RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 WDR97A6NE52 1622 aa21.39■■□□□ 1.01
TMCO3-202ENST00000434316 FAM50AQ14320 339 aaKnown RBP21.37■■□□□ 1.01
TMCO3-202ENST00000434316 BCANQ96GW7 911 aa21.37■■□□□ 1.01
TMCO3-202ENST00000434316 LRRC9Q6ZRR7 1453 aa21.37■■□□□ 1.01
TMCO3-202ENST00000434316 MAP3K1Q13233 1512 aa21.35■■□□□ 1.01
TMCO3-202ENST00000434316 CARMIL1Q5VZK9 1371 aa21.33■■□□□ 1.01
TMCO3-202ENST00000434316 P3H3Q8IVL6 736 aa21.32■■□□□ 1
TMCO3-202ENST00000434316 HIRIP3Q9BW71 556 aaPredicted RBP21.31■■□□□ 1
TMCO3-202ENST00000434316 ATP1B4Q9UN42 357 aaPredicted RBP21.29■■□□□ 1
TMCO3-202ENST00000434316 FKBP8Q14318 412 aa21.28■■□□□ 1
TMCO3-202ENST00000434316 PPP1R15AO75807 674 aaPredicted RBP21.27■■□□□ 1
TMCO3-202ENST00000434316 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
TMCO3-202ENST00000434316 PCF11O94913 1555 aaKnown RBP21.24■□□□□ 0.99
TMCO3-202ENST00000434316 PRDM2Q13029 1718 aa21.23■□□□□ 0.99
TMCO3-202ENST00000434316 FHAD1B1AJZ9 1412 aa21.22■□□□□ 0.99
TMCO3-202ENST00000434316 CFAP43Q8NDM7 1665 aa21.22■□□□□ 0.99
TMCO3-202ENST00000434316 ANP32EQ9BTT0 268 aa21.19■□□□□ 0.98
TMCO3-202ENST00000434316 FHOD3Q2V2M9 1422 aa21.18■□□□□ 0.98
TMCO3-202ENST00000434316 TRIM52Q96A61 297 aa21.18■□□□□ 0.98
TMCO3-202ENST00000434316 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
TMCO3-202ENST00000434316 TIMELESSQ9UNS1 1208 aa21.15■□□□□ 0.98
TMCO3-202ENST00000434316 ANP32CO43423 234 aa21.12■□□□□ 0.97
TMCO3-202ENST00000434316 CCER2I3L3R5 266 aa21.1■□□□□ 0.97
TMCO3-202ENST00000434316 NEFLP07196 543 aa21.09■□□□□ 0.97
TMCO3-202ENST00000434316 FYCO1Q9BQS8 1478 aa21.07■□□□□ 0.96
TMCO3-202ENST00000434316 CASKIN1Q8WXD9 1431 aa21.05■□□□□ 0.96
TMCO3-202ENST00000434316 TONSLQ96HA7 1378 aa21.05■□□□□ 0.96
TMCO3-202ENST00000434316 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
TMCO3-202ENST00000434316 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.03■□□□□ 0.966e-8■■■■■ 30.4
TMCO3-202ENST00000434316 FGD6Q6ZV73 1430 aa21.02■□□□□ 0.96
TMCO3-202ENST00000434316 CCDC18Q5T9S5 1454 aa21.01■□□□□ 0.95
TMCO3-202ENST00000434316 RBM19Q9Y4C8 960 aaKnown RBP21.01■□□□□ 0.95
TMCO3-202ENST00000434316 PTPRKQ15262 1439 aa21.01■□□□□ 0.95
TMCO3-202ENST00000434316 EFCAB5A4FU69 1503 aa20.99■□□□□ 0.95
TMCO3-202ENST00000434316 FANCD2Q9BXW9 1451 aa20.99■□□□□ 0.95
TMCO3-202ENST00000434316 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.955e-6■■□□□ 12.1
TMCO3-202ENST00000434316 MTUS2Q5JR59 1369 aa20.94■□□□□ 0.94
TMCO3-202ENST00000434316 UACAQ9BZF9 1416 aa20.94■□□□□ 0.94
TMCO3-202ENST00000434316 HFM1A2PYH4 1435 aa20.94■□□□□ 0.94
TMCO3-202ENST00000434316 ABCA10Q8WWZ4 1543 aa20.94■□□□□ 0.94
TMCO3-202ENST00000434316 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
TMCO3-202ENST00000434316 POLA1P09884 1462 aaPredicted RBP20.93■□□□□ 0.94
TMCO3-202ENST00000434316 SNAPC4Q5SXM2 1469 aa20.92■□□□□ 0.94
TMCO3-202ENST00000434316 CTTNBP2Q8WZ74 1663 aa20.91■□□□□ 0.94
TMCO3-202ENST00000434316 FMN1Q68DA7 1419 aa20.91■□□□□ 0.94
TMCO3-202ENST00000434316 DNMBPQ6XZF7 1577 aa20.9■□□□□ 0.94
TMCO3-202ENST00000434316 NAIPQ13075 1403 aa20.89■□□□□ 0.94
TMCO3-202ENST00000434316 TOPBP1Q92547 1522 aa20.89■□□□□ 0.93
TMCO3-202ENST00000434316 HNRNPUQ00839 825 aaKnown RBP eCLIP20.88■□□□□ 0.93
TMCO3-202ENST00000434316 CC2D2AQ9P2K1 1620 aa20.88■□□□□ 0.93
TMCO3-202ENST00000434316 KDM5BQ9UGL1 1544 aa20.88■□□□□ 0.93
TMCO3-202ENST00000434316 CUL7Q14999 1698 aa20.87■□□□□ 0.93
TMCO3-202ENST00000434316 IRX6P78412 446 aaPredicted RBP20.86■□□□□ 0.93
TMCO3-202ENST00000434316 LRRIQ1Q96JM4 1722 aa20.86■□□□□ 0.93
TMCO3-202ENST00000434316 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
TMCO3-202ENST00000434316 MYOM3Q5VTT5 1437 aa20.83■□□□□ 0.93
TMCO3-202ENST00000434316 NESP48681 1621 aa20.81■□□□□ 0.92
TMCO3-202ENST00000434316 RRP7BPQ9NSQ0 103 aa20.81■□□□□ 0.92
TMCO3-202ENST00000434316 WASHC2AQ641Q2 1341 aa20.81■□□□□ 0.92
TMCO3-202ENST00000434316 HSPA5P11021 654 aaKnown RBP20.81■□□□□ 0.92
TMCO3-202ENST00000434316 MSH5O43196 834 aa20.79■□□□□ 0.92
TMCO3-202ENST00000434316 CHIC2Q9UKJ5 165 aa20.79■□□□□ 0.92
TMCO3-202ENST00000434316 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
TMCO3-202ENST00000434316 SAMD9Q5K651 1589 aa20.77■□□□□ 0.92
TMCO3-202ENST00000434316 TDRD9Q8NDG6 1382 aaKnown RBP20.75■□□□□ 0.91
TMCO3-202ENST00000434316 SUPT6HQ7KZ85 1726 aaKnown RBP20.75■□□□□ 0.91
TMCO3-202ENST00000434316 CCDC184Q52MB2 194 aa20.75■□□□□ 0.91
TMCO3-202ENST00000434316 DENND4BO75064 1496 aaPredicted RBP20.74■□□□□ 0.91
TMCO3-202ENST00000434316 BCL11AQ9H165 835 aa20.74■□□□□ 0.91
TMCO3-202ENST00000434316 MAGI3Q5TCQ9 1506 aa20.72■□□□□ 0.91
TMCO3-202ENST00000434316 EHBP1L1Q8N3D4 1523 aa20.72■□□□□ 0.91
TMCO3-202ENST00000434316 UGGT2Q9NYU1 1516 aa20.71■□□□□ 0.91
TMCO3-202ENST00000434316 KDM6BO15054 1643 aa20.69■□□□□ 0.9
TMCO3-202ENST00000434316 EIF4G2P78344 907 aaKnown RBP eCLIP20.69■□□□□ 0.99e-8■■■■■ 59.8
TMCO3-202ENST00000434316 CDK11AQ9UQ88 783 aaPredicted RBP20.69■□□□□ 0.9
TMCO3-202ENST00000434316 URB2Q14146 1524 aaKnown RBP20.69■□□□□ 0.9
TMCO3-202ENST00000434316 C11orf95C9JLR9 678 aaPredicted RBP20.67■□□□□ 0.9
TMCO3-202ENST00000434316 FOXD1Q16676 465 aa20.67■□□□□ 0.9
TMCO3-202ENST00000434316 THOC2Q8NI27 1593 aaKnown RBP20.67■□□□□ 0.9
TMCO3-202ENST00000434316 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
TMCO3-202ENST00000434316 CNTLNQ9NXG0 1405 aa20.65■□□□□ 0.9
TMCO3-202ENST00000434316 L3MBTL2Q969R5 705 aa20.65■□□□□ 0.9
TMCO3-202ENST00000434316 HECW1Q76N89 1606 aa20.65■□□□□ 0.9
TMCO3-202ENST00000434316 ABCA5Q8WWZ7 1642 aa20.65■□□□□ 0.9
TMCO3-202ENST00000434316 GAPVD1Q14C86 1478 aa20.65■□□□□ 0.9
TMCO3-202ENST00000434316 GCC2Q8IWJ2 1684 aa20.64■□□□□ 0.89
TMCO3-202ENST00000434316 MPHOSPH9Q99550 1183 aa20.63■□□□□ 0.89
TMCO3-202ENST00000434316 FANCIQ9NVI1 1328 aa20.63■□□□□ 0.89
TMCO3-202ENST00000434316 FAM9BQ8IZU0 186 aa20.62■□□□□ 0.89
TMCO3-202ENST00000434316 TCOF1Q13428 1488 aaKnown RBP20.62■□□□□ 0.89
TMCO3-202ENST00000434316 ARID3CA6NKF2 412 aa20.6■□□□□ 0.89
TMCO3-202ENST00000434316 PRKRIP1Q9H875 184 aaPredicted RBP20.6■□□□□ 0.89
TMCO3-202ENST00000434316 CCDC7Q96M83 1385 aa20.59■□□□□ 0.89
TMCO3-202ENST00000434316 PPP4R2Q9NY27 417 aa20.58■□□□□ 0.89
TMCO3-202ENST00000434316 NCOA1Q15788 1441 aa20.58■□□□□ 0.88
TMCO3-202ENST00000434316 MRS2Q9HD23 443 aa20.58■□□□□ 0.88
TMCO3-202ENST00000434316 NBPF8Q3BBV2 869 aa20.57■□□□□ 0.88
TMCO3-202ENST00000434316 LAMC3Q9Y6N6 1575 aa20.57■□□□□ 0.88
TMCO3-202ENST00000434316 AKNAQ7Z591 1439 aa20.55■□□□□ 0.88
TMCO3-202ENST00000434316 B4GALNT3Q6L9W6 998 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms