RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 DNAJC5BQ9UF47 199 aa28.81■■■□□ 2.2
SNX17-202ENST00000427123 PCF11O94913 1555 aaKnown RBP28.8■■■□□ 2.2
SNX17-202ENST00000427123 GAPVD1Q14C86 1478 aa28.77■■■□□ 2.2
SNX17-202ENST00000427123 CCNB3Q8WWL7 1395 aa28.75■■■□□ 2.19
SNX17-202ENST00000427123 TARBP1Q13395 1621 aaKnown RBP28.75■■■□□ 2.19
SNX17-202ENST00000427123 LRRC9Q6ZRR7 1453 aa28.74■■■□□ 2.19
SNX17-202ENST00000427123 FYCO1Q9BQS8 1478 aa28.72■■■□□ 2.19
SNX17-202ENST00000427123 TDRD9Q8NDG6 1382 aaKnown RBP28.71■■■□□ 2.19
SNX17-202ENST00000427123 AQRO60306 1485 aaKnown RBP eCLIP28.7■■■□□ 2.193e-7■■■■■ 31
SNX17-202ENST00000427123 FHOD3Q2V2M9 1422 aa28.69■■■□□ 2.18
SNX17-202ENST00000427123 CASKIN1Q8WXD9 1431 aa28.65■■■□□ 2.18
SNX17-202ENST00000427123 CLSPNQ9HAW4 1339 aa28.65■■■□□ 2.18
SNX17-202ENST00000427123 SAMD9Q5K651 1589 aa28.64■■■□□ 2.18
SNX17-202ENST00000427123 MRC2Q9UBG0 1479 aa28.63■■■□□ 2.17
SNX17-202ENST00000427123 PBRM1Q86U86 1689 aa28.62■■■□□ 2.17
SNX17-202ENST00000427123 P3H3Q8IVL6 736 aa28.6■■■□□ 2.17
SNX17-202ENST00000427123 DHX57Q6P158 1386 aaKnown RBP28.6■■■□□ 2.17
SNX17-202ENST00000427123 FMN1Q68DA7 1419 aa28.6■■■□□ 2.17
SNX17-202ENST00000427123 DIEXFQ68CQ4 756 aaKnown RBP28.56■■■□□ 2.16
SNX17-202ENST00000427123 ZNF316A6NFI3 1004 aaPredicted RBP28.54■■■□□ 2.16
SNX17-202ENST00000427123 SNAPC4Q5SXM2 1469 aa28.54■■■□□ 2.16
SNX17-202ENST00000427123 PHLDB1Q86UU1 1377 aa28.53■■■□□ 2.16
SNX17-202ENST00000427123 ADAMTS12P58397 1594 aa28.49■■■□□ 2.15
SNX17-202ENST00000427123 THOC2Q8NI27 1593 aaKnown RBP28.47■■■□□ 2.15
SNX17-202ENST00000427123 WDR62O43379 1518 aa28.45■■■□□ 2.15
SNX17-202ENST00000427123 ATP1B4Q9UN42 357 aaPredicted RBP28.44■■■□□ 2.14
SNX17-202ENST00000427123 LRRIQ1Q96JM4 1722 aa28.41■■■□□ 2.14
SNX17-202ENST00000427123 GRIN2BQ13224 1484 aa28.4■■■□□ 2.14
SNX17-202ENST00000427123 IFT140Q96RY7 1462 aa28.4■■■□□ 2.14
SNX17-202ENST00000427123 ITGAEP38570 1179 aa28.38■■■□□ 2.13
SNX17-202ENST00000427123 IQGAP2Q13576 1575 aa28.37■■■□□ 2.13
SNX17-202ENST00000427123 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP28.37■■■□□ 2.13
SNX17-202ENST00000427123 RAB3GAP2Q9H2M9 1393 aa28.36■■■□□ 2.13
SNX17-202ENST00000427123 SETD5Q9C0A6 1442 aa28.34■■■□□ 2.13
SNX17-202ENST00000427123 FAM50AQ14320 339 aaKnown RBP28.3■■■□□ 2.12
SNX17-202ENST00000427123 MTUS2Q5JR59 1369 aa28.28■■■□□ 2.12
SNX17-202ENST00000427123 EHBP1L1Q8N3D4 1523 aa28.28■■■□□ 2.12
SNX17-202ENST00000427123 FGD6Q6ZV73 1430 aa28.26■■■□□ 2.12
SNX17-202ENST00000427123 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
SNX17-202ENST00000427123 CCDC18Q5T9S5 1454 aa28.26■■■□□ 2.11
SNX17-202ENST00000427123 SUPT6HQ7KZ85 1726 aaKnown RBP28.26■■■□□ 2.11
SNX17-202ENST00000427123 HECW1Q76N89 1606 aa28.25■■■□□ 2.11
SNX17-202ENST00000427123 MAPKBP1O60336 1514 aa28.24■■■□□ 2.11
SNX17-202ENST00000427123 UGGT2Q9NYU1 1516 aa28.22■■■□□ 2.11
SNX17-202ENST00000427123 EIF4G3O43432 1585 aaKnown RBP28.21■■■□□ 2.11
SNX17-202ENST00000427123 NCOA2Q15596 1464 aa28.2■■■□□ 2.1
SNX17-202ENST00000427123 ERCC6Q03468 1493 aa28.18■■■□□ 2.1
SNX17-202ENST00000427123 MYOM3Q5VTT5 1437 aa28.15■■■□□ 2.1
SNX17-202ENST00000427123 ARHGEF11O15085 1522 aa28.14■■■□□ 2.1
SNX17-202ENST00000427123 MAGI3Q5TCQ9 1506 aa28.12■■■□□ 2.09
SNX17-202ENST00000427123 KIAA0586Q9BVV6 1533 aa28.11■■■□□ 2.09
SNX17-202ENST00000427123 GRIN2AQ12879 1464 aa28.09■■■□□ 2.09
SNX17-202ENST00000427123 EPRSP07814 1512 aaKnown RBP28.08■■■□□ 2.09
SNX17-202ENST00000427123 KIAA0556O60303 1618 aa28.08■■■□□ 2.09
SNX17-202ENST00000427123 PTPN23Q9H3S7 1636 aa28.06■■■□□ 2.08
SNX17-202ENST00000427123 MAGI1Q96QZ7 1491 aaPredicted RBP28.06■■■□□ 2.08
SNX17-202ENST00000427123 CENPBP07199 599 aaPredicted RBP28.03■■■□□ 2.08
SNX17-202ENST00000427123 ACIN1Q9UKV3 1341 aaKnown RBP28.02■■■□□ 2.08
SNX17-202ENST00000427123 HFM1A2PYH4 1435 aa28.02■■■□□ 2.08
SNX17-202ENST00000427123 DISP1Q96F81 1524 aa28.01■■■□□ 2.07
SNX17-202ENST00000427123 SCAF1Q9H7N4 1312 aaKnown RBP28■■■□□ 2.07
SNX17-202ENST00000427123 TCOF1Q13428 1488 aaKnown RBP27.99■■■□□ 2.07
SNX17-202ENST00000427123 CDK13Q14004 1512 aaKnown RBP27.99■■■□□ 2.07
SNX17-202ENST00000427123 PTPRKQ15262 1439 aa27.98■■■□□ 2.07
SNX17-202ENST00000427123 MIER1Q8N108 512 aa27.96■■■□□ 2.07
SNX17-202ENST00000427123 SYNJ2O15056 1496 aa27.95■■■□□ 2.07
SNX17-202ENST00000427123 NEUROD1Q13562 356 aa27.93■■■□□ 2.06
SNX17-202ENST00000427123 RAPGEF6Q8TEU7 1601 aa27.93■■■□□ 2.06
SNX17-202ENST00000427123 CEP170Q5SW79 1584 aa27.92■■■□□ 2.06
SNX17-202ENST00000427123 NAIPQ13075 1403 aa27.9■■■□□ 2.06
SNX17-202ENST00000427123 MIA2Q96PC5 1412 aa27.89■■■□□ 2.06
SNX17-202ENST00000427123 TIMELESSQ9UNS1 1208 aa27.89■■■□□ 2.05
SNX17-202ENST00000427123 UACAQ9BZF9 1416 aa27.89■■■□□ 2.05
SNX17-202ENST00000427123 GCC2Q8IWJ2 1684 aa27.88■■■□□ 2.05
SNX17-202ENST00000427123 NUP153P49790 1475 aaKnown RBP27.86■■■□□ 2.05
SNX17-202ENST00000427123 AKNAQ7Z591 1439 aa27.84■■■□□ 2.05
SNX17-202ENST00000427123 CHMP7Q8WUX9 453 aaPredicted RBP27.82■■■□□ 2.04
SNX17-202ENST00000427123 SIN3AQ96ST3 1273 aa27.82■■■□□ 2.04
SNX17-202ENST00000427123 NUP160Q12769 1436 aa27.81■■■□□ 2.04
SNX17-202ENST00000427123 ARID3CA6NKF2 412 aa27.73■■■□□ 2.03
SNX17-202ENST00000427123 CARMIL2Q6F5E8 1435 aa27.72■■■□□ 2.03
SNX17-202ENST00000427123 CDK11AQ9UQ88 783 aaPredicted RBP27.7■■■□□ 2.02
SNX17-202ENST00000427123 DNMT1P26358 1616 aaKnown RBP27.69■■■□□ 2.02
SNX17-202ENST00000427123 YTHDC1Q96MU7 727 aaKnown RBP27.68■■■□□ 2.02
SNX17-202ENST00000427123 ADCY10Q96PN6 1610 aa27.67■■■□□ 2.02
SNX17-202ENST00000427123 TROQ12816 1431 aaPredicted RBP27.66■■■□□ 2.02
SNX17-202ENST00000427123 FBLN2P98095 1184 aa27.66■■■□□ 2.02
SNX17-202ENST00000427123 ITSN2Q9NZM3 1697 aa27.66■■■□□ 2.02
SNX17-202ENST00000427123 PLB1Q6P1J6 1458 aa27.65■■■□□ 2.02
SNX17-202ENST00000427123 PPP1R15AO75807 674 aaPredicted RBP27.64■■■□□ 2.02
SNX17-202ENST00000427123 TONSLQ96HA7 1378 aa27.64■■■□□ 2.02
SNX17-202ENST00000427123 RRP7BPQ9NSQ0 103 aa27.63■■■□□ 2.01
SNX17-202ENST00000427123 DAPK1P53355 1430 aa27.63■■■□□ 2.01
SNX17-202ENST00000427123 KDM6BO15054 1643 aa27.63■■■□□ 2.01
SNX17-202ENST00000427123 ROCK1Q13464 1354 aa27.62■■■□□ 2.01
SNX17-202ENST00000427123 JPH4Q96JJ6 628 aa27.61■■■□□ 2.01
SNX17-202ENST00000427123 CHIC2Q9UKJ5 165 aa27.61■■■□□ 2.01
SNX17-202ENST00000427123 GTF3C3Q9Y5Q9 886 aa27.59■■■□□ 2.01
SNX17-202ENST00000427123 PRG4Q92954 1404 aaPredicted RBP27.58■■■□□ 2.01
SNX17-202ENST00000427123 ABCA8O94911 1581 aa27.58■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms