RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 RIMBP3Q9UFD9 1639 aa24.83■■□□□ 1.56
KDM3A-204ENST00000427678 EEA1Q15075 1411 aa24.82■■□□□ 1.56
KDM3A-204ENST00000427678 FAM9AQ8IZU1 332 aaPredicted RBP24.81■■□□□ 1.56
KDM3A-204ENST00000427678 KIAA0586Q9BVV6 1533 aa24.79■■□□□ 1.56
KDM3A-204ENST00000427678 PRXQ9BXM0 1461 aa24.76■■□□□ 1.55
KDM3A-204ENST00000427678 PRG4Q92954 1404 aaPredicted RBP24.72■■□□□ 1.55
KDM3A-204ENST00000427678 ARAP1Q96P48 1450 aa24.7■■□□□ 1.54
KDM3A-204ENST00000427678 SHROOM2Q13796 1616 aa24.66■■□□□ 1.54
KDM3A-204ENST00000427678 ERCC6L2Q5T890 1561 aa24.61■■□□□ 1.53
KDM3A-204ENST00000427678 IQGAP2Q13576 1575 aa24.57■■□□□ 1.52
KDM3A-204ENST00000427678 CARMIL2Q6F5E8 1435 aa24.56■■□□□ 1.52
KDM3A-204ENST00000427678 PTPRGP23470 1445 aa24.48■■□□□ 1.51
KDM3A-204ENST00000427678 UGGT2Q9NYU1 1516 aa24.47■■□□□ 1.51
KDM3A-204ENST00000427678 TNIKQ9UKE5 1360 aa24.47■■□□□ 1.51
KDM3A-204ENST00000427678 TTBK1Q5TCY1 1321 aaPredicted RBP24.47■■□□□ 1.51
KDM3A-204ENST00000427678 UBTFP17480 764 aaKnown RBP24.47■■□□□ 1.51
KDM3A-204ENST00000427678 EHMT2Q96KQ7 1210 aa24.47■■□□□ 1.51
KDM3A-204ENST00000427678 KIF21BO75037 1637 aa24.43■■□□□ 1.5
KDM3A-204ENST00000427678 DISP1Q96F81 1524 aa24.43■■□□□ 1.5
KDM3A-204ENST00000427678 GOLGA3Q08378 1498 aa24.41■■□□□ 1.5
KDM3A-204ENST00000427678 CTTNBP2Q8WZ74 1663 aa24.39■■□□□ 1.49
KDM3A-204ENST00000427678 NPM1P06748 294 aaKnown RBP eCLIP24.38■■□□□ 1.49
KDM3A-204ENST00000427678 RANGAP1P46060 587 aaPredicted RBP24.38■■□□□ 1.49
KDM3A-204ENST00000427678 P3H3Q8IVL6 736 aa24.34■■□□□ 1.49
KDM3A-204ENST00000427678 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
KDM3A-204ENST00000427678 KIAA0556O60303 1618 aa24.31■■□□□ 1.48
KDM3A-204ENST00000427678 UACAQ9BZF9 1416 aa24.27■■□□□ 1.48
KDM3A-204ENST00000427678 UHRF1BP1LA0JNW5 1464 aa24.21■■□□□ 1.47
KDM3A-204ENST00000427678 ADCY10Q96PN6 1610 aa24.19■■□□□ 1.46
KDM3A-204ENST00000427678 SAMD9Q5K651 1589 aa24.16■■□□□ 1.46
KDM3A-204ENST00000427678 ABCC2Q92887 1545 aa24.16■■□□□ 1.46
KDM3A-204ENST00000427678 PLB1Q6P1J6 1458 aa24.15■■□□□ 1.46
KDM3A-204ENST00000427678 EFCAB5A4FU69 1503 aa24.13■■□□□ 1.45
KDM3A-204ENST00000427678 FHOD3Q2V2M9 1422 aa24.12■■□□□ 1.45
KDM3A-204ENST00000427678 KDM5BQ9UGL1 1544 aa24.08■■□□□ 1.45
KDM3A-204ENST00000427678 MAPKBP1O60336 1514 aa24.07■■□□□ 1.44
KDM3A-204ENST00000427678 LOC105371045A0A1W2PR82 267 aa24.07■■□□□ 1.44
KDM3A-204ENST00000427678 FAM69CQ0P6D2 419 aa24.07■■□□□ 1.44
KDM3A-204ENST00000427678 ABCA8O94911 1581 aa24.07■■□□□ 1.44
KDM3A-204ENST00000427678 ARHGAP35Q9NRY4 1499 aa24.05■■□□□ 1.44
KDM3A-204ENST00000427678 ASXL2Q76L83 1435 aa24.03■■□□□ 1.44
KDM3A-204ENST00000427678 ARID3CA6NKF2 412 aa24.03■■□□□ 1.44
KDM3A-204ENST00000427678 ABCC10Q5T3U5 1492 aa24■■□□□ 1.43
KDM3A-204ENST00000427678 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24■■□□□ 1.43
KDM3A-204ENST00000427678 HNRNPUL2Q1KMD3 747 aaKnown RBP24■■□□□ 1.43
KDM3A-204ENST00000427678 FMN1Q68DA7 1419 aa24■■□□□ 1.43
KDM3A-204ENST00000427678 CLIP1P30622 1438 aa23.99■■□□□ 1.43
KDM3A-204ENST00000427678 ATP1B4Q9UN42 357 aaPredicted RBP23.97■■□□□ 1.43
KDM3A-204ENST00000427678 ATP10BO94823 1461 aa23.96■■□□□ 1.43
KDM3A-204ENST00000427678 ZCCHC11Q5TAX3 1644 aaKnown RBP23.93■■□□□ 1.42
KDM3A-204ENST00000427678 RAPGEF6Q8TEU7 1601 aa23.93■■□□□ 1.42
KDM3A-204ENST00000427678 KCNH8Q96L42 1107 aa23.93■■□□□ 1.42
KDM3A-204ENST00000427678 NUP153P49790 1475 aaKnown RBP23.92■■□□□ 1.42
KDM3A-204ENST00000427678 WDR7Q9Y4E6 1490 aa23.89■■□□□ 1.42
KDM3A-204ENST00000427678 PLEKHD1A6NEE1 506 aa23.89■■□□□ 1.41
KDM3A-204ENST00000427678 CEP162Q5TB80 1403 aa23.87■■□□□ 1.41
KDM3A-204ENST00000427678 DIP2BQ9P265 1576 aa23.86■■□□□ 1.41
KDM3A-204ENST00000427678 EPRSP07814 1512 aaKnown RBP23.85■■□□□ 1.41
KDM3A-204ENST00000427678 CDK11AQ9UQ88 783 aaPredicted RBP23.83■■□□□ 1.41
KDM3A-204ENST00000427678 GLI2P10070 1586 aa23.81■■□□□ 1.4
KDM3A-204ENST00000427678 KIF13AQ9H1H9 1805 aa23.8■■□□□ 1.4
KDM3A-204ENST00000427678 CASKIN1Q8WXD9 1431 aa23.8■■□□□ 1.4
KDM3A-204ENST00000427678 HECW1Q76N89 1606 aa23.75■■□□□ 1.39
KDM3A-204ENST00000427678 CD109Q6YHK3 1445 aa23.72■■□□□ 1.39
KDM3A-204ENST00000427678 CDK13Q14004 1512 aaKnown RBP23.72■■□□□ 1.39
KDM3A-204ENST00000427678 FYCO1Q9BQS8 1478 aa23.69■■□□□ 1.38
KDM3A-204ENST00000427678 CCDC18Q5T9S5 1454 aa23.66■■□□□ 1.38
KDM3A-204ENST00000427678 PCF11O94913 1555 aaKnown RBP23.65■■□□□ 1.38
KDM3A-204ENST00000427678 TEX14Q8IWB6 1497 aa23.64■■□□□ 1.38
KDM3A-204ENST00000427678 MAP3K4Q9Y6R4 1608 aa23.63■■□□□ 1.37
KDM3A-204ENST00000427678 MAGI3Q5TCQ9 1506 aa23.62■■□□□ 1.37
KDM3A-204ENST00000427678 TSPOAP1O95153 1857 aa23.62■■□□□ 1.37
KDM3A-204ENST00000427678 TROQ12816 1431 aaPredicted RBP23.61■■□□□ 1.37
KDM3A-204ENST00000427678 VPS8Q8N3P4 1428 aa23.59■■□□□ 1.37
KDM3A-204ENST00000427678 CFAP43Q8NDM7 1665 aa23.57■■□□□ 1.36
KDM3A-204ENST00000427678 ABCA9Q8IUA7 1624 aa23.57■■□□□ 1.36
KDM3A-204ENST00000427678 PHLDB1Q86UU1 1377 aa23.54■■□□□ 1.36
KDM3A-204ENST00000427678 PPRC1Q5VV67 1664 aaKnown RBP23.53■■□□□ 1.36
KDM3A-204ENST00000427678 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.53■■□□□ 1.361e-7■■□□□ 13.1
KDM3A-204ENST00000427678 MTUS2Q5JR59 1369 aa23.51■■□□□ 1.35
KDM3A-204ENST00000427678 LRRIQ1Q96JM4 1722 aa23.5■■□□□ 1.35
KDM3A-204ENST00000427678 PLCH2O75038 1416 aa23.49■■□□□ 1.35
KDM3A-204ENST00000427678 KDM6BO15054 1643 aa23.48■■□□□ 1.35
KDM3A-204ENST00000427678 APLP2Q06481 763 aa23.48■■□□□ 1.35
KDM3A-204ENST00000427678 EFCAB2Q5VUJ9 269 aa23.48■■□□□ 1.35
KDM3A-204ENST00000427678 COL17A1Q9UMD9 1497 aaPredicted RBP23.48■■□□□ 1.35
KDM3A-204ENST00000427678 NEO1Q92859 1461 aa23.47■■□□□ 1.35
KDM3A-204ENST00000427678 KIF14Q15058 1648 aa23.45■■□□□ 1.34
KDM3A-204ENST00000427678 TTC37Q6PGP7 1564 aa23.44■■□□□ 1.34
KDM3A-204ENST00000427678 FANCAO15360 1455 aa23.43■■□□□ 1.34
KDM3A-204ENST00000427678 ARAP3Q8WWN8 1544 aa23.42■■□□□ 1.34
KDM3A-204ENST00000427678 AKNAQ7Z591 1439 aa23.42■■□□□ 1.34
KDM3A-204ENST00000427678 RAPGEF3O95398 923 aa23.39■■□□□ 1.33
KDM3A-204ENST00000427678 CCNB3Q8WWL7 1395 aa23.37■■□□□ 1.33
KDM3A-204ENST00000427678 MAP3K1Q13233 1512 aa23.36■■□□□ 1.33
KDM3A-204ENST00000427678 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
KDM3A-204ENST00000427678 CFDP1Q9UEE9 299 aaPredicted RBP23.35■■□□□ 1.33
KDM3A-204ENST00000427678 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
KDM3A-204ENST00000427678 EHBP1L1Q8N3D4 1523 aa23.33■■□□□ 1.33
KDM3A-204ENST00000427678 ARHGAP5Q13017 1502 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms