RNA–Protein interactions for RNA: ENST00000427678.1

KDM3A-204, Transcript of lysine demethylase 3A, humanhuman

TSL 2

Gene KDM3A, Length 565 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3A-204ENST00000427678 NISCHQ9Y2I1 1504 aa35.77■■■■□ 3.32
KDM3A-204ENST00000427678 CCDC180Q9P1Z9 1646 aa31.62■■■□□ 2.65
KDM3A-204ENST00000427678 ABCC9O60706 1549 aa31.02■■■□□ 2.56
KDM3A-204ENST00000427678 DCAF8L2P0C7V8 631 aa30.08■■■□□ 2.41
KDM3A-204ENST00000427678 NACADO15069 1562 aa29.83■■■□□ 2.37
KDM3A-204ENST00000427678 RB1CC1Q8TDY2 1594 aa29.82■■■□□ 2.36
KDM3A-204ENST00000427678 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
KDM3A-204ENST00000427678 MYO15BQ96JP2 1530 aa29.69■■■□□ 2.34
KDM3A-204ENST00000427678 DCAF1Q9Y4B6 1507 aa29.58■■■□□ 2.33
KDM3A-204ENST00000427678 PABPN1Q86U42 306 aaKnown RBP eCLIP29.11■■■□□ 2.25
KDM3A-204ENST00000427678 UNC13AQ9UPW8 1703 aa28.94■■■□□ 2.22
KDM3A-204ENST00000427678 SCRIBQ14160 1630 aa28.92■■■□□ 2.22
KDM3A-204ENST00000427678 BICRAQ9NZM4 1560 aa28.87■■■□□ 2.21
KDM3A-204ENST00000427678 SHROOM4Q9ULL8 1493 aa28.63■■■□□ 2.17
KDM3A-204ENST00000427678 DNAJC5BQ9UF47 199 aa28.47■■■□□ 2.15
KDM3A-204ENST00000427678 EIF4G1Q04637 1599 aaKnown RBP28.13■■■□□ 2.09
KDM3A-204ENST00000427678 CC2D2AQ9P2K1 1620 aa27.99■■■□□ 2.07
KDM3A-204ENST00000427678 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
KDM3A-204ENST00000427678 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.03
KDM3A-204ENST00000427678 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
KDM3A-204ENST00000427678 NCAPD3P42695 1498 aa27.59■■■□□ 2.01
KDM3A-204ENST00000427678 ATAD2BQ9ULI0 1458 aa27.59■■■□□ 2.01
KDM3A-204ENST00000427678 MROH2BQ7Z745 1585 aa27.56■■■□□ 2
KDM3A-204ENST00000427678 SMARCA2P51531 1590 aa27.53■■■□□ 2
KDM3A-204ENST00000427678 PEG3Q9GZU2 1588 aa27.4■■□□□ 1.98
KDM3A-204ENST00000427678 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
KDM3A-204ENST00000427678 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
KDM3A-204ENST00000427678 RSF1Q96T23 1441 aaPredicted RBP27.34■■□□□ 1.97
KDM3A-204ENST00000427678 WIZO95785 1651 aa27.2■■□□□ 1.94
KDM3A-204ENST00000427678 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
KDM3A-204ENST00000427678 NESP48681 1621 aa26.84■■□□□ 1.89
KDM3A-204ENST00000427678 SUPT5HO00267 1087 aaKnown RBP26.83■■□□□ 1.89
KDM3A-204ENST00000427678 CADPSQ9ULU8 1353 aa26.83■■□□□ 1.88
KDM3A-204ENST00000427678 ERCC6Q03468 1493 aa26.76■■□□□ 1.87
KDM3A-204ENST00000427678 LAMC3Q9Y6N6 1575 aa26.75■■□□□ 1.87
KDM3A-204ENST00000427678 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
KDM3A-204ENST00000427678 PDS5BQ9NTI5 1447 aa26.7■■□□□ 1.86
KDM3A-204ENST00000427678 CFTRP13569 1480 aa26.63■■□□□ 1.85
KDM3A-204ENST00000427678 FANCD2Q9BXW9 1451 aa26.46■■□□□ 1.83
KDM3A-204ENST00000427678 CUX2O14529 1486 aa26.4■■□□□ 1.82
KDM3A-204ENST00000427678 CEP164Q9UPV0 1460 aa26.4■■□□□ 1.82
KDM3A-204ENST00000427678 KIF21AQ7Z4S6 1674 aa26.38■■□□□ 1.81
KDM3A-204ENST00000427678 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
KDM3A-204ENST00000427678 THOC2Q8NI27 1593 aaKnown RBP26.3■■□□□ 1.8
KDM3A-204ENST00000427678 WDR62O43379 1518 aa26.2■■□□□ 1.79
KDM3A-204ENST00000427678 PRDM2Q13029 1718 aa26.17■■□□□ 1.78
KDM3A-204ENST00000427678 URB2Q14146 1524 aaKnown RBP26.14■■□□□ 1.78
KDM3A-204ENST00000427678 ABCC8Q09428 1581 aa26.08■■□□□ 1.77
KDM3A-204ENST00000427678 TOPBP1Q92547 1522 aa26.02■■□□□ 1.76
KDM3A-204ENST00000427678 DNMBPQ6XZF7 1577 aa25.95■■□□□ 1.75
KDM3A-204ENST00000427678 IFT140Q96RY7 1462 aa25.87■■□□□ 1.73
KDM3A-204ENST00000427678 CUX1P39880 1505 aa25.83■■□□□ 1.73
KDM3A-204ENST00000427678 POLA1P09884 1462 aaPredicted RBP25.8■■□□□ 1.72
KDM3A-204ENST00000427678 SOGA1O94964 1423 aa25.8■■□□□ 1.72
KDM3A-204ENST00000427678 WRNQ14191 1432 aaPredicted RBP eCLIP25.79■■□□□ 1.72
KDM3A-204ENST00000427678 FGD5Q6ZNL6 1462 aa25.76■■□□□ 1.71
KDM3A-204ENST00000427678 ZNF608Q9ULD9 1512 aaPredicted RBP25.72■■□□□ 1.71
KDM3A-204ENST00000427678 RAD54L2Q9Y4B4 1467 aa25.72■■□□□ 1.71
KDM3A-204ENST00000427678 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
KDM3A-204ENST00000427678 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
KDM3A-204ENST00000427678 AQRO60306 1485 aaKnown RBP eCLIP25.64■■□□□ 1.696e-8■■■□□ 17.1
KDM3A-204ENST00000427678 DNAJC5Q9H3Z4 198 aa25.63■■□□□ 1.69
KDM3A-204ENST00000427678 TOP2BQ02880 1626 aa25.61■■□□□ 1.69
KDM3A-204ENST00000427678 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
KDM3A-204ENST00000427678 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
KDM3A-204ENST00000427678 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
KDM3A-204ENST00000427678 EIF4G3O43432 1585 aaKnown RBP25.52■■□□□ 1.68
KDM3A-204ENST00000427678 OSCARQ8IYS5 282 aa25.5■■□□□ 1.67
KDM3A-204ENST00000427678 WDR97A6NE52 1622 aa25.47■■□□□ 1.67
KDM3A-204ENST00000427678 GAPVD1Q14C86 1478 aa25.45■■□□□ 1.66
KDM3A-204ENST00000427678 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
KDM3A-204ENST00000427678 FBLN2P98095 1184 aa25.42■■□□□ 1.66
KDM3A-204ENST00000427678 CHMP7Q8WUX9 453 aaPredicted RBP25.37■■□□□ 1.65
KDM3A-204ENST00000427678 TRIM41Q8WV44 630 aa25.37■■□□□ 1.65
KDM3A-204ENST00000427678 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
KDM3A-204ENST00000427678 MAGI1Q96QZ7 1491 aaPredicted RBP25.33■■□□□ 1.65
KDM3A-204ENST00000427678 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
KDM3A-204ENST00000427678 KIF27Q86VH2 1401 aa25.27■■□□□ 1.64
KDM3A-204ENST00000427678 SYNJ2O15056 1496 aa25.25■■□□□ 1.63
KDM3A-204ENST00000427678 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.62
KDM3A-204ENST00000427678 PBRM1Q86U86 1689 aa25.19■■□□□ 1.62
KDM3A-204ENST00000427678 IGF1RP08069 1367 aa25.18■■□□□ 1.62
KDM3A-204ENST00000427678 FHAD1B1AJZ9 1412 aa25.18■■□□□ 1.62
KDM3A-204ENST00000427678 CHD1O14646 1710 aa25.13■■□□□ 1.61
KDM3A-204ENST00000427678 CHIC1Q5VXU3 224 aa25.08■■□□□ 1.61
KDM3A-204ENST00000427678 ADAMTS12P58397 1594 aa25.07■■□□□ 1.6
KDM3A-204ENST00000427678 GRIN2AQ12879 1464 aa25.07■■□□□ 1.6
KDM3A-204ENST00000427678 CARMIL1Q5VZK9 1371 aa25.03■■□□□ 1.6
KDM3A-204ENST00000427678 RUSC2Q8N2Y8 1516 aa25■■□□□ 1.59
KDM3A-204ENST00000427678 NUP160Q12769 1436 aa24.97■■□□□ 1.59
KDM3A-204ENST00000427678 CLASP1Q7Z460 1538 aa24.94■■□□□ 1.58
KDM3A-204ENST00000427678 CUL7Q14999 1698 aa24.92■■□□□ 1.58
KDM3A-204ENST00000427678 CSRNP3Q8WYN3 585 aa24.89■■□□□ 1.58
KDM3A-204ENST00000427678 ARHGEF11O15085 1522 aa24.89■■□□□ 1.57
KDM3A-204ENST00000427678 CEP170Q5SW79 1584 aa24.88■■□□□ 1.57
KDM3A-204ENST00000427678 JPH4Q96JJ6 628 aa24.85■■□□□ 1.57
KDM3A-204ENST00000427678 CYB5RLQ6IPT4 315 aa24.84■■□□□ 1.57
KDM3A-204ENST00000427678 RAPGEF2Q9Y4G8 1499 aa24.83■■□□□ 1.57
KDM3A-204ENST00000427678 RIMBP3CA6NJZ7 1639 aa24.83■■□□□ 1.56
KDM3A-204ENST00000427678 RIMBP3BA6NNM3 1639 aa24.83■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms