RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 JPH4Q96JJ6 628 aa21.6■■□□□ 1.05
SMPD4-204ENST00000430682 CARMIL1Q5VZK9 1371 aa21.58■■□□□ 1.04
SMPD4-204ENST00000430682 TRHP20396 242 aaPredicted RBP21.55■■□□□ 1.04
SMPD4-204ENST00000430682 KIAA0586Q9BVV6 1533 aa21.55■■□□□ 1.04
SMPD4-204ENST00000430682 RAPGEF2Q9Y4G8 1499 aa21.41■■□□□ 1.02
SMPD4-204ENST00000430682 IQGAP2Q13576 1575 aa21.4■■□□□ 1.02
SMPD4-204ENST00000430682 ADCY10Q96PN6 1610 aa21.39■■□□□ 1.01
SMPD4-204ENST00000430682 KIF13AQ9H1H9 1805 aa21.36■■□□□ 1.01
SMPD4-204ENST00000430682 DISP1Q96F81 1524 aa21.33■■□□□ 1
SMPD4-204ENST00000430682 CTTNBP2Q8WZ74 1663 aa21.32■■□□□ 1
SMPD4-204ENST00000430682 PRXQ9BXM0 1461 aa21.31■■□□□ 1
SMPD4-204ENST00000430682 UGGT2Q9NYU1 1516 aa21.29■■□□□ 1
SMPD4-204ENST00000430682 TTBK1Q5TCY1 1321 aaPredicted RBP21.29■■□□□ 1
SMPD4-204ENST00000430682 PTPRGP23470 1445 aa21.28■■□□□ 1
SMPD4-204ENST00000430682 CARMIL2Q6F5E8 1435 aa21.26■□□□□ 0.99
SMPD4-204ENST00000430682 TNIKQ9UKE5 1360 aa21.25■□□□□ 0.99
SMPD4-204ENST00000430682 KIAA0556O60303 1618 aa21.23■□□□□ 0.99
SMPD4-204ENST00000430682 MAPKBP1O60336 1514 aa21.23■□□□□ 0.99
SMPD4-204ENST00000430682 DIP2BQ9P265 1576 aa21.19■□□□□ 0.98
SMPD4-204ENST00000430682 CSRNP3Q8WYN3 585 aa21.18■□□□□ 0.98
SMPD4-204ENST00000430682 ABCC10Q5T3U5 1492 aa21.18■□□□□ 0.98
SMPD4-204ENST00000430682 NPM1P06748 294 aaKnown RBP eCLIP21.17■□□□□ 0.98
SMPD4-204ENST00000430682 ABCC2Q92887 1545 aa21.14■□□□□ 0.98
SMPD4-204ENST00000430682 UHRF1BP1LA0JNW5 1464 aa21.13■□□□□ 0.97
SMPD4-204ENST00000430682 UACAQ9BZF9 1416 aa21.13■□□□□ 0.97
SMPD4-204ENST00000430682 FAM69CQ0P6D2 419 aa21.12■□□□□ 0.97
SMPD4-204ENST00000430682 CHIC1Q5VXU3 224 aa21.11■□□□□ 0.97
SMPD4-204ENST00000430682 TSPOAP1O95153 1857 aa21.11■□□□□ 0.97
SMPD4-204ENST00000430682 FAM9AQ8IZU1 332 aaPredicted RBP21.1■□□□□ 0.97
SMPD4-204ENST00000430682 ZCCHC11Q5TAX3 1644 aaKnown RBP21.07■□□□□ 0.96
SMPD4-204ENST00000430682 EEA1Q15075 1411 aa21.07■□□□□ 0.96
SMPD4-204ENST00000430682 KDM5BQ9UGL1 1544 aa21.06■□□□□ 0.96
SMPD4-204ENST00000430682 PLB1Q6P1J6 1458 aa21.06■□□□□ 0.96
SMPD4-204ENST00000430682 ASXL2Q76L83 1435 aa21.05■□□□□ 0.96
SMPD4-204ENST00000430682 GOLGA3Q08378 1498 aa21.05■□□□□ 0.96
SMPD4-204ENST00000430682 ABCA8O94911 1581 aa21.03■□□□□ 0.96
SMPD4-204ENST00000430682 SAMD9Q5K651 1589 aa21.02■□□□□ 0.95
SMPD4-204ENST00000430682 PPRC1Q5VV67 1664 aaKnown RBP21■□□□□ 0.95
SMPD4-204ENST00000430682 P3H3Q8IVL6 736 aa21■□□□□ 0.95
SMPD4-204ENST00000430682 KIF21BO75037 1637 aa20.99■□□□□ 0.95
SMPD4-204ENST00000430682 GLI2P10070 1586 aa20.97■□□□□ 0.95
SMPD4-204ENST00000430682 EPRSP07814 1512 aaKnown RBP20.94■□□□□ 0.94
SMPD4-204ENST00000430682 MAP3K4Q9Y6R4 1608 aa20.91■□□□□ 0.94
SMPD4-204ENST00000430682 RANGAP1P46060 587 aaPredicted RBP20.9■□□□□ 0.94
SMPD4-204ENST00000430682 EHMT2Q96KQ7 1210 aa20.89■□□□□ 0.93
SMPD4-204ENST00000430682 KDM6BO15054 1643 aa20.89■□□□□ 0.93
SMPD4-204ENST00000430682 WDR7Q9Y4E6 1490 aa20.88■□□□□ 0.93
SMPD4-204ENST00000430682 ARID3CA6NKF2 412 aa20.86■□□□□ 0.93
SMPD4-204ENST00000430682 FHOD3Q2V2M9 1422 aa20.86■□□□□ 0.93
SMPD4-204ENST00000430682 ATP10BO94823 1461 aa20.85■□□□□ 0.93
SMPD4-204ENST00000430682 RAPGEF6Q8TEU7 1601 aa20.85■□□□□ 0.93
SMPD4-204ENST00000430682 COL17A1Q9UMD9 1497 aaPredicted RBP20.8■□□□□ 0.92
SMPD4-204ENST00000430682 KCNH8Q96L42 1107 aa20.79■□□□□ 0.92
SMPD4-204ENST00000430682 CFAP43Q8NDM7 1665 aa20.78■□□□□ 0.92
SMPD4-204ENST00000430682 NUP153P49790 1475 aaKnown RBP20.78■□□□□ 0.92
SMPD4-204ENST00000430682 EFCAB5A4FU69 1503 aa20.77■□□□□ 0.92
SMPD4-204ENST00000430682 UBTFP17480 764 aaKnown RBP20.75■□□□□ 0.91
SMPD4-204ENST00000430682 CD109Q6YHK3 1445 aa20.71■□□□□ 0.91
SMPD4-204ENST00000430682 ARHGAP35Q9NRY4 1499 aa20.71■□□□□ 0.91
SMPD4-204ENST00000430682 TEX14Q8IWB6 1497 aa20.69■□□□□ 0.9
SMPD4-204ENST00000430682 MAGI3Q5TCQ9 1506 aa20.69■□□□□ 0.9
SMPD4-204ENST00000430682 ABCA9Q8IUA7 1624 aa20.68■□□□□ 0.9
SMPD4-204ENST00000430682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.89
SMPD4-204ENST00000430682 HNRNPUL2Q1KMD3 747 aaKnown RBP20.64■□□□□ 0.89
SMPD4-204ENST00000430682 AEBP2Q6ZN18 517 aaPredicted RBP20.63■□□□□ 0.89
SMPD4-204ENST00000430682 CDK13Q14004 1512 aaKnown RBP20.63■□□□□ 0.89
SMPD4-204ENST00000430682 LRRIQ1Q96JM4 1722 aa20.62■□□□□ 0.89
SMPD4-204ENST00000430682 KDM4FA0A1W2PPD8 638 aa20.6■□□□□ 0.89
SMPD4-204ENST00000430682 FMN1Q68DA7 1419 aa20.55■□□□□ 0.88
SMPD4-204ENST00000430682 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.54■□□□□ 0.88
SMPD4-204ENST00000430682 HECW1Q76N89 1606 aa20.54■□□□□ 0.88
SMPD4-204ENST00000430682 PLEKHD1A6NEE1 506 aa20.54■□□□□ 0.88
SMPD4-204ENST00000430682 TTC37Q6PGP7 1564 aa20.54■□□□□ 0.88
SMPD4-204ENST00000430682 ARAP3Q8WWN8 1544 aa20.53■□□□□ 0.88
SMPD4-204ENST00000430682 ATP1B4Q9UN42 357 aaPredicted RBP20.51■□□□□ 0.87
SMPD4-204ENST00000430682 PCF11O94913 1555 aaKnown RBP20.49■□□□□ 0.87
SMPD4-204ENST00000430682 FRMPD1Q5SYB0 1578 aa20.47■□□□□ 0.87
SMPD4-204ENST00000430682 NEO1Q92859 1461 aa20.47■□□□□ 0.87
SMPD4-204ENST00000430682 KIF14Q15058 1648 aa20.46■□□□□ 0.87
SMPD4-204ENST00000430682 ADGRL1O94910 1474 aa20.46■□□□□ 0.87
SMPD4-204ENST00000430682 RAPGEF3O95398 923 aa20.44■□□□□ 0.86
SMPD4-204ENST00000430682 PHLDB1Q86UU1 1377 aa20.43■□□□□ 0.86
SMPD4-204ENST00000430682 CLIP1P30622 1438 aa20.43■□□□□ 0.86
SMPD4-204ENST00000430682 RICTORQ6R327 1708 aa20.42■□□□□ 0.86
SMPD4-204ENST00000430682 CASKIN1Q8WXD9 1431 aa20.42■□□□□ 0.86
SMPD4-204ENST00000430682 FANCAO15360 1455 aa20.4■□□□□ 0.86
SMPD4-204ENST00000430682 MYO5CQ9NQX4 1742 aa20.39■□□□□ 0.86
SMPD4-204ENST00000430682 AKNAQ7Z591 1439 aa20.39■□□□□ 0.85
SMPD4-204ENST00000430682 TROQ12816 1431 aaPredicted RBP20.37■□□□□ 0.85
SMPD4-204ENST00000430682 CFAP74Q9C0B2 1584 aa20.37■□□□□ 0.85
SMPD4-204ENST00000430682 PLCH2O75038 1416 aa20.36■□□□□ 0.85
SMPD4-204ENST00000430682 CDC42BPBQ9Y5S2 1711 aa20.34■□□□□ 0.85
SMPD4-204ENST00000430682 FYCO1Q9BQS8 1478 aa20.34■□□□□ 0.85
SMPD4-204ENST00000430682 DENND4BO75064 1496 aaPredicted RBP20.33■□□□□ 0.85
SMPD4-204ENST00000430682 CDK11AQ9UQ88 783 aaPredicted RBP20.33■□□□□ 0.85
SMPD4-204ENST00000430682 CCDC18Q5T9S5 1454 aa20.32■□□□□ 0.84
SMPD4-204ENST00000430682 SIGLEC1Q9BZZ2 1709 aa20.3■□□□□ 0.84
SMPD4-204ENST00000430682 LOC105371045A0A1W2PR82 267 aa20.29■□□□□ 0.84
SMPD4-204ENST00000430682 CEP162Q5TB80 1403 aa20.28■□□□□ 0.84
SMPD4-204ENST00000430682 CDC42BPAQ5VT25 1732 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms