RNA–Protein interactions for RNA: ENST00000426981.5

LIMS2-211, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 1,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-211ENST00000426981 NISCHQ9Y2I1 1504 aa41.68■■■■■ 4.26
LIMS2-211ENST00000426981 CCDC180Q9P1Z9 1646 aa37.12■■■■□ 3.53
LIMS2-211ENST00000426981 ABCC9O60706 1549 aa36.83■■■■□ 3.49
LIMS2-211ENST00000426981 RB1CC1Q8TDY2 1594 aa35.12■■■■□ 3.21
LIMS2-211ENST00000426981 DCAF8L2P0C7V8 631 aa35.1■■■■□ 3.21
LIMS2-211ENST00000426981 NACADO15069 1562 aa34.98■■■■□ 3.19
LIMS2-211ENST00000426981 ZCCHC6Q5VYS8 1495 aaKnown RBP34.64■■■■□ 3.14
LIMS2-211ENST00000426981 MYO15BQ96JP2 1530 aa34.6■■■■□ 3.13
LIMS2-211ENST00000426981 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
LIMS2-211ENST00000426981 PABPN1Q86U42 306 aaKnown RBP eCLIP34.42■■■■□ 3.1
LIMS2-211ENST00000426981 DCAF1Q9Y4B6 1507 aa34.37■■■■□ 3.09
LIMS2-211ENST00000426981 DNAJC5BQ9UF47 199 aa34.22■■■■□ 3.07
LIMS2-211ENST00000426981 BICRAQ9NZM4 1560 aa34.19■■■■□ 3.06
LIMS2-211ENST00000426981 SCRIBQ14160 1630 aa34■■■■□ 3.03
LIMS2-211ENST00000426981 SHROOM4Q9ULL8 1493 aa33.54■■■□□ 2.96
LIMS2-211ENST00000426981 EIF4G1Q04637 1599 aaKnown RBP33.27■■■□□ 2.92
LIMS2-211ENST00000426981 CC2D2AQ9P2K1 1620 aa33.24■■■□□ 2.91
LIMS2-211ENST00000426981 CECR2Q9BXF3 1484 aa33.06■■■□□ 2.88
LIMS2-211ENST00000426981 SMARCA4P51532 1647 aa32.42■■■□□ 2.78
LIMS2-211ENST00000426981 ATAD2BQ9ULI0 1458 aa32.34■■■□□ 2.77
LIMS2-211ENST00000426981 NCAPD3P42695 1498 aa32.32■■■□□ 2.76
LIMS2-211ENST00000426981 BAZ1AQ9NRL2 1556 aaPredicted RBP32.28■■■□□ 2.76
LIMS2-211ENST00000426981 SMARCA2P51531 1590 aa32.2■■■□□ 2.74
LIMS2-211ENST00000426981 MROH2BQ7Z745 1585 aa32.2■■■□□ 2.74
LIMS2-211ENST00000426981 HMGXB3Q12766 1538 aa32.1■■■□□ 2.73
LIMS2-211ENST00000426981 PEG3Q9GZU2 1588 aa32.04■■■□□ 2.72
LIMS2-211ENST00000426981 BAZ1BQ9UIG0 1483 aaKnown RBP32.03■■■□□ 2.72
LIMS2-211ENST00000426981 WIZO95785 1651 aa31.85■■■□□ 2.69
LIMS2-211ENST00000426981 NESP48681 1621 aa31.81■■■□□ 2.68
LIMS2-211ENST00000426981 ERCC6Q03468 1493 aa31.67■■■□□ 2.66
LIMS2-211ENST00000426981 RSF1Q96T23 1441 aaPredicted RBP31.67■■■□□ 2.66
LIMS2-211ENST00000426981 LAMC3Q9Y6N6 1575 aa31.5■■■□□ 2.63
LIMS2-211ENST00000426981 CUX2O14529 1486 aa31.39■■■□□ 2.62
LIMS2-211ENST00000426981 CADPSQ9ULU8 1353 aa31.39■■■□□ 2.61
LIMS2-211ENST00000426981 TOP2AP11388 1531 aaKnown RBP31.38■■■□□ 2.61
LIMS2-211ENST00000426981 KIF21AQ7Z4S6 1674 aa31.36■■■□□ 2.61
LIMS2-211ENST00000426981 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
LIMS2-211ENST00000426981 PDS5BQ9NTI5 1447 aa31.29■■■□□ 2.6
LIMS2-211ENST00000426981 CFTRP13569 1480 aa31.12■■■□□ 2.57
LIMS2-211ENST00000426981 CCDC88BA6NC98 1476 aa31.08■■■□□ 2.57
LIMS2-211ENST00000426981 FANCD2Q9BXW9 1451 aa31.04■■■□□ 2.56
LIMS2-211ENST00000426981 MRC2Q9UBG0 1479 aa31.03■■■□□ 2.56
LIMS2-211ENST00000426981 CEP164Q9UPV0 1460 aa31.01■■■□□ 2.55
LIMS2-211ENST00000426981 WDR62O43379 1518 aa30.94■■■□□ 2.54
LIMS2-211ENST00000426981 DNAJC5Q9H3Z4 198 aa30.93■■■□□ 2.54
LIMS2-211ENST00000426981 PRDM2Q13029 1718 aa30.83■■■□□ 2.53
LIMS2-211ENST00000426981 URB2Q14146 1524 aaKnown RBP30.81■■■□□ 2.52
LIMS2-211ENST00000426981 SUPT5HO00267 1087 aaKnown RBP30.72■■■□□ 2.51
LIMS2-211ENST00000426981 TOPBP1Q92547 1522 aa30.53■■■□□ 2.48
LIMS2-211ENST00000426981 DNMBPQ6XZF7 1577 aa30.41■■■□□ 2.46
LIMS2-211ENST00000426981 ZNF608Q9ULD9 1512 aaPredicted RBP30.38■■■□□ 2.45
LIMS2-211ENST00000426981 ABCC8Q09428 1581 aa30.36■■■□□ 2.45
LIMS2-211ENST00000426981 IFT140Q96RY7 1462 aa30.35■■■□□ 2.45
LIMS2-211ENST00000426981 POLA1P09884 1462 aaPredicted RBP30.25■■■□□ 2.43
LIMS2-211ENST00000426981 TARBP1Q13395 1621 aaKnown RBP30.22■■■□□ 2.43
LIMS2-211ENST00000426981 CUX1P39880 1505 aa30.21■■■□□ 2.43
LIMS2-211ENST00000426981 RAD54L2Q9Y4B4 1467 aa30.19■■■□□ 2.42
LIMS2-211ENST00000426981 EIF4G3O43432 1585 aaKnown RBP30.17■■■□□ 2.42
LIMS2-211ENST00000426981 AQRO60306 1485 aaKnown RBP eCLIP30.16■■■□□ 2.42
LIMS2-211ENST00000426981 FGD5Q6ZNL6 1462 aa30.14■■■□□ 2.42
LIMS2-211ENST00000426981 SOGA1O94964 1423 aa30.12■■■□□ 2.41
LIMS2-211ENST00000426981 OSCARQ8IYS5 282 aa30.11■■■□□ 2.41
LIMS2-211ENST00000426981 TDRD9Q8NDG6 1382 aaKnown RBP30.04■■■□□ 2.4
LIMS2-211ENST00000426981 CHD1O14646 1710 aa29.89■■■□□ 2.37
LIMS2-211ENST00000426981 WDR97A6NE52 1622 aa29.88■■■□□ 2.37
LIMS2-211ENST00000426981 FBLN2P98095 1184 aa29.86■■■□□ 2.37
LIMS2-211ENST00000426981 TRIM41Q8WV44 630 aa29.86■■■□□ 2.37
LIMS2-211ENST00000426981 SYNJ1O43426 1573 aa29.85■■■□□ 2.37
LIMS2-211ENST00000426981 WRNQ14191 1432 aaPredicted RBP eCLIP29.83■■■□□ 2.37
LIMS2-211ENST00000426981 SNAPC4Q5SXM2 1469 aa29.82■■■□□ 2.36
LIMS2-211ENST00000426981 TOP2BQ02880 1626 aa29.79■■■□□ 2.36
LIMS2-211ENST00000426981 BIVM-ERCC5R4GMW8 1640 aa29.79■■■□□ 2.36
LIMS2-211ENST00000426981 ABCA10Q8WWZ4 1543 aa29.77■■■□□ 2.36
LIMS2-211ENST00000426981 GRIN2BQ13224 1484 aa29.75■■■□□ 2.35
LIMS2-211ENST00000426981 GAPVD1Q14C86 1478 aa29.74■■■□□ 2.35
LIMS2-211ENST00000426981 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
LIMS2-211ENST00000426981 RIMBP3CA6NJZ7 1639 aa29.7■■■□□ 2.35
LIMS2-211ENST00000426981 RIMBP3BA6NNM3 1639 aa29.7■■■□□ 2.35
LIMS2-211ENST00000426981 ABCA5Q8WWZ7 1642 aa29.7■■■□□ 2.35
LIMS2-211ENST00000426981 RIMBP3Q9UFD9 1639 aa29.7■■■□□ 2.35
LIMS2-211ENST00000426981 MAGI1Q96QZ7 1491 aaPredicted RBP29.68■■■□□ 2.34
LIMS2-211ENST00000426981 CHMP7Q8WUX9 453 aaPredicted RBP29.66■■■□□ 2.34
LIMS2-211ENST00000426981 ARHGEF11O15085 1522 aa29.64■■■□□ 2.34
LIMS2-211ENST00000426981 SYNJ2O15056 1496 aa29.6■■■□□ 2.33
LIMS2-211ENST00000426981 CLASP1Q7Z460 1538 aa29.52■■■□□ 2.32
LIMS2-211ENST00000426981 CYB5RLQ6IPT4 315 aa29.45■■■□□ 2.3
LIMS2-211ENST00000426981 ADAMTS12P58397 1594 aa29.44■■■□□ 2.3
LIMS2-211ENST00000426981 ARAP1Q96P48 1450 aa29.41■■■□□ 2.3
LIMS2-211ENST00000426981 GRIN2AQ12879 1464 aa29.4■■■□□ 2.3
LIMS2-211ENST00000426981 ERICH3Q5RHP9 1530 aa29.38■■■□□ 2.29
LIMS2-211ENST00000426981 FHAD1B1AJZ9 1412 aa29.36■■■□□ 2.29
LIMS2-211ENST00000426981 CEP170Q5SW79 1584 aa29.31■■■□□ 2.28
LIMS2-211ENST00000426981 NUP160Q12769 1436 aa29.28■■■□□ 2.28
LIMS2-211ENST00000426981 ERCC6L2Q5T890 1561 aa29.21■■■□□ 2.27
LIMS2-211ENST00000426981 IGF1RP08069 1367 aa29.2■■■□□ 2.27
LIMS2-211ENST00000426981 KIF27Q86VH2 1401 aa29.2■■■□□ 2.26
LIMS2-211ENST00000426981 SHROOM2Q13796 1616 aa29.08■■■□□ 2.25
LIMS2-211ENST00000426981 CUL7Q14999 1698 aa29.03■■■□□ 2.24
LIMS2-211ENST00000426981 RUSC2Q8N2Y8 1516 aa29.02■■■□□ 2.24
LIMS2-211ENST00000426981 JPH4Q96JJ6 628 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 230.6 ms