RNA–Protein interactions for RNA: ENST00000434333.1

HLA-B-250, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 863 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-250ENST00000434333 CUL7Q14999 1698 aa35.05■■■■□ 3.2
HLA-B-250ENST00000434333 JPH4Q96JJ6 628 aa35.05■■■■□ 3.2
HLA-B-250ENST00000434333 KIAA0586Q9BVV6 1533 aa34.93■■■■□ 3.18
HLA-B-250ENST00000434333 CARMIL1Q5VZK9 1371 aa34.87■■■■□ 3.17
HLA-B-250ENST00000434333 ADCY10Q96PN6 1610 aa34.68■■■■□ 3.14
HLA-B-250ENST00000434333 KIF13AQ9H1H9 1805 aa34.66■■■■□ 3.14
HLA-B-250ENST00000434333 IQGAP2Q13576 1575 aa34.63■■■■□ 3.13
HLA-B-250ENST00000434333 RAPGEF2Q9Y4G8 1499 aa34.59■■■■□ 3.13
HLA-B-250ENST00000434333 MAPKBP1O60336 1514 aa34.59■■■■□ 3.13
HLA-B-250ENST00000434333 PTPRGP23470 1445 aa34.53■■■■□ 3.12
HLA-B-250ENST00000434333 CARMIL2Q6F5E8 1435 aa34.52■■■■□ 3.12
HLA-B-250ENST00000434333 ABCC10Q5T3U5 1492 aa34.52■■■■□ 3.12
HLA-B-250ENST00000434333 NPM1P06748 294 aaKnown RBP eCLIP34.51■■■■□ 3.12
HLA-B-250ENST00000434333 TNIKQ9UKE5 1360 aa34.49■■■■□ 3.11
HLA-B-250ENST00000434333 DISP1Q96F81 1524 aa34.48■■■■□ 3.11
HLA-B-250ENST00000434333 DIP2BQ9P265 1576 aa34.46■■■■□ 3.11
HLA-B-250ENST00000434333 UGGT2Q9NYU1 1516 aa34.45■■■■□ 3.1
HLA-B-250ENST00000434333 FAM69CQ0P6D2 419 aa34.41■■■■□ 3.1
HLA-B-250ENST00000434333 TTBK1Q5TCY1 1321 aaPredicted RBP34.39■■■■□ 3.1
HLA-B-250ENST00000434333 ABCC2Q92887 1545 aa34.35■■■■□ 3.09
HLA-B-250ENST00000434333 KIAA0556O60303 1618 aa34.33■■■■□ 3.09
HLA-B-250ENST00000434333 UHRF1BP1LA0JNW5 1464 aa34.33■■■■□ 3.09
HLA-B-250ENST00000434333 PRXQ9BXM0 1461 aa34.33■■■■□ 3.09
HLA-B-250ENST00000434333 CTTNBP2Q8WZ74 1663 aa34.33■■■■□ 3.09
HLA-B-250ENST00000434333 UACAQ9BZF9 1416 aa34.3■■■■□ 3.08
HLA-B-250ENST00000434333 ASXL2Q76L83 1435 aa34.2■■■■□ 3.06
HLA-B-250ENST00000434333 KDM5BQ9UGL1 1544 aa34.19■■■■□ 3.06
HLA-B-250ENST00000434333 PLB1Q6P1J6 1458 aa34.17■■■■□ 3.06
HLA-B-250ENST00000434333 TSPOAP1O95153 1857 aa34.15■■■■□ 3.06
HLA-B-250ENST00000434333 GOLGA3Q08378 1498 aa34.12■■■■□ 3.05
HLA-B-250ENST00000434333 GLI2P10070 1586 aa34.11■■■■□ 3.05
HLA-B-250ENST00000434333 ZCCHC11Q5TAX3 1644 aaKnown RBP34.11■■■■□ 3.05
HLA-B-250ENST00000434333 KDM6BO15054 1643 aa34.07■■■■□ 3.04
HLA-B-250ENST00000434333 PPRC1Q5VV67 1664 aaKnown RBP34.04■■■■□ 3.04
HLA-B-250ENST00000434333 CSRNP3Q8WYN3 585 aa34.04■■■■□ 3.04
HLA-B-250ENST00000434333 EPRSP07814 1512 aaKnown RBP34.02■■■■□ 3.04
HLA-B-250ENST00000434333 ABCA8O94911 1581 aa34.02■■■■□ 3.04
HLA-B-250ENST00000434333 AEBP2Q6ZN18 517 aaPredicted RBP34■■■■□ 3.03
HLA-B-250ENST00000434333 EEA1Q15075 1411 aa33.96■■■■□ 3.03
HLA-B-250ENST00000434333 MAP3K4Q9Y6R4 1608 aa33.94■■■■□ 3.02
HLA-B-250ENST00000434333 WDR7Q9Y4E6 1490 aa33.91■■■■□ 3.02
HLA-B-250ENST00000434333 SAMD9Q5K651 1589 aa33.88■■■■□ 3.01
HLA-B-250ENST00000434333 P3H3Q8IVL6 736 aa33.82■■■■□ 3
HLA-B-250ENST00000434333 COL17A1Q9UMD9 1497 aaPredicted RBP33.78■■■■□ 3
HLA-B-250ENST00000434333 TEX14Q8IWB6 1497 aa33.76■■■■□ 3
HLA-B-250ENST00000434333 FAM9AQ8IZU1 332 aaPredicted RBP33.75■■■□□ 2.99
HLA-B-250ENST00000434333 KIF21BO75037 1637 aa33.73■■■□□ 2.99
HLA-B-250ENST00000434333 ATP10BO94823 1461 aa33.71■■■□□ 2.99
HLA-B-250ENST00000434333 CFAP43Q8NDM7 1665 aa33.71■■■□□ 2.99
HLA-B-250ENST00000434333 RAPGEF6Q8TEU7 1601 aa33.67■■■□□ 2.98
HLA-B-250ENST00000434333 MAGI3Q5TCQ9 1506 aa33.66■■■□□ 2.98
HLA-B-250ENST00000434333 KCNH8Q96L42 1107 aa33.66■■■□□ 2.98
HLA-B-250ENST00000434333 CD109Q6YHK3 1445 aa33.65■■■□□ 2.98
HLA-B-250ENST00000434333 KDM4FA0A1W2PPD8 638 aa33.64■■■□□ 2.98
HLA-B-250ENST00000434333 ARID3CA6NKF2 412 aa33.64■■■□□ 2.98
HLA-B-250ENST00000434333 CHIC1Q5VXU3 224 aa33.63■■■□□ 2.97
HLA-B-250ENST00000434333 FHOD3Q2V2M9 1422 aa33.62■■■□□ 2.97
HLA-B-250ENST00000434333 RANGAP1P46060 587 aaPredicted RBP33.58■■■□□ 2.97
HLA-B-250ENST00000434333 NUP153P49790 1475 aaKnown RBP33.56■■■□□ 2.96
HLA-B-250ENST00000434333 EFCAB5A4FU69 1503 aa33.54■■■□□ 2.96
HLA-B-250ENST00000434333 ABCA9Q8IUA7 1624 aa33.51■■■□□ 2.96
HLA-B-250ENST00000434333 ADGRL1O94910 1474 aa33.42■■■□□ 2.94
HLA-B-250ENST00000434333 ARAP3Q8WWN8 1544 aa33.39■■■□□ 2.94
HLA-B-250ENST00000434333 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP33.39■■■□□ 2.94
HLA-B-250ENST00000434333 HNRNPUL2Q1KMD3 747 aaKnown RBP33.39■■■□□ 2.94
HLA-B-250ENST00000434333 EHMT2Q96KQ7 1210 aa33.37■■■□□ 2.93
HLA-B-250ENST00000434333 UBTFP17480 764 aaKnown RBP33.34■■■□□ 2.93
HLA-B-250ENST00000434333 ARHGAP35Q9NRY4 1499 aa33.31■■■□□ 2.92
HLA-B-250ENST00000434333 PHLDB1Q86UU1 1377 aa33.29■■■□□ 2.92
HLA-B-250ENST00000434333 NEO1Q92859 1461 aa33.28■■■□□ 2.92
HLA-B-250ENST00000434333 PLEKHD1A6NEE1 506 aa33.26■■■□□ 2.91
HLA-B-250ENST00000434333 CDK13Q14004 1512 aaKnown RBP33.25■■■□□ 2.91
HLA-B-250ENST00000434333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP33.22■■■□□ 2.91
HLA-B-250ENST00000434333 FMN1Q68DA7 1419 aa33.2■■■□□ 2.91
HLA-B-250ENST00000434333 FRMPD1Q5SYB0 1578 aa33.18■■■□□ 2.9
HLA-B-250ENST00000434333 TTC37Q6PGP7 1564 aa33.17■■■□□ 2.9
HLA-B-250ENST00000434333 HECW1Q76N89 1606 aa33.17■■■□□ 2.9
HLA-B-250ENST00000434333 RAPGEF3O95398 923 aa33.15■■■□□ 2.9
HLA-B-250ENST00000434333 FANCAO15360 1455 aa33.09■■■□□ 2.89
HLA-B-250ENST00000434333 AKNAQ7Z591 1439 aa33.07■■■□□ 2.88
HLA-B-250ENST00000434333 CFAP74Q9C0B2 1584 aa33.07■■■□□ 2.88
HLA-B-250ENST00000434333 RICTORQ6R327 1708 aa33.05■■■□□ 2.88
HLA-B-250ENST00000434333 LRRIQ1Q96JM4 1722 aa33.03■■■□□ 2.88
HLA-B-250ENST00000434333 ATP1B4Q9UN42 357 aaPredicted RBP33.03■■■□□ 2.88
HLA-B-250ENST00000434333 DENND4BO75064 1496 aaPredicted RBP33.03■■■□□ 2.88
HLA-B-250ENST00000434333 PLCH2O75038 1416 aa32.98■■■□□ 2.87
HLA-B-250ENST00000434333 KIF14Q15058 1648 aa32.96■■■□□ 2.87
HLA-B-250ENST00000434333 ARHGEF40Q8TER5 1519 aa32.96■■■□□ 2.87
HLA-B-250ENST00000434333 ADAMTSL3P82987 1691 aa32.94■■■□□ 2.86
HLA-B-250ENST00000434333 PCF11O94913 1555 aaKnown RBP32.94■■■□□ 2.86
HLA-B-250ENST00000434333 TROQ12816 1431 aaPredicted RBP32.94■■■□□ 2.86
HLA-B-250ENST00000434333 ZMYM4Q5VZL5 1548 aa32.93■■■□□ 2.86
HLA-B-250ENST00000434333 CDK11AQ9UQ88 783 aaPredicted RBP32.92■■■□□ 2.86
HLA-B-250ENST00000434333 MYO5CQ9NQX4 1742 aa32.91■■■□□ 2.86
HLA-B-250ENST00000434333 HECW2Q9P2P5 1572 aa32.91■■■□□ 2.86
HLA-B-250ENST00000434333 CASKIN1Q8WXD9 1431 aa32.9■■■□□ 2.86
HLA-B-250ENST00000434333 BCORL1Q5H9F3 1711 aa32.88■■■□□ 2.85
HLA-B-250ENST00000434333 SCAPERQ9BY12 1400 aa32.85■■■□□ 2.85
HLA-B-250ENST00000434333 POGZQ7Z3K3 1410 aa32.84■■■□□ 2.85
HLA-B-250ENST00000434333 CCDC18Q5T9S5 1454 aa32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms