RNA–Protein interactions for RNA: ENST00000431556.6

YIF1A-204, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 619 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-204ENST00000431556 CHIC1Q5VXU3 224 aa26.48■■□□□ 1.83
YIF1A-204ENST00000431556 RAPGEF2Q9Y4G8 1499 aa26.48■■□□□ 1.83
YIF1A-204ENST00000431556 KIAA0586Q9BVV6 1533 aa26.47■■□□□ 1.83
YIF1A-204ENST00000431556 JPH4Q96JJ6 628 aa26.44■■□□□ 1.82
YIF1A-204ENST00000431556 PRG4Q92954 1404 aaPredicted RBP26.43■■□□□ 1.82
YIF1A-204ENST00000431556 PRXQ9BXM0 1461 aa26.38■■□□□ 1.81
YIF1A-204ENST00000431556 IQGAP2Q13576 1575 aa26.36■■□□□ 1.81
YIF1A-204ENST00000431556 EEA1Q15075 1411 aa26.33■■□□□ 1.81
YIF1A-204ENST00000431556 CSRNP3Q8WYN3 585 aa26.31■■□□□ 1.8
YIF1A-204ENST00000431556 FAM9AQ8IZU1 332 aaPredicted RBP26.3■■□□□ 1.8
YIF1A-204ENST00000431556 CTTNBP2Q8WZ74 1663 aa26.28■■□□□ 1.8
YIF1A-204ENST00000431556 UGGT2Q9NYU1 1516 aa26.19■■□□□ 1.78
YIF1A-204ENST00000431556 DISP1Q96F81 1524 aa26.18■■□□□ 1.78
YIF1A-204ENST00000431556 CARMIL2Q6F5E8 1435 aa26.16■■□□□ 1.78
YIF1A-204ENST00000431556 KIF21BO75037 1637 aa26.12■■□□□ 1.77
YIF1A-204ENST00000431556 KIAA0556O60303 1618 aa26.11■■□□□ 1.77
YIF1A-204ENST00000431556 TNIKQ9UKE5 1360 aa26.1■■□□□ 1.77
YIF1A-204ENST00000431556 TTBK1Q5TCY1 1321 aaPredicted RBP26.1■■□□□ 1.77
YIF1A-204ENST00000431556 PTPRGP23470 1445 aa26.09■■□□□ 1.77
YIF1A-204ENST00000431556 ADCY10Q96PN6 1610 aa26.08■■□□□ 1.77
YIF1A-204ENST00000431556 TRHP20396 242 aaPredicted RBP26.01■■□□□ 1.75
YIF1A-204ENST00000431556 GOLGA3Q08378 1498 aa26■■□□□ 1.75
YIF1A-204ENST00000431556 EHMT2Q96KQ7 1210 aa26■■□□□ 1.75
YIF1A-204ENST00000431556 SAMD9Q5K651 1589 aa25.92■■□□□ 1.74
YIF1A-204ENST00000431556 UACAQ9BZF9 1416 aa25.91■■□□□ 1.74
YIF1A-204ENST00000431556 ABCC2Q92887 1545 aa25.9■■□□□ 1.74
YIF1A-204ENST00000431556 UHRF1BP1LA0JNW5 1464 aa25.9■■□□□ 1.74
YIF1A-204ENST00000431556 NPM1P06748 294 aaKnown RBP eCLIP25.89■■□□□ 1.74
YIF1A-204ENST00000431556 RANGAP1P46060 587 aaPredicted RBP25.89■■□□□ 1.74
YIF1A-204ENST00000431556 P3H3Q8IVL6 736 aa25.89■■□□□ 1.74
YIF1A-204ENST00000431556 MAPKBP1O60336 1514 aa25.87■■□□□ 1.73
YIF1A-204ENST00000431556 UBTFP17480 764 aaKnown RBP25.86■■□□□ 1.73
YIF1A-204ENST00000431556 PLB1Q6P1J6 1458 aa25.85■■□□□ 1.73
YIF1A-204ENST00000431556 ABCA8O94911 1581 aa25.82■■□□□ 1.72
YIF1A-204ENST00000431556 KIF13AQ9H1H9 1805 aa25.81■■□□□ 1.72
YIF1A-204ENST00000431556 FHOD3Q2V2M9 1422 aa25.8■■□□□ 1.72
YIF1A-204ENST00000431556 KDM5BQ9UGL1 1544 aa25.78■■□□□ 1.72
YIF1A-204ENST00000431556 ZCCHC11Q5TAX3 1644 aaKnown RBP25.77■■□□□ 1.72
YIF1A-204ENST00000431556 EFCAB5A4FU69 1503 aa25.77■■□□□ 1.72
YIF1A-204ENST00000431556 DIP2BQ9P265 1576 aa25.75■■□□□ 1.71
YIF1A-204ENST00000431556 ABCC10Q5T3U5 1492 aa25.75■■□□□ 1.71
YIF1A-204ENST00000431556 ASXL2Q76L83 1435 aa25.73■■□□□ 1.71
YIF1A-204ENST00000431556 RAPGEF6Q8TEU7 1601 aa25.69■■□□□ 1.7
YIF1A-204ENST00000431556 FAM69CQ0P6D2 419 aa25.68■■□□□ 1.7
YIF1A-204ENST00000431556 ARHGAP35Q9NRY4 1499 aa25.67■■□□□ 1.7
YIF1A-204ENST00000431556 ARID3CA6NKF2 412 aa25.64■■□□□ 1.7
YIF1A-204ENST00000431556 ATP10BO94823 1461 aa25.6■■□□□ 1.69
YIF1A-204ENST00000431556 NUP153P49790 1475 aaKnown RBP25.59■■□□□ 1.69
YIF1A-204ENST00000431556 WDR7Q9Y4E6 1490 aa25.59■■□□□ 1.69
YIF1A-204ENST00000431556 EPRSP07814 1512 aaKnown RBP25.58■■□□□ 1.68
YIF1A-204ENST00000431556 GLI2P10070 1586 aa25.56■■□□□ 1.68
YIF1A-204ENST00000431556 TSPOAP1O95153 1857 aa25.55■■□□□ 1.68
YIF1A-204ENST00000431556 FMN1Q68DA7 1419 aa25.51■■□□□ 1.67
YIF1A-204ENST00000431556 CLIP1P30622 1438 aa25.49■■□□□ 1.67
YIF1A-204ENST00000431556 PPRC1Q5VV67 1664 aaKnown RBP25.48■■□□□ 1.67
YIF1A-204ENST00000431556 MAP3K4Q9Y6R4 1608 aa25.48■■□□□ 1.67
YIF1A-204ENST00000431556 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.45■■□□□ 1.66
YIF1A-204ENST00000431556 HNRNPUL2Q1KMD3 747 aaKnown RBP25.45■■□□□ 1.66
YIF1A-204ENST00000431556 KCNH8Q96L42 1107 aa25.45■■□□□ 1.66
YIF1A-204ENST00000431556 CDK13Q14004 1512 aaKnown RBP25.45■■□□□ 1.66
YIF1A-204ENST00000431556 HECW1Q76N89 1606 aa25.45■■□□□ 1.66
YIF1A-204ENST00000431556 LOC105371045A0A1W2PR82 267 aa25.42■■□□□ 1.66
YIF1A-204ENST00000431556 ATP1B4Q9UN42 357 aaPredicted RBP25.4■■□□□ 1.66
YIF1A-204ENST00000431556 PCF11O94913 1555 aaKnown RBP25.39■■□□□ 1.66
YIF1A-204ENST00000431556 CFAP43Q8NDM7 1665 aa25.39■■□□□ 1.65
YIF1A-204ENST00000431556 CEP162Q5TB80 1403 aa25.37■■□□□ 1.65
YIF1A-204ENST00000431556 LRRIQ1Q96JM4 1722 aa25.37■■□□□ 1.65
YIF1A-204ENST00000431556 CD109Q6YHK3 1445 aa25.34■■□□□ 1.65
YIF1A-204ENST00000431556 KDM6BO15054 1643 aa25.34■■□□□ 1.65
YIF1A-204ENST00000431556 CASKIN1Q8WXD9 1431 aa25.33■■□□□ 1.65
YIF1A-204ENST00000431556 ABCA9Q8IUA7 1624 aa25.33■■□□□ 1.65
YIF1A-204ENST00000431556 PLEKHD1A6NEE1 506 aa25.31■■□□□ 1.64
YIF1A-204ENST00000431556 TEX14Q8IWB6 1497 aa25.3■■□□□ 1.64
YIF1A-204ENST00000431556 MAGI3Q5TCQ9 1506 aa25.29■■□□□ 1.64
YIF1A-204ENST00000431556 FYCO1Q9BQS8 1478 aa25.28■■□□□ 1.64
YIF1A-204ENST00000431556 TTC37Q6PGP7 1564 aa25.22■■□□□ 1.63
YIF1A-204ENST00000431556 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.22■■□□□ 1.636e-8■■■■□ 20.3
YIF1A-204ENST00000431556 CCDC18Q5T9S5 1454 aa25.22■■□□□ 1.63
YIF1A-204ENST00000431556 COL17A1Q9UMD9 1497 aaPredicted RBP25.21■■□□□ 1.63
YIF1A-204ENST00000431556 KIF14Q15058 1648 aa25.18■■□□□ 1.62
YIF1A-204ENST00000431556 TROQ12816 1431 aaPredicted RBP25.18■■□□□ 1.62
YIF1A-204ENST00000431556 CDK11AQ9UQ88 783 aaPredicted RBP25.17■■□□□ 1.62
YIF1A-204ENST00000431556 NEO1Q92859 1461 aa25.09■■□□□ 1.61
YIF1A-204ENST00000431556 ARAP3Q8WWN8 1544 aa25.07■■□□□ 1.6
YIF1A-204ENST00000431556 MYO5CQ9NQX4 1742 aa25.06■■□□□ 1.6
YIF1A-204ENST00000431556 VPS8Q8N3P4 1428 aa25.06■■□□□ 1.6
YIF1A-204ENST00000431556 FANCAO15360 1455 aa25.05■■□□□ 1.6
YIF1A-204ENST00000431556 CFAP74Q9C0B2 1584 aa25.05■■□□□ 1.6
YIF1A-204ENST00000431556 PLCH2O75038 1416 aa25.03■■□□□ 1.6
YIF1A-204ENST00000431556 PHLDB1Q86UU1 1377 aa25.02■■□□□ 1.6
YIF1A-204ENST00000431556 AKNAQ7Z591 1439 aa25■■□□□ 1.59
YIF1A-204ENST00000431556 FRMPD1Q5SYB0 1578 aa24.99■■□□□ 1.59
YIF1A-204ENST00000431556 MTUS2Q5JR59 1369 aa24.97■■□□□ 1.59
YIF1A-204ENST00000431556 RAPGEF3O95398 923 aa24.96■■□□□ 1.59
YIF1A-204ENST00000431556 ARHGAP5Q13017 1502 aa24.96■■□□□ 1.59
YIF1A-204ENST00000431556 CDC42BPBQ9Y5S2 1711 aa24.95■■□□□ 1.59
YIF1A-204ENST00000431556 PREX2Q70Z35 1606 aa24.95■■□□□ 1.58
YIF1A-204ENST00000431556 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.58
YIF1A-204ENST00000431556 TIAM1Q13009 1591 aa24.94■■□□□ 1.58
YIF1A-204ENST00000431556 CDC42BPAQ5VT25 1732 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms