RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.55
SPTLC3-202ENST00000431275 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.55
SPTLC3-202ENST00000431275 JPH4Q96JJ6 628 aa18.46■□□□□ 0.55
SPTLC3-202ENST00000431275 KIAA0586Q9BVV6 1533 aa18.44■□□□□ 0.54
SPTLC3-202ENST00000431275 SHROOM2Q13796 1616 aa18.39■□□□□ 0.53
SPTLC3-202ENST00000431275 CYB5RLQ6IPT4 315 aa18.38■□□□□ 0.53
SPTLC3-202ENST00000431275 PRG4Q92954 1404 aaPredicted RBP18.37■□□□□ 0.53
SPTLC3-202ENST00000431275 ARAP1Q96P48 1450 aa18.35■□□□□ 0.53
SPTLC3-202ENST00000431275 ERCC6L2Q5T890 1561 aa18.34■□□□□ 0.53
SPTLC3-202ENST00000431275 IQGAP2Q13576 1575 aa18.33■□□□□ 0.52
SPTLC3-202ENST00000431275 KIF21BO75037 1637 aa18.29■□□□□ 0.52
SPTLC3-202ENST00000431275 EHMT2Q96KQ7 1210 aa18.28■□□□□ 0.52
SPTLC3-202ENST00000431275 CTTNBP2Q8WZ74 1663 aa18.26■□□□□ 0.51
SPTLC3-202ENST00000431275 CARMIL2Q6F5E8 1435 aa18.24■□□□□ 0.51
SPTLC3-202ENST00000431275 UGGT2Q9NYU1 1516 aa18.24■□□□□ 0.51
SPTLC3-202ENST00000431275 UBTFP17480 764 aaKnown RBP18.23■□□□□ 0.51
SPTLC3-202ENST00000431275 GOLGA3Q08378 1498 aa18.21■□□□□ 0.51
SPTLC3-202ENST00000431275 DISP1Q96F81 1524 aa18.21■□□□□ 0.51
SPTLC3-202ENST00000431275 TNIKQ9UKE5 1360 aa18.19■□□□□ 0.5
SPTLC3-202ENST00000431275 TTBK1Q5TCY1 1321 aaPredicted RBP18.18■□□□□ 0.5
SPTLC3-202ENST00000431275 PTPRGP23470 1445 aa18.17■□□□□ 0.5
SPTLC3-202ENST00000431275 RANGAP1P46060 587 aaPredicted RBP18.16■□□□□ 0.5
SPTLC3-202ENST00000431275 KIAA0556O60303 1618 aa18.15■□□□□ 0.5
SPTLC3-202ENST00000431275 P3H3Q8IVL6 736 aa18.13■□□□□ 0.49
SPTLC3-202ENST00000431275 SAMD9Q5K651 1589 aa18.06■□□□□ 0.48
SPTLC3-202ENST00000431275 UACAQ9BZF9 1416 aa18.05■□□□□ 0.48
SPTLC3-202ENST00000431275 NPM1P06748 294 aaKnown RBP eCLIP18.04■□□□□ 0.48
SPTLC3-202ENST00000431275 ADCY10Q96PN6 1610 aa18.03■□□□□ 0.48
SPTLC3-202ENST00000431275 LOC105371045A0A1W2PR82 267 aa18.02■□□□□ 0.48
SPTLC3-202ENST00000431275 EFCAB5A4FU69 1503 aa18.01■□□□□ 0.47
SPTLC3-202ENST00000431275 UHRF1BP1LA0JNW5 1464 aa18.01■□□□□ 0.47
SPTLC3-202ENST00000431275 FHOD3Q2V2M9 1422 aa18■□□□□ 0.47
SPTLC3-202ENST00000431275 PLB1Q6P1J6 1458 aa17.99■□□□□ 0.47
SPTLC3-202ENST00000431275 ABCC2Q92887 1545 aa17.98■□□□□ 0.47
SPTLC3-202ENST00000431275 ARHGAP35Q9NRY4 1499 aa17.97■□□□□ 0.47
SPTLC3-202ENST00000431275 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
SPTLC3-202ENST00000431275 ABCA8O94911 1581 aa17.96■□□□□ 0.46
SPTLC3-202ENST00000431275 KDM5BQ9UGL1 1544 aa17.92■□□□□ 0.46
SPTLC3-202ENST00000431275 CLIP1P30622 1438 aa17.91■□□□□ 0.46
SPTLC3-202ENST00000431275 MAPKBP1O60336 1514 aa17.89■□□□□ 0.45
SPTLC3-202ENST00000431275 RAPGEF6Q8TEU7 1601 aa17.87■□□□□ 0.45
SPTLC3-202ENST00000431275 ARID3CA6NKF2 412 aa17.87■□□□□ 0.45
SPTLC3-202ENST00000431275 FMN1Q68DA7 1419 aa17.87■□□□□ 0.45
SPTLC3-202ENST00000431275 ZCCHC11Q5TAX3 1644 aaKnown RBP17.86■□□□□ 0.45
SPTLC3-202ENST00000431275 CEP162Q5TB80 1403 aa17.85■□□□□ 0.45
SPTLC3-202ENST00000431275 ASXL2Q76L83 1435 aa17.85■□□□□ 0.45
SPTLC3-202ENST00000431275 ATP10BO94823 1461 aa17.84■□□□□ 0.45
SPTLC3-202ENST00000431275 FAM69CQ0P6D2 419 aa17.83■□□□□ 0.44
SPTLC3-202ENST00000431275 NUP153P49790 1475 aaKnown RBP17.82■□□□□ 0.44
SPTLC3-202ENST00000431275 ABCC10Q5T3U5 1492 aa17.82■□□□□ 0.44
SPTLC3-202ENST00000431275 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.82■□□□□ 0.44
SPTLC3-202ENST00000431275 HNRNPUL2Q1KMD3 747 aaKnown RBP17.82■□□□□ 0.44
SPTLC3-202ENST00000431275 ATP1B4Q9UN42 357 aaPredicted RBP17.82■□□□□ 0.44
SPTLC3-202ENST00000431275 WDR7Q9Y4E6 1490 aa17.76■□□□□ 0.43
SPTLC3-202ENST00000431275 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
SPTLC3-202ENST00000431275 KCNH8Q96L42 1107 aa17.76■□□□□ 0.43
SPTLC3-202ENST00000431275 CASKIN1Q8WXD9 1431 aa17.75■□□□□ 0.43
SPTLC3-202ENST00000431275 KIF13AQ9H1H9 1805 aa17.75■□□□□ 0.43
SPTLC3-202ENST00000431275 EPRSP07814 1512 aaKnown RBP17.74■□□□□ 0.43
SPTLC3-202ENST00000431275 PLEKHD1A6NEE1 506 aa17.74■□□□□ 0.43
SPTLC3-202ENST00000431275 HECW1Q76N89 1606 aa17.73■□□□□ 0.43
SPTLC3-202ENST00000431275 CDK13Q14004 1512 aaKnown RBP17.72■□□□□ 0.43
SPTLC3-202ENST00000431275 PCF11O94913 1555 aaKnown RBP17.7■□□□□ 0.42
SPTLC3-202ENST00000431275 GLI2P10070 1586 aa17.7■□□□□ 0.42
SPTLC3-202ENST00000431275 FYCO1Q9BQS8 1478 aa17.69■□□□□ 0.42
SPTLC3-202ENST00000431275 CDK11AQ9UQ88 783 aaPredicted RBP17.68■□□□□ 0.42
SPTLC3-202ENST00000431275 CCDC18Q5T9S5 1454 aa17.64■□□□□ 0.41
SPTLC3-202ENST00000431275 LRRIQ1Q96JM4 1722 aa17.64■□□□□ 0.41
SPTLC3-202ENST00000431275 VPS8Q8N3P4 1428 aa17.63■□□□□ 0.41
SPTLC3-202ENST00000431275 CD109Q6YHK3 1445 aa17.62■□□□□ 0.41
SPTLC3-202ENST00000431275 MAP3K4Q9Y6R4 1608 aa17.61■□□□□ 0.41
SPTLC3-202ENST00000431275 TSPOAP1O95153 1857 aa17.6■□□□□ 0.41
SPTLC3-202ENST00000431275 TROQ12816 1431 aaPredicted RBP17.59■□□□□ 0.41
SPTLC3-202ENST00000431275 CFAP43Q8NDM7 1665 aa17.58■□□□□ 0.4
SPTLC3-202ENST00000431275 ABCA9Q8IUA7 1624 aa17.57■□□□□ 0.4
SPTLC3-202ENST00000431275 PPRC1Q5VV67 1664 aaKnown RBP17.56■□□□□ 0.4
SPTLC3-202ENST00000431275 MAGI3Q5TCQ9 1506 aa17.56■□□□□ 0.4
SPTLC3-202ENST00000431275 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.55■□□□□ 0.4
SPTLC3-202ENST00000431275 TEX14Q8IWB6 1497 aa17.54■□□□□ 0.4
SPTLC3-202ENST00000431275 MTUS2Q5JR59 1369 aa17.51■□□□□ 0.39
SPTLC3-202ENST00000431275 KIF14Q15058 1648 aa17.5■□□□□ 0.39
SPTLC3-202ENST00000431275 TTC37Q6PGP7 1564 aa17.49■□□□□ 0.39
SPTLC3-202ENST00000431275 PLCH2O75038 1416 aa17.47■□□□□ 0.39
SPTLC3-202ENST00000431275 APLP2Q06481 763 aa17.47■□□□□ 0.39
SPTLC3-202ENST00000431275 TIAM1Q13009 1591 aa17.47■□□□□ 0.39
SPTLC3-202ENST00000431275 COL17A1Q9UMD9 1497 aaPredicted RBP17.45■□□□□ 0.38
SPTLC3-202ENST00000431275 PHLDB1Q86UU1 1377 aa17.45■□□□□ 0.38
SPTLC3-202ENST00000431275 KDM6BO15054 1643 aa17.45■□□□□ 0.38
SPTLC3-202ENST00000431275 MAP3K1Q13233 1512 aa17.45■□□□□ 0.38
SPTLC3-202ENST00000431275 NEO1Q92859 1461 aa17.44■□□□□ 0.38
SPTLC3-202ENST00000431275 KANK4Q5T7N3 995 aaPredicted RBP17.44■□□□□ 0.38
SPTLC3-202ENST00000431275 EHBP1L1Q8N3D4 1523 aa17.43■□□□□ 0.38
SPTLC3-202ENST00000431275 EFCAB2Q5VUJ9 269 aa17.43■□□□□ 0.38
SPTLC3-202ENST00000431275 FANCAO15360 1455 aa17.43■□□□□ 0.38
SPTLC3-202ENST00000431275 LRRC9Q6ZRR7 1453 aa17.42■□□□□ 0.38
SPTLC3-202ENST00000431275 AKNAQ7Z591 1439 aa17.41■□□□□ 0.38
SPTLC3-202ENST00000431275 MYO5CQ9NQX4 1742 aa17.4■□□□□ 0.38
SPTLC3-202ENST00000431275 ARAP3Q8WWN8 1544 aa17.4■□□□□ 0.38
SPTLC3-202ENST00000431275 CCNB3Q8WWL7 1395 aa17.39■□□□□ 0.37
SPTLC3-202ENST00000431275 GPATCH8Q9UKJ3 1502 aaKnown RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms