RNA–Protein interactions for RNA: ENST00000430408.1

CNOT10-204, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 3

Gene CNOT10, Length 687 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-204ENST00000430408 GRIN2AQ12879 1464 aa12.81□□□□□ -0.36
CNOT10-204ENST00000430408 RIMBP3CA6NJZ7 1639 aa12.8□□□□□ -0.36
CNOT10-204ENST00000430408 RIMBP3BA6NNM3 1639 aa12.8□□□□□ -0.36
CNOT10-204ENST00000430408 RIMBP3Q9UFD9 1639 aa12.8□□□□□ -0.36
CNOT10-204ENST00000430408 NUP160Q12769 1436 aa12.78□□□□□ -0.36
CNOT10-204ENST00000430408 IGF1RP08069 1367 aa12.77□□□□□ -0.37
CNOT10-204ENST00000430408 TRIM41Q8WV44 630 aa12.74□□□□□ -0.37
CNOT10-204ENST00000430408 CUL7Q14999 1698 aa12.73□□□□□ -0.37
CNOT10-204ENST00000430408 CEP170Q5SW79 1584 aa12.73□□□□□ -0.37
CNOT10-204ENST00000430408 ARAP1Q96P48 1450 aa12.7□□□□□ -0.38
CNOT10-204ENST00000430408 CYB5RLQ6IPT4 315 aa12.69□□□□□ -0.38
CNOT10-204ENST00000430408 CARMIL1Q5VZK9 1371 aa12.69□□□□□ -0.38
CNOT10-204ENST00000430408 SHROOM2Q13796 1616 aa12.67□□□□□ -0.38
CNOT10-204ENST00000430408 KIAA0586Q9BVV6 1533 aa12.65□□□□□ -0.38
CNOT10-204ENST00000430408 RUSC2Q8N2Y8 1516 aa12.64□□□□□ -0.39
CNOT10-204ENST00000430408 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
CNOT10-204ENST00000430408 RAPGEF2Q9Y4G8 1499 aa12.61□□□□□ -0.39
CNOT10-204ENST00000430408 PRG4Q92954 1404 aaPredicted RBP12.61□□□□□ -0.39
CNOT10-204ENST00000430408 RNF39Q9H2S5 420 aa12.6□□□□□ -0.39
CNOT10-204ENST00000430408 ERCC6L2Q5T890 1561 aa12.59□□□□□ -0.39
CNOT10-204ENST00000430408 EEA1Q15075 1411 aa12.57□□□□□ -0.4
CNOT10-204ENST00000430408 DCAF8L1A6NGE4 600 aa12.57□□□□□ -0.4
CNOT10-204ENST00000430408 PRXQ9BXM0 1461 aa12.56□□□□□ -0.4
CNOT10-204ENST00000430408 IQGAP2Q13576 1575 aa12.53□□□□□ -0.4
CNOT10-204ENST00000430408 CSRNP3Q8WYN3 585 aa12.53□□□□□ -0.4
CNOT10-204ENST00000430408 CARMIL2Q6F5E8 1435 aa12.52□□□□□ -0.41
CNOT10-204ENST00000430408 UGGT2Q9NYU1 1516 aa12.49□□□□□ -0.41
CNOT10-204ENST00000430408 TNIKQ9UKE5 1360 aa12.47□□□□□ -0.41
CNOT10-204ENST00000430408 C1QBPQ07021 282 aaKnown RBP12.47□□□□□ -0.41
CNOT10-204ENST00000430408 PTPRGP23470 1445 aa12.46□□□□□ -0.41
CNOT10-204ENST00000430408 CTTNBP2Q8WZ74 1663 aa12.45□□□□□ -0.42
CNOT10-204ENST00000430408 DISP1Q96F81 1524 aa12.45□□□□□ -0.42
CNOT10-204ENST00000430408 TRHP20396 242 aaPredicted RBP12.44□□□□□ -0.42
CNOT10-204ENST00000430408 GOLGA3Q08378 1498 aa12.43□□□□□ -0.42
CNOT10-204ENST00000430408 NPM1P06748 294 aaKnown RBP eCLIP12.42□□□□□ -0.42
CNOT10-204ENST00000430408 KIAA0556O60303 1618 aa12.4□□□□□ -0.42
CNOT10-204ENST00000430408 HOXD11P31277 338 aaPredicted RBP12.4□□□□□ -0.42
CNOT10-204ENST00000430408 KIF21BO75037 1637 aa12.4□□□□□ -0.42
CNOT10-204ENST00000430408 ADCY10Q96PN6 1610 aa12.4□□□□□ -0.42
CNOT10-204ENST00000430408 UHRF1BP1LA0JNW5 1464 aa12.4□□□□□ -0.43
CNOT10-204ENST00000430408 UACAQ9BZF9 1416 aa12.38□□□□□ -0.43
CNOT10-204ENST00000430408 MAPKBP1O60336 1514 aa12.38□□□□□ -0.43
CNOT10-204ENST00000430408 FAM9AQ8IZU1 332 aaPredicted RBP12.38□□□□□ -0.43
CNOT10-204ENST00000430408 ABCC2Q92887 1545 aa12.37□□□□□ -0.43
CNOT10-204ENST00000430408 TTBK1Q5TCY1 1321 aaPredicted RBP12.34□□□□□ -0.43
CNOT10-204ENST00000430408 ABCC10Q5T3U5 1492 aa12.33□□□□□ -0.44
CNOT10-204ENST00000430408 SAMD9Q5K651 1589 aa12.32□□□□□ -0.44
CNOT10-204ENST00000430408 KDM5BQ9UGL1 1544 aa12.32□□□□□ -0.44
CNOT10-204ENST00000430408 PLB1Q6P1J6 1458 aa12.3□□□□□ -0.44
CNOT10-204ENST00000430408 ABCA8O94911 1581 aa12.3□□□□□ -0.44
CNOT10-204ENST00000430408 FAM69CQ0P6D2 419 aa12.28□□□□□ -0.44
CNOT10-204ENST00000430408 KIF13AQ9H1H9 1805 aa12.27□□□□□ -0.44
CNOT10-204ENST00000430408 EFCAB5A4FU69 1503 aa12.27□□□□□ -0.44
CNOT10-204ENST00000430408 DIP2BQ9P265 1576 aa12.27□□□□□ -0.44
CNOT10-204ENST00000430408 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.45
CNOT10-204ENST00000430408 ASXL2Q76L83 1435 aa12.27□□□□□ -0.45
CNOT10-204ENST00000430408 P3H3Q8IVL6 736 aa12.25□□□□□ -0.45
CNOT10-204ENST00000430408 ZCCHC11Q5TAX3 1644 aaKnown RBP12.25□□□□□ -0.45
CNOT10-204ENST00000430408 GLI2P10070 1586 aa12.24□□□□□ -0.45
CNOT10-204ENST00000430408 EPRSP07814 1512 aaKnown RBP12.21□□□□□ -0.46
CNOT10-204ENST00000430408 WDR7Q9Y4E6 1490 aa12.21□□□□□ -0.46
CNOT10-204ENST00000430408 FHOD3Q2V2M9 1422 aa12.2□□□□□ -0.46
CNOT10-204ENST00000430408 RAPGEF6Q8TEU7 1601 aa12.2□□□□□ -0.46
CNOT10-204ENST00000430408 RANGAP1P46060 587 aaPredicted RBP12.2□□□□□ -0.46
CNOT10-204ENST00000430408 ATP10BO94823 1461 aa12.19□□□□□ -0.46
CNOT10-204ENST00000430408 ARHGAP35Q9NRY4 1499 aa12.17□□□□□ -0.46
CNOT10-204ENST00000430408 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
CNOT10-204ENST00000430408 RNF216Q9NWF9 866 aaPredicted RBP12.17□□□□□ -0.46
CNOT10-204ENST00000430408 FMN1Q68DA7 1419 aa12.17□□□□□ -0.46
CNOT10-204ENST00000430408 NUP153P49790 1475 aaKnown RBP12.16□□□□□ -0.46
CNOT10-204ENST00000430408 MAP3K4Q9Y6R4 1608 aa12.15□□□□□ -0.47
CNOT10-204ENST00000430408 TEX14Q8IWB6 1497 aa12.14□□□□□ -0.47
CNOT10-204ENST00000430408 PPP4R3CPQ6ZMV5 832 aa12.12□□□□□ -0.47
CNOT10-204ENST00000430408 PPRC1Q5VV67 1664 aaKnown RBP12.11□□□□□ -0.47
CNOT10-204ENST00000430408 CFAP43Q8NDM7 1665 aa12.11□□□□□ -0.47
CNOT10-204ENST00000430408 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.11□□□□□ -0.47
CNOT10-204ENST00000430408 HNRNPUL2Q1KMD3 747 aaKnown RBP12.11□□□□□ -0.47
CNOT10-204ENST00000430408 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
CNOT10-204ENST00000430408 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
CNOT10-204ENST00000430408 MAGI3Q5TCQ9 1506 aa12.11□□□□□ -0.47
CNOT10-204ENST00000430408 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
CNOT10-204ENST00000430408 TSPOAP1O95153 1857 aa12.1□□□□□ -0.47
CNOT10-204ENST00000430408 PLEKHD1A6NEE1 506 aa12.1□□□□□ -0.47
CNOT10-204ENST00000430408 ARID3CA6NKF2 412 aa12.1□□□□□ -0.47
CNOT10-204ENST00000430408 KDM6BO15054 1643 aa12.09□□□□□ -0.47
CNOT10-204ENST00000430408 CLIP1P30622 1438 aa12.09□□□□□ -0.47
CNOT10-204ENST00000430408 HECW1Q76N89 1606 aa12.08□□□□□ -0.48
CNOT10-204ENST00000430408 ABCA9Q8IUA7 1624 aa12.08□□□□□ -0.48
CNOT10-204ENST00000430408 POTEHQ6S545 545 aa12.07□□□□□ -0.48
CNOT10-204ENST00000430408 PHLDB1Q86UU1 1377 aa12.06□□□□□ -0.48
CNOT10-204ENST00000430408 CASKIN1Q8WXD9 1431 aa12.06□□□□□ -0.48
CNOT10-204ENST00000430408 CDK11AQ9UQ88 783 aaPredicted RBP12.06□□□□□ -0.48
CNOT10-204ENST00000430408 CDK13Q14004 1512 aaKnown RBP12.03□□□□□ -0.48
CNOT10-204ENST00000430408 ATP1B4Q9UN42 357 aaPredicted RBP12.03□□□□□ -0.48
CNOT10-204ENST00000430408 CCDC18Q5T9S5 1454 aa12.02□□□□□ -0.48
CNOT10-204ENST00000430408 NEO1Q92859 1461 aa12.02□□□□□ -0.49
CNOT10-204ENST00000430408 FYCO1Q9BQS8 1478 aa12.02□□□□□ -0.49
CNOT10-204ENST00000430408 COL17A1Q9UMD9 1497 aaPredicted RBP12.02□□□□□ -0.49
CNOT10-204ENST00000430408 CEP162Q5TB80 1403 aa12.01□□□□□ -0.49
CNOT10-204ENST00000430408 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms