RNA–Protein interactions for RNA: ENST00000432597.3

SYCE1-204, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYCE1, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-204ENST00000432597 CARMIL1Q5VZK9 1371 aa39.67■■■■□ 3.94
SYCE1-204ENST00000432597 PRG4Q92954 1404 aaPredicted RBP39.65■■■■□ 3.94
SYCE1-204ENST00000432597 TRHP20396 242 aaPredicted RBP39.58■■■■□ 3.93
SYCE1-204ENST00000432597 KIAA0586Q9BVV6 1533 aa39.56■■■■□ 3.92
SYCE1-204ENST00000432597 RAPGEF2Q9Y4G8 1499 aa39.37■■■■□ 3.89
SYCE1-204ENST00000432597 IQGAP2Q13576 1575 aa39.28■■■■□ 3.88
SYCE1-204ENST00000432597 CARMIL2Q6F5E8 1435 aa39.17■■■■□ 3.86
SYCE1-204ENST00000432597 PRXQ9BXM0 1461 aa39.11■■■■□ 3.85
SYCE1-204ENST00000432597 PTPRGP23470 1445 aa39.1■■■■□ 3.85
SYCE1-204ENST00000432597 ADCY10Q96PN6 1610 aa39.1■■■■□ 3.85
SYCE1-204ENST00000432597 TTBK1Q5TCY1 1321 aaPredicted RBP39.09■■■■□ 3.85
SYCE1-204ENST00000432597 TNIKQ9UKE5 1360 aa39.08■■■■□ 3.85
SYCE1-204ENST00000432597 NPM1P06748 294 aaKnown RBP eCLIP39.06■■■■□ 3.84
SYCE1-204ENST00000432597 DISP1Q96F81 1524 aa39.04■■■■□ 3.84
SYCE1-204ENST00000432597 UGGT2Q9NYU1 1516 aa39.04■■■■□ 3.84
SYCE1-204ENST00000432597 CTTNBP2Q8WZ74 1663 aa39.02■■■■□ 3.84
SYCE1-204ENST00000432597 CSRNP3Q8WYN3 585 aa38.97■■■■□ 3.83
SYCE1-204ENST00000432597 MAPKBP1O60336 1514 aa38.93■■■■□ 3.82
SYCE1-204ENST00000432597 KIAA0556O60303 1618 aa38.92■■■■□ 3.82
SYCE1-204ENST00000432597 EEA1Q15075 1411 aa38.9■■■■□ 3.82
SYCE1-204ENST00000432597 KIF13AQ9H1H9 1805 aa38.89■■■■□ 3.82
SYCE1-204ENST00000432597 ABCC10Q5T3U5 1492 aa38.83■■■■□ 3.81
SYCE1-204ENST00000432597 UACAQ9BZF9 1416 aa38.82■■■■□ 3.81
SYCE1-204ENST00000432597 ABCC2Q92887 1545 aa38.81■■■■□ 3.8
SYCE1-204ENST00000432597 FAM9AQ8IZU1 332 aaPredicted RBP38.8■■■■□ 3.8
SYCE1-204ENST00000432597 UHRF1BP1LA0JNW5 1464 aa38.79■■■■□ 3.8
SYCE1-204ENST00000432597 GOLGA3Q08378 1498 aa38.79■■■■□ 3.8
SYCE1-204ENST00000432597 FAM69CQ0P6D2 419 aa38.79■■■■□ 3.8
SYCE1-204ENST00000432597 CHIC1Q5VXU3 224 aa38.79■■■■□ 3.8
SYCE1-204ENST00000432597 DIP2BQ9P265 1576 aa38.75■■■■□ 3.79
SYCE1-204ENST00000432597 ASXL2Q76L83 1435 aa38.63■■■■□ 3.77
SYCE1-204ENST00000432597 KDM5BQ9UGL1 1544 aa38.61■■■■□ 3.77
SYCE1-204ENST00000432597 PLB1Q6P1J6 1458 aa38.6■■■■□ 3.77
SYCE1-204ENST00000432597 P3H3Q8IVL6 736 aa38.55■■■■□ 3.76
SYCE1-204ENST00000432597 KIF21BO75037 1637 aa38.55■■■■□ 3.76
SYCE1-204ENST00000432597 ZCCHC11Q5TAX3 1644 aaKnown RBP38.55■■■■□ 3.76
SYCE1-204ENST00000432597 ABCA8O94911 1581 aa38.52■■■■□ 3.76
SYCE1-204ENST00000432597 SAMD9Q5K651 1589 aa38.49■■■■□ 3.75
SYCE1-204ENST00000432597 TSPOAP1O95153 1857 aa38.47■■■■□ 3.75
SYCE1-204ENST00000432597 RANGAP1P46060 587 aaPredicted RBP38.45■■■■□ 3.75
SYCE1-204ENST00000432597 GLI2P10070 1586 aa38.43■■■■□ 3.74
SYCE1-204ENST00000432597 EPRSP07814 1512 aaKnown RBP38.39■■■■□ 3.74
SYCE1-204ENST00000432597 EHMT2Q96KQ7 1210 aa38.37■■■■□ 3.73
SYCE1-204ENST00000432597 WDR7Q9Y4E6 1490 aa38.35■■■■□ 3.73
SYCE1-204ENST00000432597 FHOD3Q2V2M9 1422 aa38.29■■■■□ 3.72
SYCE1-204ENST00000432597 ARID3CA6NKF2 412 aa38.28■■■■□ 3.72
SYCE1-204ENST00000432597 UBTFP17480 764 aaKnown RBP38.28■■■■□ 3.72
SYCE1-204ENST00000432597 KDM6BO15054 1643 aa38.27■■■■□ 3.72
SYCE1-204ENST00000432597 PPRC1Q5VV67 1664 aaKnown RBP38.27■■■■□ 3.72
SYCE1-204ENST00000432597 MAP3K4Q9Y6R4 1608 aa38.24■■■■□ 3.71
SYCE1-204ENST00000432597 RAPGEF6Q8TEU7 1601 aa38.23■■■■□ 3.71
SYCE1-204ENST00000432597 EFCAB5A4FU69 1503 aa38.22■■■■□ 3.71
SYCE1-204ENST00000432597 ATP10BO94823 1461 aa38.21■■■■□ 3.71
SYCE1-204ENST00000432597 KCNH8Q96L42 1107 aa38.19■■■■□ 3.7
SYCE1-204ENST00000432597 TEX14Q8IWB6 1497 aa38.1■■■■□ 3.69
SYCE1-204ENST00000432597 NUP153P49790 1475 aaKnown RBP38.09■■■■□ 3.69
SYCE1-204ENST00000432597 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP38.07■■■■□ 3.68
SYCE1-204ENST00000432597 HNRNPUL2Q1KMD3 747 aaKnown RBP38.07■■■■□ 3.68
SYCE1-204ENST00000432597 CD109Q6YHK3 1445 aa38.05■■■■□ 3.68
SYCE1-204ENST00000432597 CFAP43Q8NDM7 1665 aa38.05■■■■□ 3.68
SYCE1-204ENST00000432597 ARHGAP35Q9NRY4 1499 aa37.98■■■■□ 3.67
SYCE1-204ENST00000432597 MAGI3Q5TCQ9 1506 aa37.97■■■■□ 3.67
SYCE1-204ENST00000432597 COL17A1Q9UMD9 1497 aaPredicted RBP37.96■■■■□ 3.67
SYCE1-204ENST00000432597 AEBP2Q6ZN18 517 aaPredicted RBP37.94■■■■□ 3.66
SYCE1-204ENST00000432597 FMN1Q68DA7 1419 aa37.89■■■■□ 3.66
SYCE1-204ENST00000432597 ABCA9Q8IUA7 1624 aa37.88■■■■□ 3.65
SYCE1-204ENST00000432597 PLEKHD1A6NEE1 506 aa37.85■■■■□ 3.65
SYCE1-204ENST00000432597 ATP1B4Q9UN42 357 aaPredicted RBP37.8■■■■□ 3.64
SYCE1-204ENST00000432597 CDK13Q14004 1512 aaKnown RBP37.8■■■■□ 3.64
SYCE1-204ENST00000432597 HECW1Q76N89 1606 aa37.77■■■■□ 3.64
SYCE1-204ENST00000432597 ARAP3Q8WWN8 1544 aa37.66■■■■□ 3.62
SYCE1-204ENST00000432597 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP37.64■■■■□ 3.62
SYCE1-204ENST00000432597 PHLDB1Q86UU1 1377 aa37.64■■■■□ 3.62
SYCE1-204ENST00000432597 KDM4FA0A1W2PPD8 638 aa37.62■■■■□ 3.61
SYCE1-204ENST00000432597 NEO1Q92859 1461 aa37.62■■■■□ 3.61
SYCE1-204ENST00000432597 CLIP1P30622 1438 aa37.61■■■■□ 3.61
SYCE1-204ENST00000432597 TTC37Q6PGP7 1564 aa37.59■■■■□ 3.61
SYCE1-204ENST00000432597 CDK11AQ9UQ88 783 aaPredicted RBP37.57■■■■□ 3.6
SYCE1-204ENST00000432597 PCF11O94913 1555 aaKnown RBP37.55■■■■□ 3.6
SYCE1-204ENST00000432597 LRRIQ1Q96JM4 1722 aa37.55■■■■□ 3.6
SYCE1-204ENST00000432597 CASKIN1Q8WXD9 1431 aa37.54■■■■□ 3.6
SYCE1-204ENST00000432597 RAPGEF3O95398 923 aa37.49■■■■□ 3.59
SYCE1-204ENST00000432597 FANCAO15360 1455 aa37.49■■■■□ 3.59
SYCE1-204ENST00000432597 ADGRL1O94910 1474 aa37.47■■■■□ 3.59
SYCE1-204ENST00000432597 TROQ12816 1431 aaPredicted RBP37.46■■■■□ 3.59
SYCE1-204ENST00000432597 CFAP74Q9C0B2 1584 aa37.46■■■■□ 3.59
SYCE1-204ENST00000432597 CCDC18Q5T9S5 1454 aa37.45■■■■□ 3.59
SYCE1-204ENST00000432597 AKNAQ7Z591 1439 aa37.44■■■■□ 3.58
SYCE1-204ENST00000432597 KIF14Q15058 1648 aa37.43■■■■□ 3.58
SYCE1-204ENST00000432597 FYCO1Q9BQS8 1478 aa37.42■■■■□ 3.58
SYCE1-204ENST00000432597 PLCH2O75038 1416 aa37.4■■■■□ 3.58
SYCE1-204ENST00000432597 FRMPD1Q5SYB0 1578 aa37.4■■■■□ 3.58
SYCE1-204ENST00000432597 DENND4BO75064 1496 aaPredicted RBP37.37■■■■□ 3.57
SYCE1-204ENST00000432597 MYO5CQ9NQX4 1742 aa37.35■■■■□ 3.57
SYCE1-204ENST00000432597 CEP162Q5TB80 1403 aa37.33■■■■□ 3.57
SYCE1-204ENST00000432597 RICTORQ6R327 1708 aa37.3■■■■□ 3.56
SYCE1-204ENST00000432597 EFCAB2Q5VUJ9 269 aa37.27■■■■□ 3.56
SYCE1-204ENST00000432597 LOC105371045A0A1W2PR82 267 aa37.24■■■■□ 3.55
SYCE1-204ENST00000432597 SCAPERQ9BY12 1400 aa37.23■■■■□ 3.55
SYCE1-204ENST00000432597 ARHGAP5Q13017 1502 aa37.22■■■■□ 3.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms