RNA–Protein interactions for RNA: ENST00000430687.1

CDC42EP1-203, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 720 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-203ENST00000430687 JPH4Q96JJ6 628 aa29.71■■■□□ 2.35
CDC42EP1-203ENST00000430687 GOLGA3Q08378 1498 aa29.7■■■□□ 2.35
CDC42EP1-203ENST00000430687 SHROOM2Q13796 1616 aa29.67■■■□□ 2.34
CDC42EP1-203ENST00000430687 IQGAP2Q13576 1575 aa29.65■■■□□ 2.34
CDC42EP1-203ENST00000430687 CTTNBP2Q8WZ74 1663 aa29.61■■■□□ 2.33
CDC42EP1-203ENST00000430687 ARHGEF11O15085 1522 aa29.61■■■□□ 2.33
CDC42EP1-203ENST00000430687 UBTFP17480 764 aaKnown RBP29.58■■■□□ 2.33
CDC42EP1-203ENST00000430687 PRG4Q92954 1404 aaPredicted RBP29.58■■■□□ 2.33
CDC42EP1-203ENST00000430687 UGGT2Q9NYU1 1516 aa29.55■■■□□ 2.32
CDC42EP1-203ENST00000430687 RIMBP3CA6NJZ7 1639 aa29.53■■■□□ 2.32
CDC42EP1-203ENST00000430687 RIMBP3BA6NNM3 1639 aa29.53■■■□□ 2.32
CDC42EP1-203ENST00000430687 RIMBP3Q9UFD9 1639 aa29.53■■■□□ 2.32
CDC42EP1-203ENST00000430687 EHMT2Q96KQ7 1210 aa29.53■■■□□ 2.32
CDC42EP1-203ENST00000430687 CARMIL2Q6F5E8 1435 aa29.5■■■□□ 2.31
CDC42EP1-203ENST00000430687 ERCC6L2Q5T890 1561 aa29.46■■■□□ 2.31
CDC42EP1-203ENST00000430687 TNIKQ9UKE5 1360 aa29.43■■■□□ 2.3
CDC42EP1-203ENST00000430687 DISP1Q96F81 1524 aa29.43■■■□□ 2.3
CDC42EP1-203ENST00000430687 ARAP1Q96P48 1450 aa29.39■■■□□ 2.3
CDC42EP1-203ENST00000430687 KIAA0556O60303 1618 aa29.36■■■□□ 2.29
CDC42EP1-203ENST00000430687 LOC105371045A0A1W2PR82 267 aa29.33■■■□□ 2.29
CDC42EP1-203ENST00000430687 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
CDC42EP1-203ENST00000430687 SAMD9Q5K651 1589 aa29.31■■■□□ 2.28
CDC42EP1-203ENST00000430687 EFCAB5A4FU69 1503 aa29.3■■■□□ 2.28
CDC42EP1-203ENST00000430687 PTPRGP23470 1445 aa29.3■■■□□ 2.28
CDC42EP1-203ENST00000430687 RANGAP1P46060 587 aaPredicted RBP29.29■■■□□ 2.28
CDC42EP1-203ENST00000430687 P3H3Q8IVL6 736 aa29.22■■■□□ 2.27
CDC42EP1-203ENST00000430687 ARHGAP35Q9NRY4 1499 aa29.19■■■□□ 2.26
CDC42EP1-203ENST00000430687 CLIP1P30622 1438 aa29.17■■■□□ 2.26
CDC42EP1-203ENST00000430687 TTBK1Q5TCY1 1321 aaPredicted RBP29.17■■■□□ 2.26
CDC42EP1-203ENST00000430687 FHOD3Q2V2M9 1422 aa29.14■■■□□ 2.26
CDC42EP1-203ENST00000430687 CEP162Q5TB80 1403 aa29.12■■■□□ 2.25
CDC42EP1-203ENST00000430687 UACAQ9BZF9 1416 aa29.11■■■□□ 2.25
CDC42EP1-203ENST00000430687 UHRF1BP1LA0JNW5 1464 aa29.09■■■□□ 2.25
CDC42EP1-203ENST00000430687 FMN1Q68DA7 1419 aa29.05■■■□□ 2.24
CDC42EP1-203ENST00000430687 ABCA8O94911 1581 aa29.04■■■□□ 2.24
CDC42EP1-203ENST00000430687 PLB1Q6P1J6 1458 aa29.04■■■□□ 2.24
CDC42EP1-203ENST00000430687 ABCC2Q92887 1545 aa29.03■■■□□ 2.24
CDC42EP1-203ENST00000430687 ADCY10Q96PN6 1610 aa29.02■■■□□ 2.24
CDC42EP1-203ENST00000430687 NPM1P06748 294 aaKnown RBP eCLIP29■■■□□ 2.23
CDC42EP1-203ENST00000430687 RAPGEF6Q8TEU7 1601 aa28.94■■■□□ 2.22
CDC42EP1-203ENST00000430687 KDM5BQ9UGL1 1544 aa28.93■■■□□ 2.22
CDC42EP1-203ENST00000430687 NUP153P49790 1475 aaKnown RBP28.86■■■□□ 2.21
CDC42EP1-203ENST00000430687 CASKIN1Q8WXD9 1431 aa28.86■■■□□ 2.21
CDC42EP1-203ENST00000430687 ATP10BO94823 1461 aa28.82■■■□□ 2.2
CDC42EP1-203ENST00000430687 MAPKBP1O60336 1514 aa28.82■■■□□ 2.2
CDC42EP1-203ENST00000430687 HECW1Q76N89 1606 aa28.8■■■□□ 2.2
CDC42EP1-203ENST00000430687 ZCCHC11Q5TAX3 1644 aaKnown RBP28.8■■■□□ 2.2
CDC42EP1-203ENST00000430687 FYCO1Q9BQS8 1478 aa28.79■■■□□ 2.2
CDC42EP1-203ENST00000430687 ATP1B4Q9UN42 357 aaPredicted RBP28.78■■■□□ 2.2
CDC42EP1-203ENST00000430687 VPS8Q8N3P4 1428 aa28.77■■■□□ 2.2
CDC42EP1-203ENST00000430687 PCF11O94913 1555 aaKnown RBP28.76■■■□□ 2.19
CDC42EP1-203ENST00000430687 ASXL2Q76L83 1435 aa28.74■■■□□ 2.19
CDC42EP1-203ENST00000430687 EPRSP07814 1512 aaKnown RBP28.74■■■□□ 2.19
CDC42EP1-203ENST00000430687 ARID3CA6NKF2 412 aa28.73■■■□□ 2.19
CDC42EP1-203ENST00000430687 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.72■■■□□ 2.19
CDC42EP1-203ENST00000430687 HNRNPUL2Q1KMD3 747 aaKnown RBP28.72■■■□□ 2.19
CDC42EP1-203ENST00000430687 CCDC18Q5T9S5 1454 aa28.71■■■□□ 2.19
CDC42EP1-203ENST00000430687 WDR7Q9Y4E6 1490 aa28.66■■■□□ 2.18
CDC42EP1-203ENST00000430687 PLEKHD1A6NEE1 506 aa28.66■■■□□ 2.18
CDC42EP1-203ENST00000430687 CDK11AQ9UQ88 783 aaPredicted RBP28.66■■■□□ 2.18
CDC42EP1-203ENST00000430687 CDK13Q14004 1512 aaKnown RBP28.65■■■□□ 2.18
CDC42EP1-203ENST00000430687 ABCC10Q5T3U5 1492 aa28.64■■■□□ 2.17
CDC42EP1-203ENST00000430687 TRHP20396 242 aaPredicted RBP28.6■■■□□ 2.17
CDC42EP1-203ENST00000430687 LRRIQ1Q96JM4 1722 aa28.58■■■□□ 2.17
CDC42EP1-203ENST00000430687 FAM69CQ0P6D2 419 aa28.56■■■□□ 2.16
CDC42EP1-203ENST00000430687 DIP2BQ9P265 1576 aa28.55■■■□□ 2.16
CDC42EP1-203ENST00000430687 GLI2P10070 1586 aa28.54■■■□□ 2.16
CDC42EP1-203ENST00000430687 KCNH8Q96L42 1107 aa28.53■■■□□ 2.16
CDC42EP1-203ENST00000430687 MAP3K1Q13233 1512 aa28.52■■■□□ 2.16
CDC42EP1-203ENST00000430687 TROQ12816 1431 aaPredicted RBP28.51■■■□□ 2.15
CDC42EP1-203ENST00000430687 APLP2Q06481 763 aa28.47■■■□□ 2.15
CDC42EP1-203ENST00000430687 TIAM1Q13009 1591 aa28.45■■■□□ 2.15
CDC42EP1-203ENST00000430687 KIF13AQ9H1H9 1805 aa28.45■■■□□ 2.14
CDC42EP1-203ENST00000430687 CFAP43Q8NDM7 1665 aa28.43■■■□□ 2.14
CDC42EP1-203ENST00000430687 MTUS2Q5JR59 1369 aa28.43■■■□□ 2.14
CDC42EP1-203ENST00000430687 MAGI3Q5TCQ9 1506 aa28.43■■■□□ 2.14
CDC42EP1-203ENST00000430687 ABCA9Q8IUA7 1624 aa28.39■■■□□ 2.13
CDC42EP1-203ENST00000430687 CD109Q6YHK3 1445 aa28.37■■■□□ 2.13
CDC42EP1-203ENST00000430687 KIF14Q15058 1648 aa28.37■■■□□ 2.13
CDC42EP1-203ENST00000430687 MAP3K4Q9Y6R4 1608 aa28.37■■■□□ 2.13
CDC42EP1-203ENST00000430687 EHBP1L1Q8N3D4 1523 aa28.37■■■□□ 2.13
CDC42EP1-203ENST00000430687 LRRC9Q6ZRR7 1453 aa28.35■■■□□ 2.13
CDC42EP1-203ENST00000430687 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.35■■■□□ 2.136e-7■■■■□ 19.5
CDC42EP1-203ENST00000430687 KANK4Q5T7N3 995 aaPredicted RBP28.31■■■□□ 2.12
CDC42EP1-203ENST00000430687 TTC37Q6PGP7 1564 aa28.28■■■□□ 2.12
CDC42EP1-203ENST00000430687 TEX14Q8IWB6 1497 aa28.27■■■□□ 2.12
CDC42EP1-203ENST00000430687 PLCH2O75038 1416 aa28.25■■■□□ 2.11
CDC42EP1-203ENST00000430687 ARAP3Q8WWN8 1544 aa28.22■■■□□ 2.11
CDC42EP1-203ENST00000430687 SUPT6HQ7KZ85 1726 aaKnown RBP28.21■■■□□ 2.11
CDC42EP1-203ENST00000430687 PPRC1Q5VV67 1664 aaKnown RBP28.21■■■□□ 2.11
CDC42EP1-203ENST00000430687 NCOA2Q15596 1464 aa28.21■■■□□ 2.11
CDC42EP1-203ENST00000430687 PHLDB1Q86UU1 1377 aa28.2■■■□□ 2.1
CDC42EP1-203ENST00000430687 CCNB3Q8WWL7 1395 aa28.2■■■□□ 2.1
CDC42EP1-203ENST00000430687 TSPOAP1O95153 1857 aa28.19■■■□□ 2.1
CDC42EP1-203ENST00000430687 GPATCH8Q9UKJ3 1502 aaKnown RBP28.17■■■□□ 2.1
CDC42EP1-203ENST00000430687 NEO1Q92859 1461 aa28.16■■■□□ 2.1
CDC42EP1-203ENST00000430687 MYO5CQ9NQX4 1742 aa28.16■■■□□ 2.1
CDC42EP1-203ENST00000430687 EFCAB2Q5VUJ9 269 aa28.16■■■□□ 2.1
CDC42EP1-203ENST00000430687 FANCAO15360 1455 aa28.14■■■□□ 2.09
CDC42EP1-203ENST00000430687 PREX2Q70Z35 1606 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms