RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 CARMIL1Q5VZK9 1371 aa29■■■□□ 2.23
LIMS2-211ENST00000426981 PRG4Q92954 1404 aaPredicted RBP28.98■■■□□ 2.23
LIMS2-211ENST00000426981 TRHP20396 242 aaPredicted RBP28.94■■■□□ 2.22
LIMS2-211ENST00000426981 KIAA0586Q9BVV6 1533 aa28.89■■■□□ 2.22
LIMS2-211ENST00000426981 CHIC1Q5VXU3 224 aa28.81■■■□□ 2.2
LIMS2-211ENST00000426981 RAPGEF2Q9Y4G8 1499 aa28.76■■■□□ 2.19
LIMS2-211ENST00000426981 IQGAP2Q13576 1575 aa28.68■■■□□ 2.18
LIMS2-211ENST00000426981 TTBK1Q5TCY1 1321 aaPredicted RBP28.67■■■□□ 2.18
LIMS2-211ENST00000426981 ADCY10Q96PN6 1610 aa28.61■■■□□ 2.17
LIMS2-211ENST00000426981 PRXQ9BXM0 1461 aa28.59■■■□□ 2.17
LIMS2-211ENST00000426981 HRCP23327 699 aa28.57■■■□□ 2.16
LIMS2-211ENST00000426981 DISP1Q96F81 1524 aa28.57■■■□□ 2.16
LIMS2-211ENST00000426981 PTPRGP23470 1445 aa28.56■■■□□ 2.16
LIMS2-211ENST00000426981 CARMIL2Q6F5E8 1435 aa28.55■■■□□ 2.16
LIMS2-211ENST00000426981 TNIKQ9UKE5 1360 aa28.53■■■□□ 2.16
LIMS2-211ENST00000426981 UGGT2Q9NYU1 1516 aa28.52■■■□□ 2.16
LIMS2-211ENST00000426981 CTTNBP2Q8WZ74 1663 aa28.5■■■□□ 2.15
LIMS2-211ENST00000426981 CSRNP3Q8WYN3 585 aa28.5■■■□□ 2.15
LIMS2-211ENST00000426981 NPM1P06748 294 aaKnown RBP eCLIP28.48■■■□□ 2.15
LIMS2-211ENST00000426981 FAM9AQ8IZU1 332 aaPredicted RBP28.48■■■□□ 2.15
LIMS2-211ENST00000426981 KIF13AQ9H1H9 1805 aa28.47■■■□□ 2.15
LIMS2-211ENST00000426981 KIAA0556O60303 1618 aa28.44■■■□□ 2.14
LIMS2-211ENST00000426981 MAPKBP1O60336 1514 aa28.4■■■□□ 2.14
LIMS2-211ENST00000426981 FAM69CQ0P6D2 419 aa28.37■■■□□ 2.13
LIMS2-211ENST00000426981 UACAQ9BZF9 1416 aa28.36■■■□□ 2.13
LIMS2-211ENST00000426981 ABCC10Q5T3U5 1492 aa28.35■■■□□ 2.13
LIMS2-211ENST00000426981 EEA1Q15075 1411 aa28.33■■■□□ 2.13
LIMS2-211ENST00000426981 ABCC2Q92887 1545 aa28.33■■■□□ 2.13
LIMS2-211ENST00000426981 DIP2BQ9P265 1576 aa28.32■■■□□ 2.12
LIMS2-211ENST00000426981 UHRF1BP1LA0JNW5 1464 aa28.31■■■□□ 2.12
LIMS2-211ENST00000426981 P3H3Q8IVL6 736 aa28.27■■■□□ 2.12
LIMS2-211ENST00000426981 GOLGA3Q08378 1498 aa28.26■■■□□ 2.11
LIMS2-211ENST00000426981 PLB1Q6P1J6 1458 aa28.26■■■□□ 2.11
LIMS2-211ENST00000426981 ASXL2Q76L83 1435 aa28.24■■■□□ 2.11
LIMS2-211ENST00000426981 EHMT2Q96KQ7 1210 aa28.22■■■□□ 2.11
LIMS2-211ENST00000426981 RANGAP1P46060 587 aaPredicted RBP28.21■■■□□ 2.11
LIMS2-211ENST00000426981 KDM5BQ9UGL1 1544 aa28.2■■■□□ 2.11
LIMS2-211ENST00000426981 ZCCHC11Q5TAX3 1644 aaKnown RBP28.19■■■□□ 2.1
LIMS2-211ENST00000426981 TSPOAP1O95153 1857 aa28.18■■■□□ 2.1
LIMS2-211ENST00000426981 ABCA8O94911 1581 aa28.16■■■□□ 2.1
LIMS2-211ENST00000426981 KIF21BO75037 1637 aa28.15■■■□□ 2.1
LIMS2-211ENST00000426981 SAMD9Q5K651 1589 aa28.13■■■□□ 2.09
LIMS2-211ENST00000426981 ARID3CA6NKF2 412 aa28.09■■■□□ 2.09
LIMS2-211ENST00000426981 EPRSP07814 1512 aaKnown RBP28.06■■■□□ 2.08
LIMS2-211ENST00000426981 GLI2P10070 1586 aa28.04■■■□□ 2.08
LIMS2-211ENST00000426981 FHOD3Q2V2M9 1422 aa28.03■■■□□ 2.08
LIMS2-211ENST00000426981 PPRC1Q5VV67 1664 aaKnown RBP28.02■■■□□ 2.08
LIMS2-211ENST00000426981 PCGF6Q9BYE7 350 aa28.01■■■□□ 2.08
LIMS2-211ENST00000426981 WDR7Q9Y4E6 1490 aa27.99■■■□□ 2.07
LIMS2-211ENST00000426981 UBTFP17480 764 aaKnown RBP27.99■■■□□ 2.07
LIMS2-211ENST00000426981 KCNH8Q96L42 1107 aa27.96■■■□□ 2.07
LIMS2-211ENST00000426981 ATP10BO94823 1461 aa27.96■■■□□ 2.07
LIMS2-211ENST00000426981 KDM6BO15054 1643 aa27.95■■■□□ 2.06
LIMS2-211ENST00000426981 MAP3K4Q9Y6R4 1608 aa27.94■■■□□ 2.06
LIMS2-211ENST00000426981 RAPGEF6Q8TEU7 1601 aa27.93■■■□□ 2.06
LIMS2-211ENST00000426981 NUP153P49790 1475 aaKnown RBP27.86■■■□□ 2.05
LIMS2-211ENST00000426981 EFCAB5A4FU69 1503 aa27.86■■■□□ 2.05
LIMS2-211ENST00000426981 TRIM26Q12899 539 aaPredicted RBP27.84■■■□□ 2.05
LIMS2-211ENST00000426981 COL17A1Q9UMD9 1497 aaPredicted RBP27.84■■■□□ 2.05
LIMS2-211ENST00000426981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.82■■■□□ 2.04
LIMS2-211ENST00000426981 HNRNPUL2Q1KMD3 747 aaKnown RBP27.82■■■□□ 2.04
LIMS2-211ENST00000426981 ARHGAP35Q9NRY4 1499 aa27.8■■■□□ 2.04
LIMS2-211ENST00000426981 CD109Q6YHK3 1445 aa27.8■■■□□ 2.04
LIMS2-211ENST00000426981 CFAP43Q8NDM7 1665 aa27.77■■■□□ 2.04
LIMS2-211ENST00000426981 TEX14Q8IWB6 1497 aa27.75■■■□□ 2.03
LIMS2-211ENST00000426981 ZEB1P37275 1124 aaPredicted RBP27.74■■■□□ 2.03
LIMS2-211ENST00000426981 MAGI3Q5TCQ9 1506 aa27.72■■■□□ 2.03
LIMS2-211ENST00000426981 AEBP2Q6ZN18 517 aaPredicted RBP27.69■■■□□ 2.02
LIMS2-211ENST00000426981 CDK13Q14004 1512 aaKnown RBP27.68■■■□□ 2.02
LIMS2-211ENST00000426981 ATP1B4Q9UN42 357 aaPredicted RBP27.67■■■□□ 2.02
LIMS2-211ENST00000426981 ABCA9Q8IUA7 1624 aa27.67■■■□□ 2.02
LIMS2-211ENST00000426981 PLEKHD1A6NEE1 506 aa27.63■■■□□ 2.01
LIMS2-211ENST00000426981 FMN1Q68DA7 1419 aa27.62■■■□□ 2.01
LIMS2-211ENST00000426981 LOC105371045A0A1W2PR82 267 aa27.6■■■□□ 2.01
LIMS2-211ENST00000426981 KDM4FA0A1W2PPD8 638 aa27.58■■■□□ 2
LIMS2-211ENST00000426981 HECW1Q76N89 1606 aa27.55■■■□□ 2
LIMS2-211ENST00000426981 LRRIQ1Q96JM4 1722 aa27.54■■■□□ 2
LIMS2-211ENST00000426981 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.53■■■□□ 2
LIMS2-211ENST00000426981 TTC37Q6PGP7 1564 aa27.49■■□□□ 1.99
LIMS2-211ENST00000426981 ARAP3Q8WWN8 1544 aa27.49■■□□□ 1.99
LIMS2-211ENST00000426981 CLIP1P30622 1438 aa27.48■■□□□ 1.99
LIMS2-211ENST00000426981 PCF11O94913 1555 aaKnown RBP27.47■■□□□ 1.99
LIMS2-211ENST00000426981 RAPGEF3O95398 923 aa27.46■■□□□ 1.99
LIMS2-211ENST00000426981 NEO1Q92859 1461 aa27.43■■□□□ 1.98
LIMS2-211ENST00000426981 CASKIN1Q8WXD9 1431 aa27.41■■□□□ 1.98
LIMS2-211ENST00000426981 KIF14Q15058 1648 aa27.41■■□□□ 1.98
LIMS2-211ENST00000426981 PHLDB1Q86UU1 1377 aa27.4■■□□□ 1.98
LIMS2-211ENST00000426981 ADGRL1O94910 1474 aa27.39■■□□□ 1.98
LIMS2-211ENST00000426981 FRMPD1Q5SYB0 1578 aa27.37■■□□□ 1.97
LIMS2-211ENST00000426981 FANCAO15360 1455 aa27.37■■□□□ 1.97
LIMS2-211ENST00000426981 TROQ12816 1431 aaPredicted RBP27.36■■□□□ 1.97
LIMS2-211ENST00000426981 AKNAQ7Z591 1439 aa27.36■■□□□ 1.97
LIMS2-211ENST00000426981 CDK11AQ9UQ88 783 aaPredicted RBP27.36■■□□□ 1.97
LIMS2-211ENST00000426981 PLCH2O75038 1416 aa27.32■■□□□ 1.96
LIMS2-211ENST00000426981 PPARGC1BQ86YN6 1023 aaKnown RBP27.32■■□□□ 1.96
LIMS2-211ENST00000426981 FYCO1Q9BQS8 1478 aa27.3■■□□□ 1.96
LIMS2-211ENST00000426981 CEP162Q5TB80 1403 aa27.29■■□□□ 1.96
LIMS2-211ENST00000426981 DENND4BO75064 1496 aaPredicted RBP27.29■■□□□ 1.96
LIMS2-211ENST00000426981 RICTORQ6R327 1708 aa27.28■■□□□ 1.96
LIMS2-211ENST00000426981 CCDC18Q5T9S5 1454 aa27.28■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms