16Q7Z3T8 1539 aa18.13■□□□□ 0.49
CPNE1-214ENST00000435747 SETD1BQ9UPS6 1966 aaKnown RBP18.13■□□□□ 0.49
CPNE1-214ENST00000435747 PTPRTO14522 1441 aa18.12■□□□□ 0.49
CPNE1-214ENST00000435747 ZMYM4Q5VZL5 1548 aa18.11■□□□□ 0.49
CPNE1-214ENST00000435747 LTBP4Q8N2S1 1624 aa18.1■□□□□ 0.49
CPNE1-214ENST00000435747 UHRF1BP1Q6BDS2 1440 aa18.1■□□□□ 0.49
CPNE1-214ENST00000435747 CFAP74Q9C0B2 1584 aa18.08■□□□□ 0.49
CPNE1-214ENST00000435747 CEBPAP49715 358 aaPredicted RBP18.08■□□□□ 0.48
CPNE1-214ENST00000435747 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms