RNA–Protein interactions for RNA: ENST00000434030.1

SEMA3B-205, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 1,011 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-205ENST00000434030 PRG4Q92954 1404 aaPredicted RBP37.99■■■■□ 3.67
SEMA3B-205ENST00000434030 CARMIL1Q5VZK9 1371 aa37.99■■■■□ 3.67
SEMA3B-205ENST00000434030 TRHP20396 242 aaPredicted RBP37.97■■■■□ 3.67
SEMA3B-205ENST00000434030 KIAA0586Q9BVV6 1533 aa37.92■■■■□ 3.66
SEMA3B-205ENST00000434030 RAPGEF2Q9Y4G8 1499 aa37.71■■■■□ 3.63
SEMA3B-205ENST00000434030 IQGAP2Q13576 1575 aa37.65■■■■□ 3.62
SEMA3B-205ENST00000434030 ADCY10Q96PN6 1610 aa37.52■■■■□ 3.6
SEMA3B-205ENST00000434030 CARMIL2Q6F5E8 1435 aa37.52■■■■□ 3.6
SEMA3B-205ENST00000434030 PTPRGP23470 1445 aa37.47■■■■□ 3.59
SEMA3B-205ENST00000434030 CTTNBP2Q8WZ74 1663 aa37.46■■■■□ 3.59
SEMA3B-205ENST00000434030 TNIKQ9UKE5 1360 aa37.44■■■■□ 3.58
SEMA3B-205ENST00000434030 NPM1P06748 294 aaKnown RBP eCLIP37.44■■■■□ 3.58
SEMA3B-205ENST00000434030 KIF13AQ9H1H9 1805 aa37.44■■■■□ 3.58
SEMA3B-205ENST00000434030 PRXQ9BXM0 1461 aa37.44■■■■□ 3.58
SEMA3B-205ENST00000434030 DISP1Q96F81 1524 aa37.42■■■■□ 3.58
SEMA3B-205ENST00000434030 UGGT2Q9NYU1 1516 aa37.42■■■■□ 3.58
SEMA3B-205ENST00000434030 TTBK1Q5TCY1 1321 aaPredicted RBP37.39■■■■□ 3.58
SEMA3B-205ENST00000434030 MAPKBP1O60336 1514 aa37.35■■■■□ 3.57
SEMA3B-205ENST00000434030 KIAA0556O60303 1618 aa37.3■■■■□ 3.56
SEMA3B-205ENST00000434030 CSRNP3Q8WYN3 585 aa37.3■■■■□ 3.56
SEMA3B-205ENST00000434030 ABCC10Q5T3U5 1492 aa37.25■■■■□ 3.55
SEMA3B-205ENST00000434030 EEA1Q15075 1411 aa37.21■■■■□ 3.55
SEMA3B-205ENST00000434030 UACAQ9BZF9 1416 aa37.2■■■■□ 3.55
SEMA3B-205ENST00000434030 ABCC2Q92887 1545 aa37.2■■■■□ 3.55
SEMA3B-205ENST00000434030 UHRF1BP1LA0JNW5 1464 aa37.2■■■■□ 3.54
SEMA3B-205ENST00000434030 FAM69CQ0P6D2 419 aa37.19■■■■□ 3.54
SEMA3B-205ENST00000434030 DIP2BQ9P265 1576 aa37.19■■■■□ 3.54
SEMA3B-205ENST00000434030 GOLGA3Q08378 1498 aa37.14■■■■□ 3.54
SEMA3B-205ENST00000434030 CHIC1Q5VXU3 224 aa37.08■■■■□ 3.53
SEMA3B-205ENST00000434030 FAM9AQ8IZU1 332 aaPredicted RBP37.07■■■■□ 3.52
SEMA3B-205ENST00000434030 KDM5BQ9UGL1 1544 aa37.03■■■■□ 3.52
SEMA3B-205ENST00000434030 ASXL2Q76L83 1435 aa37.02■■■■□ 3.52
SEMA3B-205ENST00000434030 TSPOAP1O95153 1857 aa37.02■■■■□ 3.52
SEMA3B-205ENST00000434030 ZCCHC11Q5TAX3 1644 aaKnown RBP37■■■■□ 3.51
SEMA3B-205ENST00000434030 PLB1Q6P1J6 1458 aa36.99■■■■□ 3.51
SEMA3B-205ENST00000434030 ABCA8O94911 1581 aa36.93■■■■□ 3.5
SEMA3B-205ENST00000434030 KIF21BO75037 1637 aa36.92■■■■□ 3.5
SEMA3B-205ENST00000434030 P3H3Q8IVL6 736 aa36.9■■■■□ 3.5
SEMA3B-205ENST00000434030 SAMD9Q5K651 1589 aa36.89■■■■□ 3.5
SEMA3B-205ENST00000434030 GLI2P10070 1586 aa36.88■■■■□ 3.49
SEMA3B-205ENST00000434030 EPRSP07814 1512 aaKnown RBP36.8■■■■□ 3.48
SEMA3B-205ENST00000434030 PPRC1Q5VV67 1664 aaKnown RBP36.77■■■■□ 3.48
SEMA3B-205ENST00000434030 RANGAP1P46060 587 aaPredicted RBP36.75■■■■□ 3.47
SEMA3B-205ENST00000434030 WDR7Q9Y4E6 1490 aa36.74■■■■□ 3.47
SEMA3B-205ENST00000434030 KDM6BO15054 1643 aa36.74■■■■□ 3.47
SEMA3B-205ENST00000434030 MAP3K4Q9Y6R4 1608 aa36.73■■■■□ 3.47
SEMA3B-205ENST00000434030 RAPGEF6Q8TEU7 1601 aa36.66■■■■□ 3.46
SEMA3B-205ENST00000434030 EHMT2Q96KQ7 1210 aa36.64■■■■□ 3.46
SEMA3B-205ENST00000434030 ATP10BO94823 1461 aa36.62■■■■□ 3.45
SEMA3B-205ENST00000434030 FHOD3Q2V2M9 1422 aa36.62■■■■□ 3.45
SEMA3B-205ENST00000434030 UBTFP17480 764 aaKnown RBP36.61■■■■□ 3.45
SEMA3B-205ENST00000434030 ARID3CA6NKF2 412 aa36.6■■■■□ 3.45
SEMA3B-205ENST00000434030 EFCAB5A4FU69 1503 aa36.59■■■■□ 3.45
SEMA3B-205ENST00000434030 KCNH8Q96L42 1107 aa36.59■■■■□ 3.45
SEMA3B-205ENST00000434030 CFAP43Q8NDM7 1665 aa36.55■■■■□ 3.44
SEMA3B-205ENST00000434030 TEX14Q8IWB6 1497 aa36.53■■■■□ 3.44
SEMA3B-205ENST00000434030 NUP153P49790 1475 aaKnown RBP36.49■■■■□ 3.43
SEMA3B-205ENST00000434030 CD109Q6YHK3 1445 aa36.47■■■■□ 3.43
SEMA3B-205ENST00000434030 COL17A1Q9UMD9 1497 aaPredicted RBP36.43■■■■□ 3.42
SEMA3B-205ENST00000434030 AEBP2Q6ZN18 517 aaPredicted RBP36.43■■■■□ 3.42
SEMA3B-205ENST00000434030 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP36.42■■■■□ 3.42
SEMA3B-205ENST00000434030 HNRNPUL2Q1KMD3 747 aaKnown RBP36.42■■■■□ 3.42
SEMA3B-205ENST00000434030 MAGI3Q5TCQ9 1506 aa36.42■■■■□ 3.42
SEMA3B-205ENST00000434030 ARHGAP35Q9NRY4 1499 aa36.36■■■■□ 3.41
SEMA3B-205ENST00000434030 ABCA9Q8IUA7 1624 aa36.35■■■■□ 3.41
SEMA3B-205ENST00000434030 FMN1Q68DA7 1419 aa36.25■■■■□ 3.39
SEMA3B-205ENST00000434030 PLEKHD1A6NEE1 506 aa36.25■■■■□ 3.39
SEMA3B-205ENST00000434030 CDK13Q14004 1512 aaKnown RBP36.19■■■■□ 3.38
SEMA3B-205ENST00000434030 HECW1Q76N89 1606 aa36.17■■■■□ 3.38
SEMA3B-205ENST00000434030 KDM4FA0A1W2PPD8 638 aa36.14■■■■□ 3.38
SEMA3B-205ENST00000434030 ATP1B4Q9UN42 357 aaPredicted RBP36.14■■■■□ 3.38
SEMA3B-205ENST00000434030 ARAP3Q8WWN8 1544 aa36.13■■■■□ 3.38
SEMA3B-205ENST00000434030 PHLDB1Q86UU1 1377 aa36.09■■■■□ 3.37
SEMA3B-205ENST00000434030 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP36.08■■■■□ 3.37
SEMA3B-205ENST00000434030 LRRIQ1Q96JM4 1722 aa36.08■■■■□ 3.37
SEMA3B-205ENST00000434030 NEO1Q92859 1461 aa36.07■■■■□ 3.37
SEMA3B-205ENST00000434030 TTC37Q6PGP7 1564 aa36.02■■■■□ 3.36
SEMA3B-205ENST00000434030 CDK11AQ9UQ88 783 aaPredicted RBP35.96■■■■□ 3.35
SEMA3B-205ENST00000434030 ADGRL1O94910 1474 aa35.95■■■■□ 3.35
SEMA3B-205ENST00000434030 CLIP1P30622 1438 aa35.95■■■■□ 3.35
SEMA3B-205ENST00000434030 PCF11O94913 1555 aaKnown RBP35.94■■■■□ 3.34
SEMA3B-205ENST00000434030 CASKIN1Q8WXD9 1431 aa35.93■■■■□ 3.34
SEMA3B-205ENST00000434030 RAPGEF3O95398 923 aa35.93■■■■□ 3.34
SEMA3B-205ENST00000434030 CFAP74Q9C0B2 1584 aa35.93■■■■□ 3.34
SEMA3B-205ENST00000434030 FANCAO15360 1455 aa35.92■■■■□ 3.34
SEMA3B-205ENST00000434030 AKNAQ7Z591 1439 aa35.89■■■■□ 3.34
SEMA3B-205ENST00000434030 FRMPD1Q5SYB0 1578 aa35.88■■■■□ 3.33
SEMA3B-205ENST00000434030 KIF14Q15058 1648 aa35.87■■■■□ 3.33
SEMA3B-205ENST00000434030 TROQ12816 1431 aaPredicted RBP35.86■■■■□ 3.33
SEMA3B-205ENST00000434030 MYO5CQ9NQX4 1742 aa35.86■■■■□ 3.33
SEMA3B-205ENST00000434030 RICTORQ6R327 1708 aa35.85■■■■□ 3.33
SEMA3B-205ENST00000434030 PLCH2O75038 1416 aa35.84■■■■□ 3.33
SEMA3B-205ENST00000434030 CCDC18Q5T9S5 1454 aa35.83■■■■□ 3.33
SEMA3B-205ENST00000434030 DENND4BO75064 1496 aaPredicted RBP35.8■■■■□ 3.32
SEMA3B-205ENST00000434030 FYCO1Q9BQS8 1478 aa35.8■■■■□ 3.32
SEMA3B-205ENST00000434030 EFCAB2Q5VUJ9 269 aa35.69■■■■□ 3.3
SEMA3B-205ENST00000434030 CDC42BPBQ9Y5S2 1711 aa35.68■■■■□ 3.3
SEMA3B-205ENST00000434030 CEP162Q5TB80 1403 aa35.66■■■■□ 3.3
SEMA3B-205ENST00000434030 SCAPERQ9BY12 1400 aa35.66■■■■□ 3.3
SEMA3B-205ENST00000434030 ZMYM4Q5VZL5 1548 aa35.65■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms