RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 VPS8Q8N3P4 1428 aa10.37□□□□□ -0.75
SYNPO2-203ENST00000434046 NESP48681 1621 aa10.36□□□□□ -0.75
SYNPO2-203ENST00000434046 LAMC3Q9Y6N6 1575 aa10.36□□□□□ -0.75
SYNPO2-203ENST00000434046 PDS5BQ9NTI5 1447 aa10.36□□□□□ -0.75
SYNPO2-203ENST00000434046 CARMIL1Q5VZK9 1371 aa10.36□□□□□ -0.75
SYNPO2-203ENST00000434046 SYNJ1O43426 1573 aa10.36□□□□□ -0.75
SYNPO2-203ENST00000434046 PRKCSHP14314 528 aaPredicted RBP10.36□□□□□ -0.75
SYNPO2-203ENST00000434046 ARID3CA6NKF2 412 aa10.35□□□□□ -0.75
SYNPO2-203ENST00000434046 DEKP35659 375 aaKnown RBP10.32□□□□□ -0.76
SYNPO2-203ENST00000434046 RTL5Q5HYW3 569 aaPredicted RBP10.32□□□□□ -0.76
SYNPO2-203ENST00000434046 CFTRP13569 1480 aa10.31□□□□□ -0.76
SYNPO2-203ENST00000434046 HNRNPUQ00839 825 aaKnown RBP eCLIP10.3□□□□□ -0.76
SYNPO2-203ENST00000434046 MSH5O43196 834 aa10.29□□□□□ -0.76
SYNPO2-203ENST00000434046 FANCD2Q9BXW9 1451 aa10.29□□□□□ -0.76
SYNPO2-203ENST00000434046 KANK4Q5T7N3 995 aaPredicted RBP10.27□□□□□ -0.76
SYNPO2-203ENST00000434046 DHX57Q6P158 1386 aaKnown RBP10.27□□□□□ -0.77
SYNPO2-203ENST00000434046 MYT1LQ9UL68 1186 aa10.27□□□□□ -0.77
SYNPO2-203ENST00000434046 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
SYNPO2-203ENST00000434046 MTUS2Q5JR59 1369 aa10.26□□□□□ -0.77
SYNPO2-203ENST00000434046 TOP2BQ02880 1626 aa10.25□□□□□ -0.77
SYNPO2-203ENST00000434046 CNGB1Q14028 1251 aaPredicted RBP10.25□□□□□ -0.77
SYNPO2-203ENST00000434046 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
SYNPO2-203ENST00000434046 FGD5Q6ZNL6 1462 aa10.24□□□□□ -0.77
SYNPO2-203ENST00000434046 KIF21BO75037 1637 aa10.23□□□□□ -0.77
SYNPO2-203ENST00000434046 CUX1P39880 1505 aa10.23□□□□□ -0.77
SYNPO2-203ENST00000434046 IGF1RP08069 1367 aa10.23□□□□□ -0.77
SYNPO2-203ENST00000434046 SIN3AQ96ST3 1273 aa10.22□□□□□ -0.77
SYNPO2-203ENST00000434046 FHAD1B1AJZ9 1412 aa10.22□□□□□ -0.77
SYNPO2-203ENST00000434046 CHMP7Q8WUX9 453 aaPredicted RBP10.21□□□□□ -0.77
SYNPO2-203ENST00000434046 MRC2Q9UBG0 1479 aa10.21□□□□□ -0.78
SYNPO2-203ENST00000434046 ANO8Q9HCE9 1232 aaPredicted RBP10.21□□□□□ -0.78
SYNPO2-203ENST00000434046 CCNB3Q8WWL7 1395 aa10.2□□□□□ -0.78
SYNPO2-203ENST00000434046 FANCIQ9NVI1 1328 aa10.19□□□□□ -0.78
SYNPO2-203ENST00000434046 B4GALNT3Q6L9W6 998 aa10.19□□□□□ -0.78
SYNPO2-203ENST00000434046 KIF21AQ7Z4S6 1674 aa10.19□□□□□ -0.78
SYNPO2-203ENST00000434046 RAD54L2Q9Y4B4 1467 aa10.19□□□□□ -0.78
SYNPO2-203ENST00000434046 ANP32AP39687 249 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-203ENST00000434046 CCDC136Q96JN2 1154 aa10.18□□□□□ -0.78
SYNPO2-203ENST00000434046 PRXQ9BXM0 1461 aa10.18□□□□□ -0.78
SYNPO2-203ENST00000434046 NOP58Q9Y2X3 529 aaKnown RBP10.18□□□□□ -0.78
SYNPO2-203ENST00000434046 CHIC2Q9UKJ5 165 aa10.17□□□□□ -0.78
SYNPO2-203ENST00000434046 NPM2Q86SE8 214 aaKnown RBP10.16□□□□□ -0.78
SYNPO2-203ENST00000434046 ZNF777Q9ULD5 760 aaPredicted RBP10.16□□□□□ -0.78
SYNPO2-203ENST00000434046 ERICH3Q5RHP9 1530 aa10.16□□□□□ -0.78
SYNPO2-203ENST00000434046 EIF5BO60841 1220 aaKnown RBP10.16□□□□□ -0.78
SYNPO2-203ENST00000434046 FAM9BQ8IZU0 186 aa10.15□□□□□ -0.78
SYNPO2-203ENST00000434046 THOC2Q8NI27 1593 aaKnown RBP10.15□□□□□ -0.78
SYNPO2-203ENST00000434046 FHOD3Q2V2M9 1422 aa10.15□□□□□ -0.79
SYNPO2-203ENST00000434046 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.14□□□□□ -0.79
SYNPO2-203ENST00000434046 CCER2I3L3R5 266 aa10.14□□□□□ -0.79
SYNPO2-203ENST00000434046 PPP4R2Q9NY27 417 aa10.14□□□□□ -0.79
SYNPO2-203ENST00000434046 ZBTB47Q9UFB7 747 aaPredicted RBP10.14□□□□□ -0.79
SYNPO2-203ENST00000434046 WDR62O43379 1518 aa10.13□□□□□ -0.79
SYNPO2-203ENST00000434046 PRDM2Q13029 1718 aa10.13□□□□□ -0.79
SYNPO2-203ENST00000434046 ARAP1Q96P48 1450 aa10.11□□□□□ -0.79
SYNPO2-203ENST00000434046 POLR3GLQ9BT43 218 aa10.11□□□□□ -0.79
SYNPO2-203ENST00000434046 SALL2Q9Y467 1007 aaPredicted RBP10.11□□□□□ -0.79
SYNPO2-203ENST00000434046 FMN1Q68DA7 1419 aa10.11□□□□□ -0.79
SYNPO2-203ENST00000434046 TONSLQ96HA7 1378 aa10.1□□□□□ -0.79
SYNPO2-203ENST00000434046 URB2Q14146 1524 aaKnown RBP10.1□□□□□ -0.79
SYNPO2-203ENST00000434046 RRP7BPQ9NSQ0 103 aa10.1□□□□□ -0.79
SYNPO2-203ENST00000434046 TOPBP1Q92547 1522 aa10.1□□□□□ -0.79
SYNPO2-203ENST00000434046 BIVM-ERCC5R4GMW8 1640 aa10.09□□□□□ -0.79
SYNPO2-203ENST00000434046 GAPVD1Q14C86 1478 aa10.09□□□□□ -0.79
SYNPO2-203ENST00000434046 RAB3GAP2Q9H2M9 1393 aa10.09□□□□□ -0.79
SYNPO2-203ENST00000434046 SENP3-EIF4A1A0A087X0R7 540 aa10.09□□□□□ -0.79
SYNPO2-203ENST00000434046 ARHGAP35Q9NRY4 1499 aa10.09□□□□□ -0.79
SYNPO2-203ENST00000434046 POLA1P09884 1462 aaPredicted RBP10.08□□□□□ -0.8
SYNPO2-203ENST00000434046 PPP1R15AO75807 674 aaPredicted RBP10.07□□□□□ -0.8
SYNPO2-203ENST00000434046 PAK3O75914 559 aaPredicted RBP10.07□□□□□ -0.8
SYNPO2-203ENST00000434046 LAS1LQ9Y4W2 734 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-203ENST00000434046 DNMBPQ6XZF7 1577 aa10.06□□□□□ -0.8
SYNPO2-203ENST00000434046 ZNF326Q5BKZ1 582 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-203ENST00000434046 IL27Q8NEV9 243 aa10.05□□□□□ -0.8
SYNPO2-203ENST00000434046 MRS2Q9HD23 443 aa10.05□□□□□ -0.8
SYNPO2-203ENST00000434046 DAXXQ9UER7 740 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2-203ENST00000434046 SETD5Q9C0A6 1442 aa10.05□□□□□ -0.8
SYNPO2-203ENST00000434046 IFT140Q96RY7 1462 aa10.03□□□□□ -0.8
SYNPO2-203ENST00000434046 PLEKHD1A6NEE1 506 aa10.03□□□□□ -0.8
SYNPO2-203ENST00000434046 NEFMP07197 916 aa10.02□□□□□ -0.81
SYNPO2-203ENST00000434046 AQRO60306 1485 aaKnown RBP eCLIP10.02□□□□□ -0.81
SYNPO2-203ENST00000434046 CFDP1Q9UEE9 299 aaPredicted RBP10.01□□□□□ -0.81
SYNPO2-203ENST00000434046 ERICH6BQ5W0A0 696 aa10.01□□□□□ -0.81
SYNPO2-203ENST00000434046 ABCA10Q8WWZ4 1543 aa10.01□□□□□ -0.81
SYNPO2-203ENST00000434046 TSPY4P0CV99 314 aa10□□□□□ -0.81
SYNPO2-203ENST00000434046 TSPY10P0CW01 314 aa10□□□□□ -0.81
SYNPO2-203ENST00000434046 IPO9Q96P70 1041 aaKnown RBP9.99□□□□□ -0.81
SYNPO2-203ENST00000434046 LRRC9Q6ZRR7 1453 aa9.98□□□□□ -0.81
SYNPO2-203ENST00000434046 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
SYNPO2-203ENST00000434046 WDR97A6NE52 1622 aa9.98□□□□□ -0.81
SYNPO2-203ENST00000434046 PHLDB1Q86UU1 1377 aa9.98□□□□□ -0.81
SYNPO2-203ENST00000434046 RRBP1Q9P2E9 1410 aaKnown RBP9.96□□□□□ -0.82
SYNPO2-203ENST00000434046 CASKIN1Q8WXD9 1431 aa9.95□□□□□ -0.82
SYNPO2-203ENST00000434046 CARMIL2Q6F5E8 1435 aa9.95□□□□□ -0.82
SYNPO2-203ENST00000434046 JPH4Q96JJ6 628 aa9.95□□□□□ -0.82
SYNPO2-203ENST00000434046 TIMELESSQ9UNS1 1208 aa9.94□□□□□ -0.82
SYNPO2-203ENST00000434046 GRIN2BQ13224 1484 aa9.93□□□□□ -0.82
SYNPO2-203ENST00000434046 ZNF608Q9ULD9 1512 aaPredicted RBP9.93□□□□□ -0.82
SYNPO2-203ENST00000434046 EFCAB5A4FU69 1503 aa9.93□□□□□ -0.82
SYNPO2-203ENST00000434046 EIF4G2P78344 907 aaKnown RBP eCLIP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms