RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 EHMT2Q96KQ7 1210 aa26.9■■□□□ 1.9
CTDSPL-204ENST00000435525 CLASP1Q7Z460 1538 aa26.88■■□□□ 1.89
CTDSPL-204ENST00000435525 JPH4Q96JJ6 628 aa26.85■■□□□ 1.89
CTDSPL-204ENST00000435525 DNAJC5Q9H3Z4 198 aa26.83■■□□□ 1.89
CTDSPL-204ENST00000435525 IQGAP2Q13576 1575 aa26.8■■□□□ 1.88
CTDSPL-204ENST00000435525 CTTNBP2Q8WZ74 1663 aa26.73■■□□□ 1.87
CTDSPL-204ENST00000435525 CARMIL2Q6F5E8 1435 aa26.73■■□□□ 1.87
CTDSPL-204ENST00000435525 PRG4Q92954 1404 aaPredicted RBP26.73■■□□□ 1.87
CTDSPL-204ENST00000435525 TNIKQ9UKE5 1360 aa26.7■■□□□ 1.86
CTDSPL-204ENST00000435525 SHROOM2Q13796 1616 aa26.68■■□□□ 1.86
CTDSPL-204ENST00000435525 UGGT2Q9NYU1 1516 aa26.67■■□□□ 1.86
CTDSPL-204ENST00000435525 LOC105371045A0A1W2PR82 267 aa26.65■■□□□ 1.86
CTDSPL-204ENST00000435525 RANGAP1P46060 587 aaPredicted RBP26.65■■□□□ 1.86
CTDSPL-204ENST00000435525 ARHGEF11O15085 1522 aa26.65■■□□□ 1.86
CTDSPL-204ENST00000435525 RIMBP3CA6NJZ7 1639 aa26.54■■□□□ 1.84
CTDSPL-204ENST00000435525 RIMBP3BA6NNM3 1639 aa26.54■■□□□ 1.84
CTDSPL-204ENST00000435525 RIMBP3Q9UFD9 1639 aa26.54■■□□□ 1.84
CTDSPL-204ENST00000435525 DISP1Q96F81 1524 aa26.54■■□□□ 1.84
CTDSPL-204ENST00000435525 EFCAB5A4FU69 1503 aa26.53■■□□□ 1.84
CTDSPL-204ENST00000435525 PTPRGP23470 1445 aa26.51■■□□□ 1.83
CTDSPL-204ENST00000435525 KIAA0556O60303 1618 aa26.5■■□□□ 1.83
CTDSPL-204ENST00000435525 P3H3Q8IVL6 736 aa26.5■■□□□ 1.83
CTDSPL-204ENST00000435525 ERCC6L2Q5T890 1561 aa26.49■■□□□ 1.83
CTDSPL-204ENST00000435525 CLIP1P30622 1438 aa26.48■■□□□ 1.83
CTDSPL-204ENST00000435525 TTBK1Q5TCY1 1321 aaPredicted RBP26.48■■□□□ 1.83
CTDSPL-204ENST00000435525 CYB5RLQ6IPT4 315 aa26.47■■□□□ 1.83
CTDSPL-204ENST00000435525 SAMD9Q5K651 1589 aa26.45■■□□□ 1.82
CTDSPL-204ENST00000435525 ARAP1Q96P48 1450 aa26.44■■□□□ 1.82
CTDSPL-204ENST00000435525 CEP162Q5TB80 1403 aa26.44■■□□□ 1.82
CTDSPL-204ENST00000435525 ARHGAP35Q9NRY4 1499 aa26.39■■□□□ 1.82
CTDSPL-204ENST00000435525 FHOD3Q2V2M9 1422 aa26.39■■□□□ 1.81
CTDSPL-204ENST00000435525 FMN1Q68DA7 1419 aa26.34■■□□□ 1.81
CTDSPL-204ENST00000435525 UACAQ9BZF9 1416 aa26.31■■□□□ 1.8
CTDSPL-204ENST00000435525 NPM1P06748 294 aaKnown RBP eCLIP26.3■■□□□ 1.8
CTDSPL-204ENST00000435525 UHRF1BP1LA0JNW5 1464 aa26.23■■□□□ 1.79
CTDSPL-204ENST00000435525 PLB1Q6P1J6 1458 aa26.22■■□□□ 1.79
CTDSPL-204ENST00000435525 ABCC2Q92887 1545 aa26.21■■□□□ 1.79
CTDSPL-204ENST00000435525 ATP1B4Q9UN42 357 aaPredicted RBP26.21■■□□□ 1.79
CTDSPL-204ENST00000435525 ABCA8O94911 1581 aa26.18■■□□□ 1.78
CTDSPL-204ENST00000435525 RAPGEF6Q8TEU7 1601 aa26.14■■□□□ 1.78
CTDSPL-204ENST00000435525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.13■■□□□ 1.77
CTDSPL-204ENST00000435525 HNRNPUL2Q1KMD3 747 aaKnown RBP26.13■■□□□ 1.77
CTDSPL-204ENST00000435525 CASKIN1Q8WXD9 1431 aa26.13■■□□□ 1.77
CTDSPL-204ENST00000435525 ADCY10Q96PN6 1610 aa26.12■■□□□ 1.77
CTDSPL-204ENST00000435525 VPS8Q8N3P4 1428 aa26.11■■□□□ 1.77
CTDSPL-204ENST00000435525 FYCO1Q9BQS8 1478 aa26.09■■□□□ 1.77
CTDSPL-204ENST00000435525 HECW1Q76N89 1606 aa26.08■■□□□ 1.77
CTDSPL-204ENST00000435525 KDM5BQ9UGL1 1544 aa26.08■■□□□ 1.77
CTDSPL-204ENST00000435525 ARID3CA6NKF2 412 aa26.07■■□□□ 1.76
CTDSPL-204ENST00000435525 NUP153P49790 1475 aaKnown RBP26.05■■□□□ 1.76
CTDSPL-204ENST00000435525 CDK11AQ9UQ88 783 aaPredicted RBP26.05■■□□□ 1.76
CTDSPL-204ENST00000435525 APLP2Q06481 763 aa26.03■■□□□ 1.76
CTDSPL-204ENST00000435525 PCF11O94913 1555 aaKnown RBP26.02■■□□□ 1.76
CTDSPL-204ENST00000435525 ATP10BO94823 1461 aa26.01■■□□□ 1.75
CTDSPL-204ENST00000435525 CCDC18Q5T9S5 1454 aa26.01■■□□□ 1.75
CTDSPL-204ENST00000435525 PLEKHD1A6NEE1 506 aa25.99■■□□□ 1.75
CTDSPL-204ENST00000435525 EPRSP07814 1512 aaKnown RBP25.98■■□□□ 1.75
CTDSPL-204ENST00000435525 ZCCHC11Q5TAX3 1644 aaKnown RBP25.96■■□□□ 1.75
CTDSPL-204ENST00000435525 MAPKBP1O60336 1514 aa25.95■■□□□ 1.74
CTDSPL-204ENST00000435525 ASXL2Q76L83 1435 aa25.95■■□□□ 1.74
CTDSPL-204ENST00000435525 CDK13Q14004 1512 aaKnown RBP25.91■■□□□ 1.74
CTDSPL-204ENST00000435525 WDR7Q9Y4E6 1490 aa25.89■■□□□ 1.73
CTDSPL-204ENST00000435525 TRHP20396 242 aaPredicted RBP25.86■■□□□ 1.73
CTDSPL-204ENST00000435525 KCNH8Q96L42 1107 aa25.86■■□□□ 1.73
CTDSPL-204ENST00000435525 MTUS2Q5JR59 1369 aa25.83■■□□□ 1.73
CTDSPL-204ENST00000435525 FAM69CQ0P6D2 419 aa25.81■■□□□ 1.72
CTDSPL-204ENST00000435525 MAP3K1Q13233 1512 aa25.81■■□□□ 1.72
CTDSPL-204ENST00000435525 TROQ12816 1431 aaPredicted RBP25.8■■□□□ 1.72
CTDSPL-204ENST00000435525 ABCC10Q5T3U5 1492 aa25.8■■□□□ 1.72
CTDSPL-204ENST00000435525 TIAM1Q13009 1591 aa25.76■■□□□ 1.71
CTDSPL-204ENST00000435525 LRRIQ1Q96JM4 1722 aa25.71■■□□□ 1.71
CTDSPL-204ENST00000435525 EHBP1L1Q8N3D4 1523 aa25.71■■□□□ 1.71
CTDSPL-204ENST00000435525 CFAP43Q8NDM7 1665 aa25.71■■□□□ 1.71
CTDSPL-204ENST00000435525 DIP2BQ9P265 1576 aa25.69■■□□□ 1.7
CTDSPL-204ENST00000435525 LRRC9Q6ZRR7 1453 aa25.69■■□□□ 1.7
CTDSPL-204ENST00000435525 GLI2P10070 1586 aa25.69■■□□□ 1.7
CTDSPL-204ENST00000435525 KIF14Q15058 1648 aa25.68■■□□□ 1.7
CTDSPL-204ENST00000435525 CD109Q6YHK3 1445 aa25.64■■□□□ 1.7
CTDSPL-204ENST00000435525 KANK4Q5T7N3 995 aaPredicted RBP25.64■■□□□ 1.7
CTDSPL-204ENST00000435525 MAGI3Q5TCQ9 1506 aa25.63■■□□□ 1.69
CTDSPL-204ENST00000435525 CCNB3Q8WWL7 1395 aa25.59■■□□□ 1.69
CTDSPL-204ENST00000435525 ABCA9Q8IUA7 1624 aa25.59■■□□□ 1.69
CTDSPL-204ENST00000435525 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.58■■□□□ 1.69
CTDSPL-204ENST00000435525 TEX14Q8IWB6 1497 aa25.56■■□□□ 1.68
CTDSPL-204ENST00000435525 SUPT6HQ7KZ85 1726 aaKnown RBP25.55■■□□□ 1.68
CTDSPL-204ENST00000435525 NCOA2Q15596 1464 aa25.54■■□□□ 1.68
CTDSPL-204ENST00000435525 EFCAB2Q5VUJ9 269 aa25.53■■□□□ 1.68
CTDSPL-204ENST00000435525 PLCH2O75038 1416 aa25.53■■□□□ 1.68
CTDSPL-204ENST00000435525 MAP3K4Q9Y6R4 1608 aa25.52■■□□□ 1.68
CTDSPL-204ENST00000435525 KIF13AQ9H1H9 1805 aa25.52■■□□□ 1.68
CTDSPL-204ENST00000435525 TTC37Q6PGP7 1564 aa25.51■■□□□ 1.67
CTDSPL-204ENST00000435525 CFDP1Q9UEE9 299 aaPredicted RBP25.5■■□□□ 1.67
CTDSPL-204ENST00000435525 PHLDB1Q86UU1 1377 aa25.49■■□□□ 1.67
CTDSPL-204ENST00000435525 PPARGC1BQ86YN6 1023 aaKnown RBP25.47■■□□□ 1.67
CTDSPL-204ENST00000435525 ARAP3Q8WWN8 1544 aa25.47■■□□□ 1.67
CTDSPL-204ENST00000435525 ARHGAP5Q13017 1502 aa25.46■■□□□ 1.67
CTDSPL-204ENST00000435525 GPATCH8Q9UKJ3 1502 aaKnown RBP25.45■■□□□ 1.66
CTDSPL-204ENST00000435525 FANCAO15360 1455 aa25.44■■□□□ 1.66
CTDSPL-204ENST00000435525 NEO1Q92859 1461 aa25.44■■□□□ 1.66
CTDSPL-204ENST00000435525 MYO5CQ9NQX4 1742 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms