RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 ARAP1Q96P48 1450 aa13.29□□□□□ -0.28
SH3D19-204ENST00000427414 ARHGAP35Q9NRY4 1499 aa13.28□□□□□ -0.28
SH3D19-204ENST00000427414 SAMD9Q5K651 1589 aa13.27□□□□□ -0.28
SH3D19-204ENST00000427414 AQRO60306 1485 aaKnown RBP eCLIP13.27□□□□□ -0.292e-8■■■■□ 26.3
SH3D19-204ENST00000427414 ZNF608Q9ULD9 1512 aaPredicted RBP13.23□□□□□ -0.29
SH3D19-204ENST00000427414 SYNJ2O15056 1496 aa13.23□□□□□ -0.29
SH3D19-204ENST00000427414 UGGT2Q9NYU1 1516 aa13.21□□□□□ -0.29
SH3D19-204ENST00000427414 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
SH3D19-204ENST00000427414 IQGAP2Q13576 1575 aa13.21□□□□□ -0.3
SH3D19-204ENST00000427414 KIAA0586Q9BVV6 1533 aa13.2□□□□□ -0.3
SH3D19-204ENST00000427414 GRIN2AQ12879 1464 aa13.2□□□□□ -0.3
SH3D19-204ENST00000427414 SNAPC4Q5SXM2 1469 aa13.19□□□□□ -0.3
SH3D19-204ENST00000427414 FMN1Q68DA7 1419 aa13.18□□□□□ -0.3
SH3D19-204ENST00000427414 FYCO1Q9BQS8 1478 aa13.18□□□□□ -0.3
SH3D19-204ENST00000427414 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
SH3D19-204ENST00000427414 NUP160Q12769 1436 aa13.16□□□□□ -0.3
SH3D19-204ENST00000427414 CFAP43Q8NDM7 1665 aa13.16□□□□□ -0.3
SH3D19-204ENST00000427414 CASKIN1Q8WXD9 1431 aa13.15□□□□□ -0.3
SH3D19-204ENST00000427414 APLP2Q06481 763 aa13.12□□□□□ -0.31
SH3D19-204ENST00000427414 TIAM1Q13009 1591 aa13.12□□□□□ -0.31
SH3D19-204ENST00000427414 PCF11O94913 1555 aaKnown RBP13.08□□□□□ -0.32
SH3D19-204ENST00000427414 CEP170Q5SW79 1584 aa13.08□□□□□ -0.32
SH3D19-204ENST00000427414 KIAA0556O60303 1618 aa13.07□□□□□ -0.32
SH3D19-204ENST00000427414 CCDC18Q5T9S5 1454 aa13.07□□□□□ -0.32
SH3D19-204ENST00000427414 HECW1Q76N89 1606 aa13.05□□□□□ -0.32
SH3D19-204ENST00000427414 ZEB1P37275 1124 aaPredicted RBP13.03□□□□□ -0.32
SH3D19-204ENST00000427414 DISP1Q96F81 1524 aa13.03□□□□□ -0.32
SH3D19-204ENST00000427414 SHROOM2Q13796 1616 aa13.03□□□□□ -0.32
SH3D19-204ENST00000427414 LRRC9Q6ZRR7 1453 aa13.03□□□□□ -0.32
SH3D19-204ENST00000427414 FHOD3Q2V2M9 1422 aa13.02□□□□□ -0.32
SH3D19-204ENST00000427414 CHMP7Q8WUX9 453 aaPredicted RBP13.02□□□□□ -0.32
SH3D19-204ENST00000427414 CARMIL2Q6F5E8 1435 aa13.02□□□□□ -0.33
SH3D19-204ENST00000427414 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.33
SH3D19-204ENST00000427414 CHD1O14646 1710 aa13.01□□□□□ -0.33
SH3D19-204ENST00000427414 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13□□□□□ -0.33
SH3D19-204ENST00000427414 SCAF1Q9H7N4 1312 aaKnown RBP12.99□□□□□ -0.33
SH3D19-204ENST00000427414 EHBP1L1Q8N3D4 1523 aa12.98□□□□□ -0.33
SH3D19-204ENST00000427414 RAPGEF6Q8TEU7 1601 aa12.96□□□□□ -0.34
SH3D19-204ENST00000427414 LRRIQ1Q96JM4 1722 aa12.96□□□□□ -0.34
SH3D19-204ENST00000427414 CLASP1Q7Z460 1538 aa12.95□□□□□ -0.34
SH3D19-204ENST00000427414 SUPT6HQ7KZ85 1726 aaKnown RBP12.93□□□□□ -0.34
SH3D19-204ENST00000427414 ARHGEF11O15085 1522 aa12.93□□□□□ -0.34
SH3D19-204ENST00000427414 EPRSP07814 1512 aaKnown RBP12.92□□□□□ -0.34
SH3D19-204ENST00000427414 JPH4Q96JJ6 628 aa12.91□□□□□ -0.34
SH3D19-204ENST00000427414 ABCA8O94911 1581 aa12.91□□□□□ -0.34
SH3D19-204ENST00000427414 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
SH3D19-204ENST00000427414 KANK4Q5T7N3 995 aaPredicted RBP12.89□□□□□ -0.35
SH3D19-204ENST00000427414 ADCY10Q96PN6 1610 aa12.88□□□□□ -0.35
SH3D19-204ENST00000427414 CCNB3Q8WWL7 1395 aa12.88□□□□□ -0.35
SH3D19-204ENST00000427414 NUP153P49790 1475 aaKnown RBP12.86□□□□□ -0.35
SH3D19-204ENST00000427414 P3H3Q8IVL6 736 aa12.85□□□□□ -0.35
SH3D19-204ENST00000427414 MIA2Q96PC5 1412 aa12.84□□□□□ -0.35
SH3D19-204ENST00000427414 MTUS2Q5JR59 1369 aa12.84□□□□□ -0.35
SH3D19-204ENST00000427414 PRG4Q92954 1404 aaPredicted RBP12.83□□□□□ -0.36
SH3D19-204ENST00000427414 UHRF1BP1LA0JNW5 1464 aa12.83□□□□□ -0.36
SH3D19-204ENST00000427414 TCOF1Q13428 1488 aaKnown RBP12.83□□□□□ -0.36
SH3D19-204ENST00000427414 CDK11AQ9UQ88 783 aaPredicted RBP12.83□□□□□ -0.36
SH3D19-204ENST00000427414 NCOA2Q15596 1464 aa12.82□□□□□ -0.36
SH3D19-204ENST00000427414 MYOM3Q5VTT5 1437 aa12.82□□□□□ -0.36
SH3D19-204ENST00000427414 ACIN1Q9UKV3 1341 aaKnown RBP12.81□□□□□ -0.36
SH3D19-204ENST00000427414 FBLN2P98095 1184 aa12.81□□□□□ -0.36
SH3D19-204ENST00000427414 PHLDB1Q86UU1 1377 aa12.8□□□□□ -0.36
SH3D19-204ENST00000427414 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
SH3D19-204ENST00000427414 ITSN2Q9NZM3 1697 aa12.8□□□□□ -0.36
SH3D19-204ENST00000427414 MAGI3Q5TCQ9 1506 aa12.8□□□□□ -0.36
SH3D19-204ENST00000427414 CLSPNQ9HAW4 1339 aa12.79□□□□□ -0.36
SH3D19-204ENST00000427414 TROQ12816 1431 aaPredicted RBP12.79□□□□□ -0.36
SH3D19-204ENST00000427414 PTPRGP23470 1445 aa12.79□□□□□ -0.36
SH3D19-204ENST00000427414 ABCC2Q92887 1545 aa12.77□□□□□ -0.36
SH3D19-204ENST00000427414 UACAQ9BZF9 1416 aa12.77□□□□□ -0.37
SH3D19-204ENST00000427414 AKNAQ7Z591 1439 aa12.76□□□□□ -0.37
SH3D19-204ENST00000427414 CDK13Q14004 1512 aaKnown RBP12.76□□□□□ -0.37
SH3D19-204ENST00000427414 PTPN23Q9H3S7 1636 aa12.76□□□□□ -0.37
SH3D19-204ENST00000427414 PLB1Q6P1J6 1458 aa12.75□□□□□ -0.37
SH3D19-204ENST00000427414 ATP10BO94823 1461 aa12.74□□□□□ -0.37
SH3D19-204ENST00000427414 KIF14Q15058 1648 aa12.73□□□□□ -0.37
SH3D19-204ENST00000427414 ATP1B4Q9UN42 357 aaPredicted RBP12.71□□□□□ -0.38
SH3D19-204ENST00000427414 KDM5BQ9UGL1 1544 aa12.7□□□□□ -0.38
SH3D19-204ENST00000427414 ABCC10Q5T3U5 1492 aa12.69□□□□□ -0.38
SH3D19-204ENST00000427414 MYT1Q01538 1121 aa12.68□□□□□ -0.38
SH3D19-204ENST00000427414 NEUROD1Q13562 356 aa12.68□□□□□ -0.38
SH3D19-204ENST00000427414 SETD5Q9C0A6 1442 aa12.67□□□□□ -0.38
SH3D19-204ENST00000427414 DNMT1P26358 1616 aaKnown RBP12.67□□□□□ -0.38
SH3D19-204ENST00000427414 GCC2Q8IWJ2 1684 aa12.67□□□□□ -0.38
SH3D19-204ENST00000427414 ARAP3Q8WWN8 1544 aa12.66□□□□□ -0.38
SH3D19-204ENST00000427414 ROCK1Q13464 1354 aa12.66□□□□□ -0.38
SH3D19-204ENST00000427414 HFM1A2PYH4 1435 aa12.66□□□□□ -0.38
SH3D19-204ENST00000427414 PLEKHD1A6NEE1 506 aa12.66□□□□□ -0.38
SH3D19-204ENST00000427414 OSCARQ8IYS5 282 aa12.65□□□□□ -0.38
SH3D19-204ENST00000427414 ERCC6L2Q5T890 1561 aa12.65□□□□□ -0.38
SH3D19-204ENST00000427414 CDC42BPAQ5VT25 1732 aa12.65□□□□□ -0.38
SH3D19-204ENST00000427414 TTBK1Q5TCY1 1321 aaPredicted RBP12.65□□□□□ -0.39
SH3D19-204ENST00000427414 GPATCH8Q9UKJ3 1502 aaKnown RBP12.64□□□□□ -0.39
SH3D19-204ENST00000427414 ZCCHC11Q5TAX3 1644 aaKnown RBP12.64□□□□□ -0.39
SH3D19-204ENST00000427414 PREX2Q70Z35 1606 aa12.64□□□□□ -0.39
SH3D19-204ENST00000427414 CROCC2H7BZ55 1655 aa12.63□□□□□ -0.39
SH3D19-204ENST00000427414 ARHGEF5Q12774 1597 aa12.63□□□□□ -0.39
SH3D19-204ENST00000427414 SHANK2Q9UPX8 1470 aa12.63□□□□□ -0.39
SH3D19-204ENST00000427414 ADGBQ8N7X0 1667 aa12.62□□□□□ -0.39
SH3D19-204ENST00000427414 GTF3C3Q9Y5Q9 886 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms